Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G235000.1 | Wheat | cytosol | 99.28 | 99.28 |
| TraesCSU01G148100.1 | Wheat | cytosol | 97.12 | 97.12 |
| TraesCSU01G074400.1 | Wheat | cytosol | 94.24 | 94.24 |
| TraesCS5A01G267800.1 | Wheat | cytosol | 91.37 | 92.03 |
| TraesCSU01G148300.1 | Wheat | cytosol | 88.49 | 89.13 |
| TraesCSU01G240800.1 | Wheat | cytosol | 87.77 | 88.41 |
| TraesCS5B01G267600.1 | Wheat | cytosol | 84.89 | 88.06 |
| TraesCSU01G074500.1 | Wheat | cytosol | 59.71 | 85.57 |
| HORVU3Hr1G030970.1 | Barley | cytosol | 82.73 | 83.33 |
| TraesCSU01G148000.1 | Wheat | cytosol | 79.86 | 80.43 |
| TraesCSU01G074600.1 | Wheat | cytosol | 79.86 | 80.43 |
| TraesCSU01G231300.1 | Wheat | cytosol | 79.86 | 80.43 |
| HORVU5Hr1G073650.1 | Barley | cytosol | 76.26 | 76.81 |
| HORVU5Hr1G073690.1 | Barley | cytosol | 75.54 | 76.09 |
| HORVU5Hr1G073700.1 | Barley | cytosol, mitochondrion, nucleus | 80.58 | 70.0 |
| HORVU5Hr1G073640.1 | Barley | cytosol, mitochondrion, nucleus | 80.58 | 68.71 |
| TraesCSU01G148200.1 | Wheat | cytosol | 92.09 | 63.68 |
| Os11t0594800-01 | Rice | cytosol | 62.59 | 61.27 |
| Os11t0594700-00 | Rice | nucleus | 60.43 | 59.15 |
| HORVU5Hr1G073710.1 | Barley | mitochondrion | 81.3 | 56.78 |
| GSMUA_Achr9P04160_001 | Banana | cytosol | 54.68 | 53.15 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.17 | 52.63 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.45 | 51.75 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.45 | 51.75 |
| TraesCSU01G243200.1 | Wheat | cytosol | 46.76 | 43.33 |
| TraesCSU01G231600.1 | Wheat | cytosol | 37.41 | 41.27 |
| Os11t0595000-00 | Rice | nucleus | 55.4 | 38.31 |
| TraesCSU01G068000.1 | Wheat | cytosol | 40.29 | 33.33 |
Protein Annotations
| EnsemblPlants:TraesCSU01G148400.1 | EnsemblPlantsGene:TraesCSU01G148400 | Gene3D:2.30.240.10 | InterPro:At5g01610-like | InterPro:DUF538 | InterPro:IPR036758 |
| PANTHER:PTHR31676 | PANTHER:PTHR31676:SF26 | PFAM:PF04398 | SEG:seg | SUPFAM:SSF141562 | MapMan:35.2 |
Description
No Description!
Coordinates
chrUn:+:171301328..171301747
Molecular Weight (calculated)
15548.6 Da
IEP (calculated)
5.057
GRAVY (calculated)
-0.432
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQLVESHR AGAEVHKGND ICKKKTIELL EELDLPKGLF PMDDIEEVGH NCESGFVWML QKKKNKHMFN KLNQTVSYDT EVTAFVEKGK MKKVTGVKVE
101: DLYSLVEVYV DESSADKVTI KTDTGLSETH DAPVFAVGE
101: DLYSLVEVYV DESSADKVTI KTDTGLSETH DAPVFAVGE
001: MGLVTEEVRA KAEMYTGDEI CREKTKCFLK EISMPNGLLP LKDIEEVGYD RESGVVWLKQ KKSITHKFTE IDKLVSYGTE VTAIVETGKI KKLTGVKAKE
101: LLIWVTINEI YTEEPPTKIT FKTPTTLSRT FPVTAFIVPE EPAKEEPAKE EPAKEKSSEA TEAKEAVAIK EAVAVKEAA
101: LLIWVTINEI YTEEPPTKIT FKTPTTLSRT FPVTAFIVPE EPAKEEPAKE EPAKEKSSEA TEAKEAVAIK EAVAVKEAA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPZ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.