Factsheet for TraesCSU01G039600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
endoplasmic reticulum 2
plasma membrane 2
vacuole 2
golgi 2
extracellular 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G234500.1	Wheat	cytosol	53.18	68.42
TraesCS3B01G004300.1	Wheat	cytosol, extracellular	84.09	59.87
Zm00001d043216_P001	Maize	cytosol	70.45	22.76
Os01t0794800-01	Rice	mitochondrion	74.09	22.12
EES01595	Sorghum	plasma membrane	71.82	21.41
Os01t0795100-00	Rice	extracellular	70.91	21.2
TraesCSU01G001100.1	Wheat	endoplasmic reticulum, extracellular	70.45	20.64
TraesCSU01G208100.1	Wheat	mitochondrion	67.27	19.76
Os01t0795000-01	Rice	extracellular, plasma membrane	65.0	19.43
GSMUA_Achr10P...	Banana	extracellular	58.64	16.1
Zm00001d043211_P001	Maize	extracellular	38.18	13.15
TraesCSU01G025500.1	Wheat	extracellular, vacuole	39.55	11.2

Protein Annotations

Gene3D:2.60.40.2310	Gene3D:3.40.50.200	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004252
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	InterPro:IPR036852
PFAM:PF00082	ScanProsite:PS00138	PANTHER:PTHR10795	PANTHER:PTHR10795:SF513	InterPro:Peptidase_S8/S53_dom	InterPro:Peptidase_S8/S53_dom_sf
InterPro:Peptidase_S8_Ser-AS	SUPFAM:SSF52743	EnsemblPlantsGene:TraesCSU01G039600	EnsemblPlants:TraesCSU01G039600.1	:	:

Description

No Description!

Coordinates

chrUn:-:32132173..32132929

Molecular Weight (calculated)

24296.3 Da

IEP (calculated)

9.017

GRAVY (calculated)

-0.086

Length

220 amino acids

Sequence
(BLAST)

001: MYSGTSMAAP HVAGIVALLK ALHQDWSPAV IKSAIITTAH VTDERDMPIL AEGVLRKMAD PFDYGGGNIN PDGAADPGLV YDIDPRDYNR FFGCTIVRRT
101: NVSCDATALP AYHLNLPSIA VPELRRPITV WRTVTNVGEA NSVYHAKVQS PAGVRIKVEP PMLVFDATNR VHSFKVKLSP MWRLQGDYTF GSITWRKDQK
201: TVRIPVAARM TIQDFYADVA

Best Arabidopsis Sequence Match ( AT4G10520.1 )
(BLAST)

001: MSKTILFLAL FLSIVLNVQI SFVVAESKVY VVYLGEKEHD NPESVTESHH QMLWSLLGSK EAVLDSIVYS YRHGFSGFAA KLTESQAQQI SELPEVVQVI
101: PNTLYEMTTT RTWDYLGVSP GNSDSLLQKA NMGYNVIVGV IDSGVWPESE MFNDKGFGPI PSRWKGGCES GELFNASIHC NRKLIGAKYF VDGLVAEFGV
201: VNRTQNPEYL SPRDFAGHGT HVASTIGGSF LPNVSYVGLG RGTARGGAPG VHIAVYKACW SGYCSGADVL KAMDEAIHDG VDILSLSLGP SVPLFPETEH
301: TSVGAFHAVA KGIPVVIAAG NAGPTAQTIS NVAPWVLTVA ATTQDRSFPT AITLGNNITI LGQAIYGGPE LGFVGLTYPE SPLSGDCEKL SANPNSTMEG
401: KVVLCFAAST PSNAAIAAVI NAGGLGLIMA KNPTHSLTPT RKFPWVSIDF ELGTDILFYI RSTRSPIVKI QASKTLFGQS VSTKVATFSS RGPNSVSPAI
501: LKPDIAAPGV NILAAISPNS SINDGGFAMM SGTSMATPVV SGVVVLLKSL HPDWSPSAIK SAIVTTAWRT DPSGEPIFAD GSSRKLADPF DYGGGLINPE
601: KAVKPGLIYD MTTDDYVMYM CSVDYSDISI SRVLGKITVC PNPKPSVLDL NLPSITIPNL RGEVTLTRTV TNVGPVNSVY KVVIDPPTGI NVAVTPAELV
701: FDYTTTKRSF TVRVSTTHKV NTGYYFGSLT WTDNMHNVAI PVSVRTQILQ RYYDEN

Arabidopsis Description

SBT3.9Subtilisin-like protease SBT3.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSB0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.