Factsheet for TraesCSU01G048500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G061500.1	Wheat	endoplasmic reticulum	94.95	94.95
TraesCSU01G209200.1	Wheat	peroxisome	61.75	91.64
TraesCS3A01G061700.1	Wheat	endoplasmic reticulum, golgi	88.74	91.58
TraesCSU01G049000.1	Wheat	peroxisome	61.94	91.4
HORVU3Hr1G011870.4	Barley	golgi	88.93	89.11
TraesCSU01G177100.1	Wheat	peroxisome	64.66	80.43
TraesCSU01G048600.1	Wheat	golgi	79.03	79.18
TraesCSU01G254000.1	Wheat	cytosol, mitochondrion, nucleus	27.38	74.21
TraesCSU01G188200.1	Wheat	cytosol	49.51	73.28
TraesCSU01G085600.1	Wheat	golgi	64.08	62.03
Zm00001d003142_P001	Maize	mitochondrion	59.81	60.63
Zm00001d003140_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, plastid	60.78	57.86
EES11071	Sorghum	extracellular, golgi, mitochondrion	61.94	57.48
Zm00001d003144_P001	Maize	endoplasmic reticulum, golgi, plastid	59.03	56.3
Os11t0465200-01	Rice	endoplasmic reticulum	54.37	54.58
Zm00001d029184_P001	Maize	endoplasmic reticulum, plastid	51.07	53.56
OQU92584	Sorghum	cytosol	53.79	52.17
TraesCSU01G110100.1	Wheat	endoplasmic reticulum	53.2	51.31
TraesCSU01G155100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	47.96	49.4
GSMUA_Achr8P32610_001	Banana	endoplasmic reticulum	39.03	43.32
GSMUA_Achr3P22060_001	Banana	endoplasmic reticulum, golgi	33.79	42.65
TraesCSU01G247100.1	Wheat	cytosol	19.81	40.64
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	28.35	40.11
GSMUA_Achr11P...	Banana	mitochondrion	38.25	38.1
TraesCSU01G141200.1	Wheat	endoplasmic reticulum	38.06	36.64
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, plastid	27.96	35.73

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF183	SUPFAM:SSF48264	TMHMM:TMhelix
EnsemblPlantsGene:TraesCSU01G048500	EnsemblPlants:TraesCSU01G048500.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrUn:-:38669418..38671469

Molecular Weight (calculated)

57972.8 Da

IEP (calculated)

8.686

GRAVY (calculated)

-0.023

Length

515 amino acids

Sequence
(BLAST)

001: MSHLLQKLLP ETLPRAWLFL FLFFLVVSVQ YWITEKFGAK RRQRLPPSPP ALPIIGHLHL IGSLPHVSLR SLARKHGPDV MLLHLGAVPN LVVSSSRAAE
101: AVLRTHDHVF ASRPHSVVSD TIMYGSADIG FAPYGEYWRQ ARKLVTTHML SVKKVRSFRG AAAEEVSMAM AKINQAAAAD AAVDMSELLH TFANDMACRI
201: VSGKFFLKDG QSKLFRELIK DTSRLLGGFN LEEYFPAVGR VGVVKKAVCA KAERVRNRWA DLLEKVIDDR VSKRNSTSDH KDDDFVDIML SVQHEYDLTR
301: EHMKALLTDV FFGAIDTSAN ALEFTLAELM RKPHLMVKLQ DEVRGIVPQG QEIISETDMN NMTYLRAVIK ESLRLHPLAP LLAPHLAMAD CIIDGYIVPA
401: GTRVVINAWA IGRDPSSWEY AEEFIPERFT DEGSSMHVNF KGNDFQFLPF GAGRRMCPGM NLGIANVELM LANLVCHFDW QLPLGVERKD IDMTEVFGLT
501: VRRKEKLLFI PKSRM

Best Arabidopsis Sequence Match ( AT2G30770.1 )
(BLAST)

001: MEMILSISLC LTTLITLLLL RRFLKRTATK VNLPPSPWRL PVIGNLHQLS LHPHRSLRSL SLRYGPLMLL HFGRVPILVV SSGEAAQEVL KTHDHKFANR
101: PRSKAVHGLM NGGRDVVFAP YGEYWRQMKS VCILNLLTNK MVESFEKVRE DEVNAMIEKL EKASSSSSSE NLSELFITLP SDVTSRVALG RKHSEDETAR
201: DLKKRVRQIM ELLGEFPIGE YVPILAWIDG IRGFNNKIKE VSRGFSDLMD KVVQEHLEAS NDKADFVDIL LSIEKDKNSG FQVQRNDIKF MILDMFIGGT
301: STTSTLLEWT MTELIRSPKS MKKLQDEIRS TIRPHGSYIK EKEVENMKYL KAVIKEVLRL HPSLPMILPR LLSEDVKVKG YNIAAGTEVI INAWAIQRDT
401: AIWGPDAEEF KPERHLDSGL DYHGKNLNYI PFGSGRRICP GINLALGLAE VTVANLVGRF DWRVEAGPNG DQPDLTEAIG IDVCRKFPLI AFPSSVV

Arabidopsis Description

CYP71A13Indoleacetaldoxime dehydratase [Source:UniProtKB/Swiss-Prot;Acc:O49342]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.