Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- plasma membrane 6
- extracellular 6
- endoplasmic reticulum 5
- golgi 5
- vacuole 6
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P26830_001 | Banana | plastid | 32.51 | 59.85 |
| KRH57376 | Soybean | plasma membrane | 44.03 | 59.78 |
| KRH04104 | Soybean | extracellular, plasma membrane | 40.33 | 55.06 |
| PGSC0003DMT400093516 | Potato | plastid | 45.27 | 48.03 |
| CDY12951 | Canola | extracellular | 50.62 | 44.57 |
| Solyc08g078890.1.1 | Tomato | extracellular, golgi, plasma membrane | 53.09 | 44.18 |
| VIT_03s0017g02260.t01 | Wine grape | extracellular | 35.39 | 44.1 |
| CDY70376 | Canola | extracellular | 50.21 | 42.66 |
| Bra027040.1-P | Field mustard | extracellular | 52.26 | 41.5 |
| AT1G62500.1 | Thale cress | extracellular | 50.62 | 41.41 |
| VIT_11s0016g05840.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 42.8 | 39.1 |
| VIT_03s0017g02200.t01 | Wine grape | extracellular | 32.1 | 37.32 |
| GSMUA_Achr4P29020_001 | Banana | plastid | 31.69 | 36.84 |
Protein Annotations
| Gene3D:1.10.110.10 | EntrezGene:100262648 | wikigene:100262648 | MapMan:35.1 | EMBL:AM444283 | InterPro:Bifun_inhib/LTP/seed_sf |
| ProteinID:CAN80711 | ProteinID:CAN80711.1 | ProteinID:CCB56509 | ProteinID:CCB56509.1 | UniProt:F6HPA3 | EMBL:FN596001 |
| InterPro:Hydrophob_seed | EntrezGene:LOC100262648 | wikigene:LOC100262648 | PFAM:PF14547 | PANTHER:PTHR31731 | PANTHER:PTHR31731:SF25 |
| SUPFAM:SSF47699 | SignalP:SignalP-noTM | TIGR:TC62192 | UniParc:UPI0002108555 | ArrayExpress:VIT_02s0154g00310 | EnsemblPlantsGene:VIT_02s0154g00310 |
| EnsemblPlants:VIT_02s0154g00310.t01 | unigene:Vvi.25826 | RefSeq:XP_002271658 | RefSeq:XP_002271658.2 | SEG:seg | : |
Description
No Description!
Coordinates
chr2:-:5134356..5135385
Molecular Weight (calculated)
24491.3 Da
IEP (calculated)
8.560
GRAVY (calculated)
0.066
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSKGTAMFF IFMIFMLMAL PPMQACGYCS QPQPPYRYPS PPYRRPNTPT IPHPHPHPPS KKHPPGHHKE RPIVSPPSNN PPGITPPVVN PPVTIPPPSS
101: TYPPYTGNPP SGGGGGGGGG GGGGGGGGGG GGGGGGGGLP GLNPPPSTSP TCPVNAIKLG ACVDVLGGLV HIGLGNPVEN VCCPVLGGLL ELEAAVCLCT
201: AIRLKLLNLN IFIPIALEAL ITCGKTPPPG FVCPPLYMIP LVL
101: TYPPYTGNPP SGGGGGGGGG GGGGGGGGGG GGGGGGGGLP GLNPPPSTSP TCPVNAIKLG ACVDVLGGLV HIGLGNPVEN VCCPVLGGLL ELEAAVCLCT
201: AIRLKLLNLN IFIPIALEAL ITCGKTPPPG FVCPPLYMIP LVL
001: MGSRVLASFF VFLIFTVITL PPTIQACTPC TRPHPPVPKP PQHGGGGGGG SKPPPHHGGK GGGKPPPHGG KGGGPPHHGG GGGGGGKSPP VVRPPPVVVR
101: PPPIIRPPPV VYPPPIVRPP PITRPPIIIP PIQPPPVTTP PGLLPPITTP PGLLPPVTTP PGLLPPVTTP PGLLPPIINP PPVTVPPPSS GYPPYGPPSG
201: GGGGGGGKQP TCPINALKLG ACVDVLGGLI HIGLGNPVEN VCCPVLQGLL ELEAAVCLCT TIRLKLLNLN IFIPLALQAL ITCGINPPSG FVCPPLT
101: PPPIIRPPPV VYPPPIVRPP PITRPPIIIP PIQPPPVTTP PGLLPPITTP PGLLPPVTTP PGLLPPVTTP PGLLPPIINP PPVTVPPPSS GYPPYGPPSG
201: GGGGGGGKQP TCPINALKLG ACVDVLGGLI HIGLGNPVEN VCCPVLQGLL ELEAAVCLCT TIRLKLLNLN IFIPLALQAL ITCGINPPSG FVCPPLT
Arabidopsis Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SXE7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.