Factsheet for TraesCSU01G137800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G616200.1	Wheat	nucleus	91.85	51.97
TraesCS2D01G566400.1	Wheat	nucleus	86.33	48.85
HORVU2Hr1G127770.1	Barley	nucleus	79.62	46.96
HORVU2Hr1G127700.1	Barley	nucleus	79.62	46.96
KRG97025	Soybean	nucleus	26.14	38.38
VIT_05s0049g01800.t01	Wine grape	nucleus	49.88	37.14
PGSC0003DMT400051920	Potato	nucleus	44.6	36.54
CDX92067	Canola	nucleus	40.77	36.02
AT3G04380.1	Thale cress	nucleus	41.25	34.96
EES13161	Sorghum	nucleus	59.23	31.35
GSMUA_Achr1P20340_001	Banana	nucleus	53.0	31.13
CDY49341	Canola	nucleus	40.53	30.34
KRH34133	Soybean	nucleus	49.16	29.88
Zm00001d002938_P001	Maize	nucleus	49.88	29.25
KRH68776	Soybean	nucleus	46.52	28.66
KRG92731	Soybean	nucleus	48.2	28.19
Bra036004.1-P	Field mustard	nucleus	39.57	26.4
CDY14903	Canola	nucleus	39.57	25.78
PGSC0003DMT400044180	Potato	nucleus	46.28	25.03
VIT_07s0005g04190.t01	Wine grape	mitochondrion, nucleus	50.6	24.88
KRG95723	Soybean	nucleus	42.45	24.45
Solyc09g090630.1.1	Tomato	nucleus	46.28	24.31
Solyc09g072890.1.1	Tomato	nucleus	47.96	24.24
CDX94744	Canola	nucleus	38.85	23.65
KRH32246	Soybean	nucleus	46.28	23.51
AT5G43990.9	Thale cress	nucleus	41.49	23.38
KRH19618	Soybean	nucleus	46.04	23.36
Solyc06g083760.2.1	Tomato	nucleus	48.2	23.34
CDY22319	Canola	nucleus	39.09	23.12
Bra001104.1-P	Field mustard	nucleus	40.77	22.49
AT1G04050.1	Thale cress	nucleus	39.57	22.48
Bra033710.1-P	Field mustard	nucleus	38.61	21.47
CDX96935	Canola	nucleus	39.33	20.92
CDY42922	Canola	plasma membrane, vacuole	40.53	20.41
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	40.05	17.73
CDX92068	Canola	mitochondrion	0.0	0.0
CDY42923	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0018024
GO:GO:0019538	GO:GO:0034968	InterPro:IPR001214	InterPro:IPR007728	PFAM:PF00856	PFAM:PF05033
PFscan:PS50280	PFscan:PS50867	PANTHER:PTHR22884	PANTHER:PTHR22884:SF460	InterPro:Pre-SET_dom	InterPro:SET_dom
SMART:SM00317	SMART:SM00468	SUPFAM:SSF82199	EnsemblPlantsGene:TraesCSU01G137800	EnsemblPlants:TraesCSU01G137800.1	:

Description

No Description!

Coordinates

chrUn:+:124963750..124965374

Molecular Weight (calculated)

46029.2 Da

IEP (calculated)

7.822

GRAVY (calculated)

-0.252

Length

417 amino acids

Sequence
(BLAST)

001: MPDLEAVYKM VEDKYHCSDK LLPPDFSIPG LMAEICQSVV QLGTQHTVEH ITQSRTVGNG STSKCVEGGS ASSTTAPQPH SALSRTTHDV HDISKGQENV
101: KIPIANESGR GKCPPSFSYV PGNEVFQNGI VNISLAQIGA EDCCADCFGD CLSAPVPCAC ARVTGGEYAY TPGGLVKPDF IDKCVSMNRV PEAHHKVFCK
201: TCPLERSRDK ASPEPCRGHL VRKFIKECWS KCRCSTRCGN RVVQRGIRFN LEVFSTGNGR GWGLRTQNAL PKGAFVCEYA GEILTCAEVQ ERAVENMKNA
301: RYTHAVVLDA GWSSGGSLKD EEALCLDGTF YGNVGRFINH RCRDSNLAMV PVQVETPDRH YYHVAFFTSR KVEALEELTW VCMYVCMHSL FLLIVLSNEA
401: KHKHCLLVRP RKVCTRL

Best Arabidopsis Sequence Match ( AT3G04380.1 )
(BLAST)

001: MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGNRGKNLKV
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK

Arabidopsis Description

SUVR4Histone-lysine N-methyltransferase SUVR4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W595]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.