Factsheet for VIT_00s0790g00020.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 8
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0705g00010.t01	Wine grape	cytosol	62.39	95.89
VIT_07s0129g00710.t01	Wine grape	endoplasmic reticulum	77.36	86.45
VIT_07s0129g00760.t01	Wine grape	endoplasmic reticulum, golgi	77.54	86.31
VIT_07s0129g00800.t01	Wine grape	endoplasmic reticulum	77.54	86.31
VIT_07s0129g00770.t01	Wine grape	cytosol	30.66	75.77
VIT_07s0129g00730.t01	Wine grape	endoplasmic reticulum	63.1	70.94
VIT_07s0129g00820.t01	Wine grape	endoplasmic reticulum	61.85	69.68
VIT_07s0129g00830.t01	Wine grape	cytosol	28.52	67.8
VIT_07s0129g00810.t01	Wine grape	cytosol	42.6	67.13
VIT_14s0030g01940.t01	Wine grape	endoplasmic reticulum	57.93	65.26
VIT_07s0129g00850.t01	Wine grape	endoplasmic reticulum	48.66	64.54
VIT_07s0129g00700.t01	Wine grape	cytosol	25.13	60.26
Solyc02g092860.2.1	Tomato	endoplasmic reticulum, golgi	53.48	60.0
PGSC0003DMT400068626	Potato	mitochondrion	19.61	59.78
PGSC0003DMT400064225	Potato	cytosol, mitochondrion	42.07	59.45
VIT_18s0001g09500.t01	Wine grape	endoplasmic reticulum	48.13	54.22
Solyc02g064850.1.1	Tomato	extracellular, plasma membrane	47.24	53.97
VIT_18s0001g09510.t01	Wine grape	endoplasmic reticulum	47.95	53.91
VIT_07s0129g00750.t01	Wine grape	cytosol	24.78	52.65
VIT_09s0002g06450.t01	Wine grape	endoplasmic reticulum	46.88	51.87
VIT_09s0002g06440.t01	Wine grape	endoplasmic reticulum	46.88	51.77
VIT_18s0001g09520.t01	Wine grape	golgi	47.77	51.15
VIT_09s0002g06470.t01	Wine grape	endoplasmic reticulum	43.67	47.85
VIT_18s0001g09650.t01	Wine grape	endoplasmic reticulum	43.14	47.73
VIT_18s0001g09660.t01	Wine grape	cytosol	52.94	47.6
VIT_09s0002g06480.t01	Wine grape	endoplasmic reticulum	39.93	47.56
Zm00001d020105_P001	Maize	cytosol	6.95	46.43
VIT_07s0129g00860.t01	Wine grape	endoplasmic reticulum	68.09	36.55
Os02t0504000-01	Rice	endoplasmic reticulum, plasma membrane	11.23	34.05

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100853341	wikigene:100853341	MapMan:50.1.13	ProteinID:CCB45344	ProteinID:CCB45344.1
ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:F6GZF8
EMBL:FN595057	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009605
GO:GO:0009607	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016705
GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0042343	GO:GO:0044550	GO:GO:0046872
GO:GO:0055114	GO:GO:0098542	InterPro:IPR036396	EntrezGene:LOC100853341	wikigene:LOC100853341	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF318	SUPFAM:SSF48264
TMHMM:TMhelix	UniParc:UPI0002108C91	ArrayExpress:VIT_00s0790g00020	EnsemblPlantsGene:VIT_00s0790g00020	EnsemblPlants:VIT_00s0790g00020.t01	RefSeq:XP_003635481
RefSeq:XP_003635481.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:35411707..35413967

Molecular Weight (calculated)

63406.2 Da

IEP (calculated)

7.835

GRAVY (calculated)

-0.107

Length

561 amino acids

Sequence
(BLAST)

001: MEVSSLHSSL SLLFVFLLLV IGILFPRRRY GNLPPSPPAV PILGHLHLLK QPVHRSLQRL SLEYGPIFSL RFGSQLVVIV SSPSAVEECF TKNDVVLANR
101: PRLASGKYLG FNYTSVVSAS YGEHWRNLRR LCAQEIFSSN RLNMFLGIRR DEVKLLLLRL ARDSREGFAK VELRPMLTEL TFNIITRMVA GKRYYGEGVE
201: FEEAKRFREI ISEAFKLSEA SSNPTDFLPI LRWIGFGDHE KKLKKTMRET EVILQGLIDE HRGGNDRGSV DNNSMIDHLL SLQTTEPEYY TDDIIKGLVL
301: ILILAGTDTS AATMEWAMTL LLNHPDVLKK AKAELDIHVG KDRLIEESDL PELRYLQRII SETLRLFPVA PLLVPHMSSD DCQIGGFDIP GGTFLLINAW
401: AIHRDPQVWE DPTSFIPERF QNGERENYKL LPFGIGRRAC PGAGLAHRVV GLALGSLIQC YDWKRISKTT IDTTEGKGLT MPKLEPLEAM CKACEIIKTG
501: SLELENNIYS LGTAPYGEHW RNLRRISTLE VFSSNRLNMF LGNPRDKINH LLIACLGTPI E

Best Arabidopsis Sequence Match ( AT5G36220.1 )
(BLAST)

001: MEETNIRVVL YSIFSLIFLI ISFKFLKPKK QNLPPSPPGW LPIIGHLRLL KPPIHRTLRS FSETLDHNDG GGVMSLRLGS RLVYVVSSHK VAAEECFGKN
101: DVVLANRPQV IIGKHVGYNN TNMIAAPYGD HWRNLRRLCT IEIFSTHRLN CFLYVRTDEV RRLISRLSRL AGTKKTVVEL KPMLMDLTFN NIMRMMTGKR
201: YYGEETTDEE EAKRVRKLVA DVGANTSSGN AVDYVPILRL FSSYENRVKK LGEETDKFLQ GLIDDKRGQQ ETGTTMIDHL LVLQKSDIEY YTDQIIKGII
301: LIMVIAGTNT SAVTLEWALS NLLNHPDVIS KARDEIDNRV GLDRLIEEAD LSELPYLKNI VLETLRLHPA TPLLVPHMAS EDCKIGSYDM PRGTTLLVNA
401: WAIHRDPNTW DDPDSFKPER FEKEEEAQKL LAFGLGRRAC PGSGLAQRIV GLALGSLIQC FEWERVGNVE VDMKEGVGNT VPKAIPLKAI CKARPFLHKI
501: IS

Arabidopsis Description

CYP81D1Cytochrome P450 81D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG65]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.