Factsheet for VIT_00s0309g00020.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0013g00310.t01	Wine grape	nucleus	39.72	62.34
TraesCS3A01G520700.1	Wheat	nucleus	21.79	54.86
VIT_16s0013g00650.t01	Wine grape	nucleus	44.0	54.81
KRH77297	Soybean	nucleus	63.03	42.28
KRH28192	Soybean	nucleus	62.62	41.05
VIT_14s0068g01090.t01	Wine grape	nucleus	28.69	39.62
TraesCS3B01G590300.1	Wheat	nucleus	34.21	39.49
VIT_01s0150g00070.t01	Wine grape	nucleus	26.34	39.22
KRH77260	Soybean	nucleus	25.79	38.4
KRH28232	Soybean	nucleus	25.24	37.42
Os04t0544100-01	Rice	nucleus	39.03	33.65
VIT_13s0047g00120.t01	Wine grape	nucleus	32.41	32.82
EES05802	Sorghum	nucleus	33.38	30.75
EES12588	Sorghum	nucleus	37.24	30.3
VIT_08s0040g00360.t01	Wine grape	nucleus	29.52	29.04
TraesCS2B01G409600.1	Wheat	nucleus	38.34	28.9
VIT_05s0049g02220.t01	Wine grape	nucleus	26.62	28.72
TraesCS2D01G389100.1	Wheat	nucleus	37.93	28.65
VIT_08s0056g01660.t01	Wine grape	nucleus	12.41	28.21
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	38.07	27.38
VIT_05s0049g01800.t01	Wine grape	nucleus	14.62	18.93
VIT_07s0005g04190.t01	Wine grape	mitochondrion, nucleus	16.97	14.5
VIT_04s0023g00980.t01	Wine grape	nucleus	20.0	9.56

Protein Annotations

KEGG:00310+2.1.1.43	EntrezGene:100242100	wikigene:100242100	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10
EMBL:AM458802	ProteinID:CAN76871	ProteinID:CAN76871.1	ProteinID:CCB53247	ProteinID:CCB53247.1	UniProt:F6HJQ3
EMBL:FN595791	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant
InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987
EntrezGene:LOC100242100	wikigene:LOC100242100	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280
PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF458
InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466
SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI0002109328
ArrayExpress:VIT_00s0309g00020	EnsemblPlantsGene:VIT_00s0309g00020	EnsemblPlants:VIT_00s0309g00020.t01	RefSeq:XP_003635220	RefSeq:XP_003635220.1	SEG:seg

Description

No Description!

Coordinates

chrUn:+:22578033..22580216

Molecular Weight (calculated)

80917.1 Da

IEP (calculated)

7.802

GRAVY (calculated)

-0.602

Length

725 amino acids

Sequence
(BLAST)

001: MEFEVKREQS IGSPRENNLP RPDQKSQIVE KANEVLEGKV GKEIVIYSKD ENSKRKVTSL SGRVNKVPAG DELSQERVTV LCLMAAQNCP WRRQGKGGLK
101: LDSGMSGRKG KKDGLAGLEK SKSIVRAKTD RAEKSGGKSI KRKSSPTRKA ENLGMGQLVV KDEEDSIEHY EEQGDFHVGQ RLLDFNVSLP PFGPSSSSGK
201: VEACDSIVTR NKVRETLRLF QAIFRKLLQE EEAKTKQGGN PVRRVDYLAS RILKDKGKHV NTGKQIIGPV PGVEVGDEFQ YRVELGIIGL HRPTQGGIDY
301: RKHDGKILAT SIVASGGYAD DLDNSDVLIY SGQGGNLIGG DKQPEDQKLE RGNLALKNSI DAKNLVRVIR GFKETKAPEY MDSRAKVVTT YIYDGLYLVE
401: KYWQEIGPHG KLVFKFQLNR IPGQPELAWK EVKNSKKFKV REGLCVDDIS MGKEPIPIFA VNTIDDEKPP PFTYITSMIY PDWCHRLPPN GCDCSNGCSD
501: SEKCSCAVKN GGEIPYNYNG AIVEAKPLVY ECSPSCKCSR SCHNRVSQHG IKFQLEIFKT VSRGWGVRSL TSIPSGSFIC EYIGELLEDK EAEQRTGNDE
601: YLFDIGHNYN EILWDGISTL MPDAQLSSCE VVEDAGFTID AAQYGNVGRF INHSCSPNLY AQNVLYDHDN KRIPHIMLFA AENIPPLQEL TYHYNYTIDQ
701: VRDSNGNIKK KSCYCGSDEC TGRMY

Best Arabidopsis Sequence Match ( AT2G35160.5 )
(BLAST)

001: MGRRKSKRFK VAAESEFSPD FGSITRQLRS RRMQKEFTVE TYETRNVSDV CVLSSQADVE LIPGEIVAER DSFKSVDCND MSVGLTEGAE SLGVNMQEPM
101: KDRNMPENTS EQNMVEVHPP SISLPEEDMM GSVCRKSITG TKELHGRTIS VGRDLSPNMG SKFSKNGKTA KRSISVEEEN LVLEKSDSGD HLGPSPEVLE
201: LEKSEVWIIT DKGVVMPSPV KPSEKRNGDY GEGSMRKNSE RVALDKKRLA SKFRLSNGGL PSCSSSGDSA RYKVKETMRL FHETCKKIMQ EEEARPRKRD
301: GGNFKVVCEA SKILKSKGKN LYSGTQIIGT VPGVEVGDEF QYRMELNLLG IHRPSQSGID YMKDDGGELV ATSIVSSGGY NDVLDNSDVL IYTGQGGNVG
401: KKKNNEPPKD QQLVTGNLAL KNSINKKNPV RVIRGIKNTT LQSSVVAKNY VYDGLYLVEE YWEETGSHGK LVFKFKLRRI PGQPELPWKE VAKSKKSEFR
501: DGLCNVDITE GKETLPICAV NNLDDEKPPP FIYTAKMIYP DWCRPIPPKS CGCTNGCSKS KNCACIVKNG GKIPYYDGAI VEIKPLVYEC GPHCKCPPSC
601: NMRVSQHGIK IKLEIFKTES RGWGVRSLES IPIGSFICEY AGELLEDKQA ESLTGKDEYL FDLGDEDDPF TINAAQKGNI GRFINHSCSP NLYAQDVLYD
701: HEEIRIPHIM FFALDNIPPL QELSYDYNYK IDQVYDSNGN IKKKFCYCGS AECSGRLY

Arabidopsis Description

SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.