Factsheet for VIT_00s0532g00070.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s2659g00010.t01	Wine grape	plastid	53.71	61.15
VIT_00s2745g00010.t01	Wine grape	extracellular, plasma membrane	54.6	53.49
VIT_03s0017g01550.t01	Wine grape	cytosol, plasma membrane, plastid	57.27	40.04
VIT_10s0092g00650.t01	Wine grape	plasma membrane	64.69	35.1
VIT_02s0087g01020.t01	Wine grape	plasma membrane	64.39	32.88
VIT_00s0366g00020.t01	Wine grape	plasma membrane	62.91	31.74
VIT_00s0437g00070.t01	Wine grape	plasma membrane	56.08	31.61
VIT_00s0262g00010.t01	Wine grape	plasma membrane	61.72	31.47
VIT_00s0409g00060.t01	Wine grape	plasma membrane	57.86	31.0
VIT_00s0429g00010.t01	Wine grape	plasma membrane	59.94	30.61
VIT_00s0748g00020.t01	Wine grape	plasma membrane	54.01	30.38
VIT_00s0262g00080.t01	Wine grape	plasma membrane	59.35	30.26
VIT_00s0409g00010.t01	Wine grape	mitochondrion, plasma membrane	62.02	29.52
VIT_00s0398g00060.t01	Wine grape	plasma membrane	58.46	28.55
VIT_10s0071g01200.t01	Wine grape	plasma membrane	61.13	24.49
VIT_00s0262g00120.t01	Wine grape	plasma membrane	60.24	21.12

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100852482	wikigene:100852482	MapMan:18.4.1.24.1	Gene3D:3.30.200.20	ProteinID:CBI33228
ProteinID:CBI33228.3	UniProt:D7TRV2	EMBL:FN596044	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100852482	wikigene:LOC100852482	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27002	PANTHER:PTHR27002:SF181	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001BE3E05	ArrayExpress:VIT_00s0532g00070	EnsemblPlantsGene:VIT_00s0532g00070	EnsemblPlants:VIT_00s0532g00070.t01	RefSeq:XP_003635399
RefSeq:XP_003635399.1	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:31446304..31448049

Molecular Weight (calculated)

38105.4 Da

IEP (calculated)

6.181

GRAVY (calculated)

-0.282

Length

337 amino acids

Sequence
(BLAST)

001: MSIESLLFDL NTIKAATDDF ADSNKLGEGG FGPVYKGKLR DGQEIAVKRL SRTSGQGVEE FKNEIILVAK LQHRNLVRLL GCCFEGQERL LVYEFVLNTS
101: LDKFLFDPTR RAQLDWDTRY KIISGVARGI LYLHEDSRLR VIHRDIKASN VLLDNKMNPK ISDFGVARMF DVDQTRANTN RIVGTYGYMS PEYAMQGQFS
201: VKSDVFSFGV LLLEIVRGQK NSSFYLTDSS HDLLSYAWKL WTENRPLELV DSALGNMFPS NEVLKCIHIG LLCVQEDAAD RPTMSSVAFM LNSYSSTLDH
301: PAPPPLVGEN RSKELHWSAT RSQYSVNELD ASEIEPR

Best Arabidopsis Sequence Match ( AT4G05200.1 )
(BLAST)

001: MSSCFKSSVS LFSVFLFMIL KTVTSDPTYL YHICPNTTTY SRNSSYLTNL RTVLSSLSSP NAAYASLFDN AAAGEENDSN RVYGVFLCRG DVSAEICRDC
101: VAFAANETLQ RCPREKVAVI WYDECMVRYS NQSIVGQMRI RPGVFLTNKQ NITENQVSRF NESLPALLID VAVKAALSSR KFATEKANFT VFQTIYSLVQ
201: CTPDLTNQDC ESCLRQVINY LPRCCDRSVG GRVIAPSCSF RYELYPFYNE TIAAAPMAPP PSSTVTAPPL NIPSEKGKGK NLTVIVTAIA VPVSVCVLLL
301: GAMCWLLARR RNNKLSAETE DLDEDGITST ETLQFQFSAI EAATNKFSES NKLGHGGFGE VYKGQLITGE TVAIKRLSQG STQGAEEFKN EVDVVAKLQH
401: RNLAKLLGYC LDGEEKILVY EFVPNKSLDY FLFDNEKRRV LDWQRRYKII EGIARGILYL HRDSRLTIIH RDLKASNILL DADMHPKISD FGMARIFGVD
501: QTQANTKRIV GTYGYMSPEY AIHGKYSVKS DVYSFGVLVL ELITGKKNSS FYEEDGLGDL VTYVWKLWVE NSPLELVDEA MRGNFQTNEV IRCIHIALLC
601: VQEDSSERPS MDDILVMMNS FTVTLPIPKR SGFLLRTMKD SRDPRSGGSA SDHSATSKSL PLSVDDSSIT IVYPR

Arabidopsis Description

CRK25cysteine-rich RLK (RECEPTOR-like protein kinase) 25 [Source:TAIR;Acc:AT4G05200]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.