Factsheet for TraesCS7D01G333900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 23128297
golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G345400.1	Wheat	cytosol	94.62	99.67
TraesCS7B01G237900.1	Wheat	cytosol	91.62	99.44
TraesCS6D01G183200.1	Wheat	cytosol, golgi	88.42	88.33
TraesCS5D01G186200.1	Wheat	cytosol	82.52	82.1
TraesCS3D01G295200.1	Wheat	cytosol	81.39	81.47
Zm00001d046170_P001	Maize	cytosol	81.7	81.44
EER89889	Sorghum	cytosol	79.11	74.42
TraesCS3D01G150500.1	Wheat	cytosol	75.28	72.58
Zm00001d024980_P001	Maize	cytosol	16.96	66.94
TraesCS3D01G005000.1	Wheat	cytosol	33.92	31.3

Protein Annotations

KEGG:00620+4.1.1.31	KEGG:00680+4.1.1.31	KEGG:00710+4.1.1.31	KEGG:00720+4.1.1.31	Gene3D:1.20.1440.90	MapMan:1.4.1.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0006091	GO:GO:0006099	GO:GO:0008150
GO:GO:0008152	GO:GO:0008964	GO:GO:0009987	GO:GO:0015977	HAMAP:MF_00595	InterPro:PEPCASE_His_AS
InterPro:PEP_COase	InterPro:PEP_COase_Lys_AS	InterPro:PEP_COase_bac/pln-type	PFAM:PF00311	PRINTS:PR00150	ScanProsite:PS00393
ScanProsite:PS00781	PANTHER:PTHR30523	PANTHER:PTHR30523:SF5	InterPro:Pyrv/PenolPyrv_Kinase-like_dom	SUPFAM:SSF51621	EnsemblPlantsGene:TraesCS7D01G333900
EnsemblPlants:TraesCS7D01G333900.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:425502865..425509711

Molecular Weight (calculated)

109621.0 Da

IEP (calculated)

5.813

GRAVY (calculated)

-0.374

Length

967 amino acids

Sequence
(BLAST)

001: MSSSSAAPME RHHSIDAQLR LLAPGKVSED DKLVEYDALL VDRFLDILQD LHGPHLREFV QDCYEVAAEY EGDRDAARLD ELGGRLTGLA PADSIVVASS
101: FSHMLNLANL AEEVQIANRR RNKLKRGDFA DEASATTESD IEETLKRLVS DLGKTREEVF DALKNQTVDL VFTAHPTQSI RRSLLQKHGR IRNCLRQLYA
201: KDITADDKQE LDEALQREIQ AAFRTDEIRR TQPTPQDEMR AGMSYFHETI WKGVPKFLRR VDTALKNIGI DERLPYNAPL IQFSSWMGGD RDGNPRVTPE
301: VTRDVCLLAR MMAANLHFSQ IEELMFELSM WRCNDELRVR AEELHRASRK AEKHYIEFWK QVPPTEPYRV ILGYVRDKLY YTRERSRHLL TSGSSDIPAD
401: STFTDVEQFL EPLELCYRSL CDCGDKTVAD GSLLDFLRQV STFGLSLVKL DIRQESDRHT DALDAITAHL GIGSYRSWPE EKRQEWLLSE LRGRRPLFGG
501: DLPMTEEVAD VLGTFRVLAE LPPDCFGAYI ISMATAPSDV LAVELLQREC HVGHPLRVVP LFEKLADLEA APAAVARLFS IDWYMDRIGG KQEVMIGYSD
601: SGKDAGRLSA AWQLYKAQEE LVKVAKQYGV KLTMFHGRGG TVGRGGGPTH LAILSQPPET VNGSLRVTVQ GEVIEHSFGE EHLCFRTLQR FTAATLEHGM
701: HPPVSPKPEW RALMDEMAVV ATEEYRAMVF KEPRFVEYFR SATPETEYGR MNIGSRPSKR KPSGGIETLR AIPWIFAWTQ TRFHLPVWLG FGAAFKHIMQ
801: KDIRNVQALR EMYNEWPFFR VTLDLLEMVF AKGDPGIAAL YDELLVADEL KPLGEQLRSN FEDTKKLLVQ VAGHRDVLED DPYLKQRLRL RDPYITTLNV
901: CQAYTLKRIR DPSFQVTAQP PLSKEFADEN QPASLVKLNA ASEYAPGLED TLILTMKGIA AGMQNTG

Best Arabidopsis Sequence Match ( AT2G42600.1 )
(BLAST)

001: MAARNLEKMA SIDAQLRLLA PGKVSEDDKL IEYDALLLDR FLDILQDLHG EDVREFVQEC YEVAADYDGN RNTEKLEELG NMLTSLDPGD SIVVTKSFSN
101: MLSLANLAEE VQIAYRRRIK KLKKGDFADE ASATTESDIE ETLKRLLQLN KTPEEVFDAL KNQTVDLVLT AHPTQSVRRS LLQKFGRIRD CLTQLYAKDI
201: TPDDKQELDE ALQREIQAAF RTDEIRRTPP TPQDEMRAGM SYFHETIWKG VPKFLRRVDT ALKNIGINER VPYNAPLIQF SSWMGGDRDG NPRVTPEVTR
301: DVCLLARMMA ANLYFSQIED LMFEMSMWRC NEELRVRAER QRCAKRDAKH YIEFWKQIPA NEPYRAILGD VRDKLYNTRE RARQLLSSGV SDVPEDAVFT
401: SVDQFLEPLE LCYRSLCDCG DRPIADGSLL DFLRQVSTFG LALVKLDIRQ ESERHSDVLD AITTHLGIGS YKEWSEDKRQ EWLLSELSGK RPLFGPDLPK
501: TEEVADVLDT FKVISELPSD SFGAYIISMA TAPSDVLAVE LLQRECGITD PLRVVPLFEK LADLESAPAA VARLFSIEWY RNRINGKQEV MIGYSDSGKD
601: AGRLSAAWQL YKTQEELVKV AKEYGVKLTM FHGRGGTVGR GGGPTHLAIL SQPPDTIHGQ LRVTVQGEVI EQSFGEEHLC FRTLQRFTAA TLEHGMHPPV
701: SPKPEWRVLM DEMAIIATEE YRSVVFKEPR FVEYFRLATP ELEYGRMNIG SRPSKRKPSG GIESLRAIPW IFAWTQTRFH LPVWLGFGGA FKRVIQKDSK
801: NLNMLKEMYN QWPFFRVTID LVEMVFAKGD PGIAALYDRL LVSEELQPFG EQLRVNYQET RRLLLQVAGH KDILEGDPYL RQRLQLRDPY ITTLNVCQAY
901: TLKQIRDPSF HVKVRPHLSK DYMESSPAAE LVKLNPKSEY APGLEDTVIL TMKGIAAGMQ NTG

Arabidopsis Description

PPC2PPC2 [Source:UniProtKB/TrEMBL;Acc:A0A178VV64]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.