Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G135500.1 | Wheat | nucleus | 87.65 | 93.77 |
| TraesCS7D01G135600.1 | Wheat | nucleus | 76.92 | 92.7 |
| TraesCS7D01G135700.1 | Wheat | nucleus | 92.07 | 90.8 |
| TraesCS7B01G036700.1 | Wheat | nucleus | 89.28 | 89.49 |
| TraesCS7D01G135300.1 | Wheat | nucleus | 87.88 | 87.67 |
| TraesCS7B01G036500.1 | Wheat | nucleus | 85.31 | 85.12 |
| TraesCS7D01G135000.1 | Wheat | nucleus | 82.28 | 82.09 |
| HORVU7Hr1G028140.1 | Barley | nucleus | 31.7 | 62.96 |
| TraesCS1D01G362000.1 | Wheat | nucleus | 34.73 | 49.01 |
| Zm00001d006791_P001 | Maize | nucleus | 14.92 | 41.83 |
| KXG21281 | Sorghum | nucleus | 16.32 | 40.46 |
| TraesCS7D01G189800.2 | Wheat | nucleus | 17.72 | 38.38 |
| Zm00001d050594_P001 | Maize | nucleus | 18.18 | 36.97 |
| TraesCS7D01G108000.1 | Wheat | nucleus | 22.61 | 35.4 |
| TraesCS7D01G118600.1 | Wheat | nucleus | 21.91 | 34.31 |
| EES18995 | Sorghum | nucleus | 20.98 | 32.61 |
| Zm00001d024809_P001 | Maize | nucleus | 21.68 | 32.52 |
| TraesCS7D01G108100.1 | Wheat | nucleus | 20.28 | 31.87 |
| EES18996 | Sorghum | nucleus | 20.51 | 30.56 |
| EER89573 | Sorghum | nucleus | 21.91 | 29.75 |
| OQU76057 | Sorghum | nucleus | 21.21 | 29.64 |
| EER89299 | Sorghum | nucleus | 20.98 | 29.41 |
| Zm00001d045162_P001 | Maize | nucleus | 19.81 | 29.31 |
| EER88198 | Sorghum | nucleus | 21.68 | 29.25 |
| Zm00001d010889_P001 | Maize | plastid | 16.08 | 28.63 |
| EER88196 | Sorghum | nucleus | 20.98 | 28.48 |
| Zm00001d024814_P001 | Maize | nucleus | 18.41 | 28.11 |
| OQU77390 | Sorghum | nucleus | 15.38 | 27.05 |
| KXG21283 | Sorghum | nucleus | 15.38 | 27.05 |
| EER89387 | Sorghum | nucleus | 19.81 | 26.73 |
| EER94504 | Sorghum | nucleus | 17.72 | 26.39 |
| KXG21280 | Sorghum | nucleus | 20.98 | 25.28 |
| Os06t0173800-00 | Rice | vacuole | 17.02 | 22.32 |
| OQU77389 | Sorghum | nucleus | 17.25 | 22.16 |
| EES18997 | Sorghum | nucleus | 19.11 | 21.81 |
| TraesCS2D01G567700.1 | Wheat | nucleus | 18.18 | 20.63 |
| Zm00001d024810_P001 | Maize | nucleus | 18.65 | 20.51 |
| KXG21278 | Sorghum | nucleus | 15.85 | 19.77 |
| PGSC0003DMT400086891 | Potato | nucleus | 9.09 | 18.06 |
| Solyc02g082380.1.1 | Tomato | nucleus | 9.09 | 17.57 |
| Solyc02g082390.1.1 | Tomato | nucleus | 9.79 | 14.95 |
| PGSC0003DMT400091980 | Potato | nucleus | 10.02 | 10.67 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR44042 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | EnsemblPlantsGene:TraesCS7D01G135200 |
| EnsemblPlants:TraesCS7D01G135200.1 | TIGR:cd00167 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7D:-:86765762..86768027
Molecular Weight (calculated)
48299.7 Da
IEP (calculated)
6.024
GRAVY (calculated)
-0.619
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPIVNQGWT SSEVEEASSL IARLNTNKIM YDDNDDKNKK HNYIVNSLHA LFPSKTMKQV TNRYIDLAVE MHMIQRREGT HVTSGSPQNI FTFCDPVNGN
101: YELPMEENGA SSTHGIYTMG DHANENFGIR EEATIMDNNG LSFGCAMENT GITVTGEAPL MADNNKMKVL ENNISIDQPV VAPHQRGFWT DEEHSMGGLV
201: NENFEVQEDE GTTMDDNGFS FRCALEDTRI RKTEEAPMMV NKNKMVVLES NTSIDRPAVA AHQRKFWTKE EHKSFLYGLE VYGRGDWKNI SKHFVTTKTP
301: VQVSSHAQKF FKRIERKALS GTKRYSINDV RLHDNELLAA NNSSAPRQTL SFASLYNDPS FRLQAPTSSF AVMNNLAQCS PSIYNQQVGQ QPMWREQQMM
401: GSTAAVMGRV GNYVPDGQHG SAYFYLGNV
101: YELPMEENGA SSTHGIYTMG DHANENFGIR EEATIMDNNG LSFGCAMENT GITVTGEAPL MADNNKMKVL ENNISIDQPV VAPHQRGFWT DEEHSMGGLV
201: NENFEVQEDE GTTMDDNGFS FRCALEDTRI RKTEEAPMMV NKNKMVVLES NTSIDRPAVA AHQRKFWTKE EHKSFLYGLE VYGRGDWKNI SKHFVTTKTP
301: VQVSSHAQKF FKRIERKALS GTKRYSINDV RLHDNELLAA NNSSAPRQTL SFASLYNDPS FRLQAPTSSF AVMNNLAQCS PSIYNQQVGQ QPMWREQQMM
401: GSTAAVMGRV GNYVPDGQHG SAYFYLGNV
001: MEVMRPSTSH VSGGNWLMEE TKSGVAASGE GATWTAAENK AFENALAVYD DNTPDRWQKV AAVIPGKTVS DVIRQYNDLE ADVSSIEAGL IPVPGYITSP
101: PFTLDWAGGG GGCNGFKPGH QVCNKRSQAG RSPELERKKG VPWTEEEHKL FLMGLKKYGK GDWRNISRNF VITRTPTQVA SHAQKYFIRQ LSGGKDKRRA
201: SIHDITTVNL EEEASLETNK SSIVVGDQRS RLTAFPWNQT DNNGTQADAF NITIGNAISG VHSYGQVMIG GYNNADSCYD AQNTMFQL
101: PFTLDWAGGG GGCNGFKPGH QVCNKRSQAG RSPELERKKG VPWTEEEHKL FLMGLKKYGK GDWRNISRNF VITRTPTQVA SHAQKYFIRQ LSGGKDKRRA
201: SIHDITTVNL EEEASLETNK SSIVVGDQRS RLTAFPWNQT DNNGTQADAF NITIGNAISG VHSYGQVMIG GYNNADSCYD AQNTMFQL
Arabidopsis Description
Homeodomain-like transcriptional regulator [Source:UniProtKB/TrEMBL;Acc:Q9FIL9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.