Factsheet for VIT_03s0017g02260.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plasma membrane 6
extracellular 8
endoplasmic reticulum 5
golgi 5
vacuole 6
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, nucleus, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0017g02200.t01	Wine grape	extracellular	69.74	65.07
GSMUA_Achr2P01500_001	Banana	endoplasmic reticulum, extracellular	45.13	56.77
TraesCS7D01G020100.1	Wheat	cytosol, plastid	32.31	56.76
TraesCS2B01G444500.1	Wheat	extracellular	43.59	51.83
TraesCS2D01G422700.1	Wheat	extracellular	43.08	51.22
OQU82307	Sorghum	extracellular, plasma membrane	38.46	50.68
TraesCS2A01G424800.1	Wheat	extracellular	42.56	50.61
Zm00001d026282_P001	Maize	extracellular	41.54	50.31
TraesCS7D01G020000.1	Wheat	plastid	35.9	49.3
CDY06505	Canola	extracellular	52.31	49.04
TraesCS7A01G024100.1	Wheat	plastid	36.92	48.32
Zm00001d002347_P001	Maize	extracellular	35.9	48.28
CDY59805	Canola	extracellular	56.92	47.03
CDY22735	Canola	extracellular	55.9	46.19
Os04t0612500-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	21.03	46.07
TraesCS2D01G422800.1	Wheat	extracellular, plastid	45.13	45.13
Bra038089.1-P	Field mustard	extracellular	56.92	43.36
CDY09061	Canola	extracellular	56.41	42.97
Bra001852.1-P	Field mustard	extracellular	56.92	42.53
Bra037084.1-P	Field mustard	extracellular	56.92	42.53
CDY47794	Canola	extracellular	48.21	42.34
AT4G15160.1	Thale cress	extracellular	57.95	41.09
KRG90032	Soybean	extracellular	66.67	39.63
HORVU2Hr1G099450.1	Barley	endoplasmic reticulum	38.46	39.06
CDY22936	Canola	plasma membrane	57.95	38.83
Bra023850.1-P	Field mustard	extracellular	45.64	38.7
VIT_11s0016g05840.t01	Wine grape	endoplasmic reticulum, plasma membrane	52.31	38.35
Bra039563.1-P	Field mustard	plasma membrane	56.92	38.14
Os06t0168700-01	Rice	plastid	45.13	35.77
CDY39502	Canola	extracellular	49.23	35.56
VIT_02s0154g00310.t01	Wine grape	extracellular, plasma membrane	44.1	35.39
TraesCS7A01G024200.1	Wheat	plastid	40.0	35.14
CDY19310	Canola	extracellular	47.69	34.44
KRH17654	Soybean	extracellular	67.18	34.11
Bra031329.1-P	Field mustard	extracellular	58.46	33.53
HORVU7Hr1G027440.2	Barley	extracellular	45.64	31.45
EER89284	Sorghum	endoplasmic reticulum, vacuole	50.77	30.56
PGSC0003DMT400035207	Potato	extracellular	59.49	29.74
AT3G22120.2	Thale cress	plastid	52.82	29.34
HORVU2Hr1G099370.2	Barley	mitochondrion	39.49	28.52
TraesCS7B01G031800.1	Wheat	extracellular	44.62	27.1
HORVU2Hr1G099470.5	Barley	extracellular	40.51	16.67
AT3G22142.1	Thale cress	extracellular, plasma membrane, vacuole	48.72	6.42

Protein Annotations

Gene3D:1.10.110.10	MapMan:35.1	ProteinID:AAD53123	ProteinID:AAD53123.1	ProteinID:AAD53124	ProteinID:AAD53124.1
EMBL:AF176653	EMBL:AF176654	InterPro:Bifun_inhib/LTP/seed_sf	InterPro:Bifunc_inhib/LTP/seed_store	ProteinID:CCB58060	ProteinID:CCB58060.1
UniProt:F6HTP9	EMBL:FN596248	InterPro:Hydrophob_seed	PFAM:PF14547	PRINTS:PR01217	PFscan:PS51257
PANTHER:PTHR31731	PANTHER:PTHR31731:SF16	SMART:SM00499	SUPFAM:SSF47699	SignalP:SignalP-noTM	UniParc:UPI00021093C8
ArrayExpress:VIT_03s0017g02260	EnsemblPlantsGene:VIT_03s0017g02260	EnsemblPlants:VIT_03s0017g02260.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr3:+:19020405..19021602

Molecular Weight (calculated)

20322.7 Da

IEP (calculated)

9.289

GRAVY (calculated)

0.113

Length

195 amino acids

Sequence
(BLAST)

001: MGKHGLATWL VILLNFATLL TSLACSYCPS PTPPKPPKVK HPLPPLPPKH PPHVKPPHTP MPPKPPVVKP PYVPKPPVVQ PPPPPVVHPP PPPTPCPPPP
101: PPKGRPPPQQ TCPIDTLKLG ACVDLLGGLV HIGIGSSAKD TCCPVLQGLV DLDAAVCLCT AIKVKLLNVN IIIPIALQVL VGCGKTPPSG FQCPA

Best Arabidopsis Sequence Match ( AT3G22142.1 )
(BLAST)

0001: MGFRTRNLSF LILLLLNFFA ATYARECSPP KPSPKPHKPP KHSVVPPKPP AVKPHPHPKP PTIKPPPPKR HPHPKPPTVK PHPHPKPPTK PHPHPKPPTK
0101: PHPHPKPPTI KPPPHPKPRP HPKPPNVKPH PHPKPPTKPH PHPKPPTKHH PHPKPPTIKP PPKPPSVKPP PSTPKPPTTN PPPSTPQPPT HKPPPCTPTP
0201: PVASPPMATP PTQMPPIATP PIAKSPVATP PIATPPTATP PITIPPVATP PITTPPIANP PIIMPPIATP PVAAPPITNP PISKPPVTTP PTTTPPIAKP
0301: PIATPPISTP PAATPPAATP PITTLPPAKP PVAISPIVTP PVTPIAQPPV ATPPTATPPV ATPPIATPPT SKSPISTPPI SESPVATPPT ATSPIKTPPP
0401: AKPPVATPPI AKSPIATPPT ATPPVATPPI EKPPVATPPT TTPPTATPPV AKPPVETPPI ATPPTAKPPI STPPISKPPV ATPPAATPPI TTPTPVKPPV
0501: ATPPLAIPPV AKPPVVTPPT ATPPIATPPI AKSPVATPPT ATPPVATPPI AKPPVVTPPT TTPPTATPPV AKPPVATPPI ATPPTAKPPI STPPISKSPV
0601: ATPPAATPPI TTPPPAKPPV ATPPIATPPI AKPPVATPPT ATPPIATSPV AKPPVATPPI KTPPPAKPPV AIPPIATPPV AKPPVATPPT ATPPIATPPI
0701: ATPPVVTPPT ATPPVATPPI AKPPTTIPPT ATPPVAMPPI ATPPTAKPPI ATPPIAIPPV AKPPVVTPPT ATPPIATPPI AKSPVATPPT ATPPVATPPI
0801: AKPPVATPPT TAPPTATPPV AKPPVATPPI ATPPTAKPPI LTPPISKPPV ATPPAATPPI TTPPPAKPPV ATPPIATPPI AKPPVATPPT ATPPIATSPV
0901: AKPPVAIPPI KTPPPAKPPV AIPPIATPPV AKPPVATPPT ATPPIATSPI ATPPVVTPPT ATSPVATPPI AKPPTTTPPT ATPPVAMPPI ATPPTAKPPV
1001: ATPPIANPPV EKPPVATPPI AKPPTVLPPI AKPPVETSPT ATPPTATPPV AIPPVVKPPV AIPPITKPPV ATPPVTNPPT AMPPIVTPPP IVTPPIAKSP
1101: IATPPVSTPP IAKPPIATPP VATTPIAKPP IATPPTANPP VANPPIAKSP IAKPPIATPP TAMPSIATPP IGKPPVATPP MAKPPVASPP IATPPIIKPP
1201: VATPPITKPP VATPPVATPP IAKPPVATSP IETPPVAKPP VTTPPVATPP IVKPPIVTPP IATPPIAKSP IAPPPIGTPP IAKPPVATPP TATPPVATSP
1301: IAKPPVATPP PATPPVAKPP VATPPTVTPP VATPPIAKPP GARPPVATPP VATPPIAKSP VATPPMTKPP VASSPIATPP IAKTPIATPP TTMPKTCPID
1401: TLKLGSCVDL LGGLVHIGIG KSAKEKCCPV VEGLVDLDAA VCLCTTIKAK LLNIDVILPI ALEVLLNCGK NPPPGFKCPA

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIE8]
SUBAcon: [plasma membrane,vacuole,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.