Subcellular Localization
min:
: max
Winner_takes_all: plastid, plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G151100.1 | Wheat | plastid | 97.96 | 97.86 |
| TraesCS7B01G055100.1 | Wheat | cytosol, plasma membrane, plastid | 97.5 | 97.4 |
| HORVU7Hr1G031100.1 | Barley | cytosol | 96.08 | 96.03 |
| Os10t0154600-01 | Rice | peroxisome, plasma membrane, plastid | 26.25 | 79.72 |
| OQU82713 | Sorghum | plastid | 71.15 | 71.19 |
| Zm00001d030340_P037 | Maize | plasma membrane | 62.39 | 68.11 |
| Zm00001d030342_P001 | Maize | plastid | 4.64 | 63.64 |
| GSMUA_Achr11P... | Banana | cytosol | 14.58 | 50.18 |
| VIT_03s0038g01880.t01 | Wine grape | cytosol | 10.3 | 43.44 |
| PGSC0003DMT400056702 | Potato | endoplasmic reticulum, extracellular, plastid | 1.48 | 43.28 |
| Solyc11g039890.1.1 | Tomato | cytosol | 3.62 | 42.52 |
| Solyc11g039880.1.1 | Tomato | nucleus | 15.49 | 40.97 |
| VIT_03s0038g01920.t01 | Wine grape | plasma membrane | 26.15 | 38.51 |
| AT4G38760.1 | Thale cress | cytosol | 37.05 | 37.0 |
| KRH24149 | Soybean | nucleus | 37.0 | 36.93 |
| GSMUA_Achr11P... | Banana | plasma membrane | 24.82 | 36.67 |
| CDX72740 | Canola | cytosol | 36.65 | 36.52 |
| CDY22413 | Canola | cytosol | 32.67 | 36.46 |
| Bra033575.1-P | Field mustard | cytosol | 36.39 | 35.86 |
| VIT_03s0038g01870.t01 | Wine grape | cytosol | 1.99 | 35.78 |
| KRH29119 | Soybean | mitochondrion | 7.85 | 35.08 |
| Solyc11g039870.1.1 | Tomato | nucleus | 17.28 | 30.76 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G153000.1 | EnsemblPlantsGene:TraesCS7D01G153000 | GO:GO:0003674 | GO:GO:0005198 | GO:GO:0017056 | InterPro:Nucleoporin_Nup188 |
| PANTHER:PTHR31431 | PFAM:PF10487 | SEG:seg | MapMan:23.5.1.1.2.2 | : | : |
Description
No Description!
Coordinates
chr7D:+:101467993..101474981
Molecular Weight (calculated)
216586.0 Da
IEP (calculated)
5.954
GRAVY (calculated)
0.140
Length
1962 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASGGAPAST SGAGGGAGTK TVSASLWWDP FVALCDDLDR AAASPSAAVS DALAERIKGH HEWLRGAVSM FGKPNGASRA ALDAGQVAVG EHRLAVKPDL
0101: KEAALRASKS LDLDEVQSYI LVKRSSESAP TTRDADPQEL LRRVSLQYYL ERQCLLKCIR RIFVHATCTD DDSDSSDAIK QEASLLGSDE MERRLLSIIK
0201: DSLAAAFSVK SAADLTVSWL EESLIEINLI LDILFLAICD NFSRCNGGLW IALCSLFRDM LSGSYDVGKF AVSAEAKRSF HYAKAQLLLI LIETLDLENL
0301: LRMVHDEVSF SGGYSQYSVA EILEMDIEVS RLPEFEVESG PLLLAWAVFH CLLLSLPGNN ANLEIDHASY AQRAFELAPF NYLLGVLCSS IFRESDGPVS
0401: GFRAVLRSFI SAFIASYEIS YQTEDSSLGV ILNIICEVYG GEESLCMQFW DKDSCVDGPI RSVLQMVEKE YPFQITDLLR FLSAVSYGTW PAQCVYNYLE
0501: RMNGLTTLYA TPGSVPDSLN YCDQIEIHHP ISIPGMEGIT LPRGTRGYIL RSLEDNAALV RWEFPHSGVF ILLLTLAQDL YSCNYVEACD IMDLLYQMVS
0601: SNQDLCSALL HADKSLAVQK SKSLGQIGEY IRIDVVKILC SSIFKYEQDG NNASIMSKTF SMLSEFLKCV PYRVFDVALE CGIFSSRLND PSSDWLLSGA
0701: LARMLFAASE ENGDCSSLTT SLLDFAIQVL RKGAAADDMI SPFIVFSIQY IMVNHMNWKH KKYSRWKTTL KVFELVKSCI QVKPFLSKLG GIIWQMLLYD
0801: SSIHSVLWHA VCTSMQLLES RGSFSNGVED IEDIQLVLCC GLDIIFFMLS NLPEDLMPVA PFVTLVLSSS LKPLPFITAT ILSMSFQNSA LQVSAARALS
0901: VLCFTAHRVQ PQLMENGSFL VDGSEICRLQ ASISQILNKE DDTNNCLIVA IFSLLTSVAR YQPALFVSLT EENAMIQADH SNSANSQTNG SSTLNSSRSN
1001: SRLVEQMLGY IENSTEFMNS SPSLLLSILD LLEALWESGV QFICILDKLR SSRTFWESLS RCIRGTFDHC PVDTVDEKVS SRYNCQAKIF KIMSHELFLK
1101: GRLLVEAKTS NPVADGTTGQ KEPSASSPSN AVCKWFDSAL LEDFINHLSS NGYQKELFHR AKVASCVCII RLITKLSTGD TASLSLSAVK KIQLISSKLL
1201: QHRAFIALLS QYALHGYSGE QELTSLVIND LYYHIHGELE GRQITPGPFQ ELLCFLLEFK FFECNATEQP HSAFPAVSGN VLFDVAHTRD DLGVKLWNHS
1301: DWKPCKEVAE KMLDIMHKAN LMKRHADAKL CTLRSFITFL SVYTGTSSSN ELTLPDGGIS ATAMESAIRC ACKYLQSTVD SLFPEVDTNE VLFPLLSGQV
1401: DLLLTLTRFL FHQAKQTKSY VHLYPVIVLL MRTSGASTSF LVDLVPSSPA LKKPVKSLLV LILSLFEFIY GKDDMKDGSG DANLFGESSI ISMRLLPVLC
1501: KLAENREYSD LAVGSMDLLL KGFIPPNVWL PILQKHFRLQ AILHKCQNGA ILSTQVILNF LLTLGRTKEG AKMLQSANIF AFLKVLLSKL SLDDSCFRNS
1601: LSSQAKDVHM WSLALAIVAS LNHCMDDDVS RSSVANGTVS FLAGQVPLMS SYLSAQSVNT HQNKKRAVLQ QSQTSLSALS LTENILSLLC VLAKYHFPRD
1701: TGMMQVDSEL REIIIHLLAF ISRGSARTGD SPNWNPSFCC PPIAKEEVVL HEDPPLIRSK HGWFRFAASS SLSTAAISAP SNAALSLVIR DKNSGDSGSV
1801: KQTRFTEMVA VQIYRIAFLI MKFLCSQAKE AVKRAGELEF VDLAHFPELP MPDILHGLQD QVVSIVTEVL GANGSSALSG ETDRVCRLLL VTLEASLYME
1901: LCVSQSCGIR PVLGRFEDFS KGIKAMLHAL EKHSSLKPLV RSLAQITTLL YPGLAQSNFL TM
0101: KEAALRASKS LDLDEVQSYI LVKRSSESAP TTRDADPQEL LRRVSLQYYL ERQCLLKCIR RIFVHATCTD DDSDSSDAIK QEASLLGSDE MERRLLSIIK
0201: DSLAAAFSVK SAADLTVSWL EESLIEINLI LDILFLAICD NFSRCNGGLW IALCSLFRDM LSGSYDVGKF AVSAEAKRSF HYAKAQLLLI LIETLDLENL
0301: LRMVHDEVSF SGGYSQYSVA EILEMDIEVS RLPEFEVESG PLLLAWAVFH CLLLSLPGNN ANLEIDHASY AQRAFELAPF NYLLGVLCSS IFRESDGPVS
0401: GFRAVLRSFI SAFIASYEIS YQTEDSSLGV ILNIICEVYG GEESLCMQFW DKDSCVDGPI RSVLQMVEKE YPFQITDLLR FLSAVSYGTW PAQCVYNYLE
0501: RMNGLTTLYA TPGSVPDSLN YCDQIEIHHP ISIPGMEGIT LPRGTRGYIL RSLEDNAALV RWEFPHSGVF ILLLTLAQDL YSCNYVEACD IMDLLYQMVS
0601: SNQDLCSALL HADKSLAVQK SKSLGQIGEY IRIDVVKILC SSIFKYEQDG NNASIMSKTF SMLSEFLKCV PYRVFDVALE CGIFSSRLND PSSDWLLSGA
0701: LARMLFAASE ENGDCSSLTT SLLDFAIQVL RKGAAADDMI SPFIVFSIQY IMVNHMNWKH KKYSRWKTTL KVFELVKSCI QVKPFLSKLG GIIWQMLLYD
0801: SSIHSVLWHA VCTSMQLLES RGSFSNGVED IEDIQLVLCC GLDIIFFMLS NLPEDLMPVA PFVTLVLSSS LKPLPFITAT ILSMSFQNSA LQVSAARALS
0901: VLCFTAHRVQ PQLMENGSFL VDGSEICRLQ ASISQILNKE DDTNNCLIVA IFSLLTSVAR YQPALFVSLT EENAMIQADH SNSANSQTNG SSTLNSSRSN
1001: SRLVEQMLGY IENSTEFMNS SPSLLLSILD LLEALWESGV QFICILDKLR SSRTFWESLS RCIRGTFDHC PVDTVDEKVS SRYNCQAKIF KIMSHELFLK
1101: GRLLVEAKTS NPVADGTTGQ KEPSASSPSN AVCKWFDSAL LEDFINHLSS NGYQKELFHR AKVASCVCII RLITKLSTGD TASLSLSAVK KIQLISSKLL
1201: QHRAFIALLS QYALHGYSGE QELTSLVIND LYYHIHGELE GRQITPGPFQ ELLCFLLEFK FFECNATEQP HSAFPAVSGN VLFDVAHTRD DLGVKLWNHS
1301: DWKPCKEVAE KMLDIMHKAN LMKRHADAKL CTLRSFITFL SVYTGTSSSN ELTLPDGGIS ATAMESAIRC ACKYLQSTVD SLFPEVDTNE VLFPLLSGQV
1401: DLLLTLTRFL FHQAKQTKSY VHLYPVIVLL MRTSGASTSF LVDLVPSSPA LKKPVKSLLV LILSLFEFIY GKDDMKDGSG DANLFGESSI ISMRLLPVLC
1501: KLAENREYSD LAVGSMDLLL KGFIPPNVWL PILQKHFRLQ AILHKCQNGA ILSTQVILNF LLTLGRTKEG AKMLQSANIF AFLKVLLSKL SLDDSCFRNS
1601: LSSQAKDVHM WSLALAIVAS LNHCMDDDVS RSSVANGTVS FLAGQVPLMS SYLSAQSVNT HQNKKRAVLQ QSQTSLSALS LTENILSLLC VLAKYHFPRD
1701: TGMMQVDSEL REIIIHLLAF ISRGSARTGD SPNWNPSFCC PPIAKEEVVL HEDPPLIRSK HGWFRFAASS SLSTAAISAP SNAALSLVIR DKNSGDSGSV
1801: KQTRFTEMVA VQIYRIAFLI MKFLCSQAKE AVKRAGELEF VDLAHFPELP MPDILHGLQD QVVSIVTEVL GANGSSALSG ETDRVCRLLL VTLEASLYME
1901: LCVSQSCGIR PVLGRFEDFS KGIKAMLHAL EKHSSLKPLV RSLAQITTLL YPGLAQSNFL TM
0001: MANPNSVDSS LWWDPFDSLL TDLENASLSD DLPQPIAKKL EENHAWFVGT LSMFKPPSEK SKEALNSDLV KIKEHQLVIK PQLKDKALRI SSHLNLDEIQ
0101: SYILVERSME QEYGTTDSVA QELTQEFIDM ILLQYYIQRQ CLLKCTKRIL IHALYAPREE SSIKEEAVKL ISDGLERRQS SVLEDLLSSC FPKNMDVNLF
0201: TLWAEETLIE DNLILDILFL IYNESYCSCN GERWRKLCSF YKGILSGSYN FSKLAVSVEA QHSACRVQIQ LLMILIETLD MENLLQMVHD GVPFRSGTCV
0301: FSIVDVQEMD ATISSLNTSE VNEAGPLVLA WAVFLCLISS LPGKEESPFL MDIDHVSYVH QAFEAASLSY FLEILQSNLL NDFDGPISGH RSVVRTFISA
0401: FIASYEINLQ LEDGTLELIL DILSKVYQGE ESLCCQFWDR KSFVDGPIRC LLFDLESEFP FRSAEFIRLL SSLSEGSWPA ECVYNFLDKS VGVSTLFDIT
0501: SDSPADDASQ LVETSRPLHI PGLEGLVIPS NTRGRILRVI SENTVLVRWE YSLSGIIVLI IRLANKLYIG NNREAFVTLE LLRRMVTFNK AVCFSLLNIS
0601: HFFYVQESYV NGKMESDVRV VDIICNSVRS LTFDSGGAAV MAMAIDILAK LLRCSPSSVA PMVLKSNIFD MTSCSDVPDS GYNISLSGSW SLSGKLAKMI
0701: LIDCEKNDTS CPLVISVLEF TMQLVEGGLE NDVVFALVVF SLQYILASHE YWKYNHGNMR WKVTLKVIEL MKTCLRFSKF STKLRDVLLD ILLNDASVHS
0801: ALFRIICTTT QNLENLCSSR FIEPAEIEGW QLAIVSVLDV LNVILSQFSE STHSGLPVFH QAMLSSTTKP ISVVAAITSL ISYFRNPTIQ VCAAQVLSKL
0901: FALAESSQLY IISNAGFGLD NKQITDLRNS VTQIVLDLSG QNEHLVVATL KLLTVAARFQ PALLVAIFDS DEDSDSSNVK QSRKDASSIP DWACKSRLLH
1001: TILQYVERAT DFVDRHTDIL LGLLDFLKTL WQEAGQYANM LEPFKASKKL WQEFSDIISQ ASKIKDSTVG SLGKEEISKL LVKYQCQASV LEIMACNMFL
1101: YKKLLFAESL KKPCVETKKT ASNGVSPPKL TWTADSDPKD IFSKWCDISV LDGIIQSVSS LDGESEINFQ AKVAAVLLIV HLIVKLETSG AGALSMVLVE
1201: KIKLISETLC AQPAFSELLA QYSKLGYSGG KELMPMIFSD LYCHLQGKLE GRDIPTGPFK ELFQFLVETS FWEKYKQKTN KDVNMALGDC LFDTQQIQTE
1301: LGIDIWDFSE WKTSKTTAEE MLNYMQRANS MVLLSTSQLS VLHALISVLI LYEDNSLEES AAAERKIPSR VTLLSIDKVC RKFCTTVDSL ASLWDAPKIV
1401: FDILTAQADL LSRLLKSAKK NLSLSVCALV LRNVGPGLKI LGSLRHSNAI LKKTINLLLE VLLLVVGFGS DNSNSSGMGH MVLAKDFAEI SDATIGLLPL
1501: LCNFMGNPEY LTLCLTTVDL ILRNFLTPET WFPIIQSQLR LQHVILQLQD KKSTTSVSAI LKFFLTIAQV HGGAQMLLNS GFFSTLRALL MEFPDGMSTL
1601: VSDNEKGSLL EKTEKTQHIW GIGLAVVTAM VHSLGSVSAG ADIVESVISY FFLEKGYMIS YYLAAPDFPS DDRDKVRLRS QRTWTSLAYL RVTEHTLLLL
1701: CALASHWRSW VKIMKDMDSP LREMTIHLLA FISKGAQRLR ESQSHISHLL CPPVAKEEFD SCKRPSFINT KHGWFSLAPL VCVGKPKITA VSISTALVVR
1801: GDTTEHPGSV PQSQFSDSVA IQIYRVASLL LKFLCLQAEG VVTRAEEVGY VDIAHFPELP EPEILHGLQD QATAIVAELC DNYKSKEIPD EVKKLCLMLI
1901: QTTEMSLYLE LCVVQVCRIH PVFGRVDNFS KDLKKLVKAA EVHTYLEPSI DSLKKIAAFL YPGSL
0101: SYILVERSME QEYGTTDSVA QELTQEFIDM ILLQYYIQRQ CLLKCTKRIL IHALYAPREE SSIKEEAVKL ISDGLERRQS SVLEDLLSSC FPKNMDVNLF
0201: TLWAEETLIE DNLILDILFL IYNESYCSCN GERWRKLCSF YKGILSGSYN FSKLAVSVEA QHSACRVQIQ LLMILIETLD MENLLQMVHD GVPFRSGTCV
0301: FSIVDVQEMD ATISSLNTSE VNEAGPLVLA WAVFLCLISS LPGKEESPFL MDIDHVSYVH QAFEAASLSY FLEILQSNLL NDFDGPISGH RSVVRTFISA
0401: FIASYEINLQ LEDGTLELIL DILSKVYQGE ESLCCQFWDR KSFVDGPIRC LLFDLESEFP FRSAEFIRLL SSLSEGSWPA ECVYNFLDKS VGVSTLFDIT
0501: SDSPADDASQ LVETSRPLHI PGLEGLVIPS NTRGRILRVI SENTVLVRWE YSLSGIIVLI IRLANKLYIG NNREAFVTLE LLRRMVTFNK AVCFSLLNIS
0601: HFFYVQESYV NGKMESDVRV VDIICNSVRS LTFDSGGAAV MAMAIDILAK LLRCSPSSVA PMVLKSNIFD MTSCSDVPDS GYNISLSGSW SLSGKLAKMI
0701: LIDCEKNDTS CPLVISVLEF TMQLVEGGLE NDVVFALVVF SLQYILASHE YWKYNHGNMR WKVTLKVIEL MKTCLRFSKF STKLRDVLLD ILLNDASVHS
0801: ALFRIICTTT QNLENLCSSR FIEPAEIEGW QLAIVSVLDV LNVILSQFSE STHSGLPVFH QAMLSSTTKP ISVVAAITSL ISYFRNPTIQ VCAAQVLSKL
0901: FALAESSQLY IISNAGFGLD NKQITDLRNS VTQIVLDLSG QNEHLVVATL KLLTVAARFQ PALLVAIFDS DEDSDSSNVK QSRKDASSIP DWACKSRLLH
1001: TILQYVERAT DFVDRHTDIL LGLLDFLKTL WQEAGQYANM LEPFKASKKL WQEFSDIISQ ASKIKDSTVG SLGKEEISKL LVKYQCQASV LEIMACNMFL
1101: YKKLLFAESL KKPCVETKKT ASNGVSPPKL TWTADSDPKD IFSKWCDISV LDGIIQSVSS LDGESEINFQ AKVAAVLLIV HLIVKLETSG AGALSMVLVE
1201: KIKLISETLC AQPAFSELLA QYSKLGYSGG KELMPMIFSD LYCHLQGKLE GRDIPTGPFK ELFQFLVETS FWEKYKQKTN KDVNMALGDC LFDTQQIQTE
1301: LGIDIWDFSE WKTSKTTAEE MLNYMQRANS MVLLSTSQLS VLHALISVLI LYEDNSLEES AAAERKIPSR VTLLSIDKVC RKFCTTVDSL ASLWDAPKIV
1401: FDILTAQADL LSRLLKSAKK NLSLSVCALV LRNVGPGLKI LGSLRHSNAI LKKTINLLLE VLLLVVGFGS DNSNSSGMGH MVLAKDFAEI SDATIGLLPL
1501: LCNFMGNPEY LTLCLTTVDL ILRNFLTPET WFPIIQSQLR LQHVILQLQD KKSTTSVSAI LKFFLTIAQV HGGAQMLLNS GFFSTLRALL MEFPDGMSTL
1601: VSDNEKGSLL EKTEKTQHIW GIGLAVVTAM VHSLGSVSAG ADIVESVISY FFLEKGYMIS YYLAAPDFPS DDRDKVRLRS QRTWTSLAYL RVTEHTLLLL
1701: CALASHWRSW VKIMKDMDSP LREMTIHLLA FISKGAQRLR ESQSHISHLL CPPVAKEEFD SCKRPSFINT KHGWFSLAPL VCVGKPKITA VSISTALVVR
1801: GDTTEHPGSV PQSQFSDSVA IQIYRVASLL LKFLCLQAEG VVTRAEEVGY VDIAHFPELP EPEILHGLQD QATAIVAELC DNYKSKEIPD EVKKLCLMLI
1901: QTTEMSLYLE LCVVQVCRIH PVFGRVDNFS KDLKKLVKAA EVHTYLEPSI DSLKKIAAFL YPGSL
Arabidopsis Description
Protein of unknown function (DUF3414) [Source:TAIR;Acc:AT4G38760]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.