Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 45.81 | 37.37 |
| Solyc11g039880.1.1 | Tomato | nucleus | 58.71 | 36.79 |
| CDY22413 | Canola | cytosol | 59.14 | 15.64 |
| AT4G38760.1 | Thale cress | cytosol | 60.0 | 14.2 |
| CDX72740 | Canola | cytosol | 58.92 | 13.92 |
| KRH24149 | Soybean | nucleus | 58.49 | 13.84 |
| Bra033575.1-P | Field mustard | cytosol | 58.92 | 13.76 |
| OQU82713 | Sorghum | plastid | 44.52 | 10.56 |
| TraesCS7B01G055100.1 | Wheat | cytosol, plasma membrane, plastid | 44.09 | 10.44 |
| Zm00001d030340_P037 | Maize | plasma membrane | 40.0 | 10.35 |
| HORVU7Hr1G031100.1 | Barley | cytosol | 43.66 | 10.34 |
| TraesCS7A01G151100.1 | Wheat | plastid | 43.66 | 10.34 |
| TraesCS7D01G153000.1 | Wheat | cytosol, plasma membrane, plastid | 43.44 | 10.3 |
| VIT_03s0038g01870.t01 | Wine grape | cytosol | 1.29 | 5.5 |
| Zm00001d030342_P001 | Maize | plastid | 1.29 | 4.2 |
| Os10t0154566-00 | Rice | plastid | 1.29 | 3.77 |
| Solyc11g039890.1.1 | Tomato | cytosol | 1.29 | 3.59 |
| GSMUA_Achr11P... | Banana | plasma membrane | 0.22 | 0.08 |
| Solyc11g039870.1.1 | Tomato | nucleus | 0.0 | 0.0 |
| PGSC0003DMT400056702 | Potato | endoplasmic reticulum, extracellular, plastid | 0.0 | 0.0 |
| Os10t0154600-01 | Rice | peroxisome, plasma membrane, plastid | 0.0 | 0.0 |
| VIT_03s0038g01920.t01 | Wine grape | plasma membrane | 0.0 | 0.0 |
| KRH29119 | Soybean | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| MapMan:23.5.1.1.2.2 | ProteinID:CCB60645 | ProteinID:CCB60645.1 | UniProt:F6I129 | EMBL:FN596508 | GO:GO:0003674 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 |
| GO:GO:0006405 | GO:GO:0006606 | GO:GO:0006810 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0017056 |
| GO:GO:0044611 | InterPro:Nucleoporin_Nup188 | PFAM:PF10487 | PANTHER:PTHR31431 | UniParc:UPI00021085FA | ArrayExpress:VIT_03s0038g01880 |
| EnsemblPlantsGene:VIT_03s0038g01880 | EnsemblPlants:VIT_03s0038g01880.t01 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3:+:1313644..1323526
Molecular Weight (calculated)
52181.6 Da
IEP (calculated)
4.418
GRAVY (calculated)
0.088
Length
465 amino acids
Sequence
(BLAST)
(BLAST)
001: MACDLYGWQD ETDHAQLRSS RACLSSFNAL PRTKERKAVE QEKNKAFQQA LKDVKEIYVG SGSEEGNAIR QEAQSLISDG LESKLLSVLH DLLSSSHPEH
101: MDIDLFTLWA EETLIEDNLI LDILFLAYYE SFCVCNGAQW KKLCLLYKGI ISGSFNFGKL AISPEATHSF YHAKVQLLLI LIETLDLENL LQLIHDEMPF
201: REGCTLFSLT DVQEIDAIIS GFNAFETKEA GPLILTWAVF LCLISSLPGK QENSVLMDID HVGYVRQAFE AASLSYFLEL LQSDILKDSD GPVAGYRSVL
301: RTFVSAFIAS YEINVQLEDN TLKLILDILC KIYRGEESLC NQFWDRESFV DGPIRCLLCN LEGEFPIRTV ELVGFLSALC EGTWPAECVY NFLDKSVGIS
401: SLLEITSDSL VDNISQIIET RVPLHVPGVE GLIIPSQTRG HVLKVIDGNT ALVRWEVNRQ KFSPL
101: MDIDLFTLWA EETLIEDNLI LDILFLAYYE SFCVCNGAQW KKLCLLYKGI ISGSFNFGKL AISPEATHSF YHAKVQLLLI LIETLDLENL LQLIHDEMPF
201: REGCTLFSLT DVQEIDAIIS GFNAFETKEA GPLILTWAVF LCLISSLPGK QENSVLMDID HVGYVRQAFE AASLSYFLEL LQSDILKDSD GPVAGYRSVL
301: RTFVSAFIAS YEINVQLEDN TLKLILDILC KIYRGEESLC NQFWDRESFV DGPIRCLLCN LEGEFPIRTV ELVGFLSALC EGTWPAECVY NFLDKSVGIS
401: SLLEITSDSL VDNISQIIET RVPLHVPGVE GLIIPSQTRG HVLKVIDGNT ALVRWEVNRQ KFSPL
0001: MANPNSVDSS LWWDPFDSLL TDLENASLSD DLPQPIAKKL EENHAWFVGT LSMFKPPSEK SKEALNSDLV KIKEHQLVIK PQLKDKALRI SSHLNLDEIQ
0101: SYILVERSME QEYGTTDSVA QELTQEFIDM ILLQYYIQRQ CLLKCTKRIL IHALYAPREE SSIKEEAVKL ISDGLERRQS SVLEDLLSSC FPKNMDVNLF
0201: TLWAEETLIE DNLILDILFL IYNESYCSCN GERWRKLCSF YKGILSGSYN FSKLAVSVEA QHSACRVQIQ LLMILIETLD MENLLQMVHD GVPFRSGTCV
0301: FSIVDVQEMD ATISSLNTSE VNEAGPLVLA WAVFLCLISS LPGKEESPFL MDIDHVSYVH QAFEAASLSY FLEILQSNLL NDFDGPISGH RSVVRTFISA
0401: FIASYEINLQ LEDGTLELIL DILSKVYQGE ESLCCQFWDR KSFVDGPIRC LLFDLESEFP FRSAEFIRLL SSLSEGSWPA ECVYNFLDKS VGVSTLFDIT
0501: SDSPADDASQ LVETSRPLHI PGLEGLVIPS NTRGRILRVI SENTVLVRWE YSLSGIIVLI IRLANKLYIG NNREAFVTLE LLRRMVTFNK AVCFSLLNIS
0601: HFFYVQESYV NGKMESDVRV VDIICNSVRS LTFDSGGAAV MAMAIDILAK LLRCSPSSVA PMVLKSNIFD MTSCSDVPDS GYNISLSGSW SLSGKLAKMI
0701: LIDCEKNDTS CPLVISVLEF TMQLVEGGLE NDVVFALVVF SLQYILASHE YWKYNHGNMR WKVTLKVIEL MKTCLRFSKF STKLRDVLLD ILLNDASVHS
0801: ALFRIICTTT QNLENLCSSR FIEPAEIEGW QLAIVSVLDV LNVILSQFSE STHSGLPVFH QAMLSSTTKP ISVVAAITSL ISYFRNPTIQ VCAAQVLSKL
0901: FALAESSQLY IISNAGFGLD NKQITDLRNS VTQIVLDLSG QNEHLVVATL KLLTVAARFQ PALLVAIFDS DEDSDSSNVK QSRKDASSIP DWACKSRLLH
1001: TILQYVERAT DFVDRHTDIL LGLLDFLKTL WQEAGQYANM LEPFKASKKL WQEFSDIISQ ASKIKDSTVG SLGKEEISKL LVKYQCQASV LEIMACNMFL
1101: YKKLLFAESL KKPCVETKKT ASNGVSPPKL TWTADSDPKD IFSKWCDISV LDGIIQSVSS LDGESEINFQ AKVAAVLLIV HLIVKLETSG AGALSMVLVE
1201: KIKLISETLC AQPAFSELLA QYSKLGYSGG KELMPMIFSD LYCHLQGKLE GRDIPTGPFK ELFQFLVETS FWEKYKQKTN KDVNMALGDC LFDTQQIQTE
1301: LGIDIWDFSE WKTSKTTAEE MLNYMQRANS MVLLSTSQLS VLHALISVLI LYEDNSLEES AAAERKIPSR VTLLSIDKVC RKFCTTVDSL ASLWDAPKIV
1401: FDILTAQADL LSRLLKSAKK NLSLSVCALV LRNVGPGLKI LGSLRHSNAI LKKTINLLLE VLLLVVGFGS DNSNSSGMGH MVLAKDFAEI SDATIGLLPL
1501: LCNFMGNPEY LTLCLTTVDL ILRNFLTPET WFPIIQSQLR LQHVILQLQD KKSTTSVSAI LKFFLTIAQV HGGAQMLLNS GFFSTLRALL MEFPDGMSTL
1601: VSDNEKGSLL EKTEKTQHIW GIGLAVVTAM VHSLGSVSAG ADIVESVISY FFLEKGYMIS YYLAAPDFPS DDRDKVRLRS QRTWTSLAYL RVTEHTLLLL
1701: CALASHWRSW VKIMKDMDSP LREMTIHLLA FISKGAQRLR ESQSHISHLL CPPVAKEEFD SCKRPSFINT KHGWFSLAPL VCVGKPKITA VSISTALVVR
1801: GDTTEHPGSV PQSQFSDSVA IQIYRVASLL LKFLCLQAEG VVTRAEEVGY VDIAHFPELP EPEILHGLQD QATAIVAELC DNYKSKEIPD EVKKLCLMLI
1901: QTTEMSLYLE LCVVQVCRIH PVFGRVDNFS KDLKKLVKAA EVHTYLEPSI DSLKKIAAFL YPGSL
0101: SYILVERSME QEYGTTDSVA QELTQEFIDM ILLQYYIQRQ CLLKCTKRIL IHALYAPREE SSIKEEAVKL ISDGLERRQS SVLEDLLSSC FPKNMDVNLF
0201: TLWAEETLIE DNLILDILFL IYNESYCSCN GERWRKLCSF YKGILSGSYN FSKLAVSVEA QHSACRVQIQ LLMILIETLD MENLLQMVHD GVPFRSGTCV
0301: FSIVDVQEMD ATISSLNTSE VNEAGPLVLA WAVFLCLISS LPGKEESPFL MDIDHVSYVH QAFEAASLSY FLEILQSNLL NDFDGPISGH RSVVRTFISA
0401: FIASYEINLQ LEDGTLELIL DILSKVYQGE ESLCCQFWDR KSFVDGPIRC LLFDLESEFP FRSAEFIRLL SSLSEGSWPA ECVYNFLDKS VGVSTLFDIT
0501: SDSPADDASQ LVETSRPLHI PGLEGLVIPS NTRGRILRVI SENTVLVRWE YSLSGIIVLI IRLANKLYIG NNREAFVTLE LLRRMVTFNK AVCFSLLNIS
0601: HFFYVQESYV NGKMESDVRV VDIICNSVRS LTFDSGGAAV MAMAIDILAK LLRCSPSSVA PMVLKSNIFD MTSCSDVPDS GYNISLSGSW SLSGKLAKMI
0701: LIDCEKNDTS CPLVISVLEF TMQLVEGGLE NDVVFALVVF SLQYILASHE YWKYNHGNMR WKVTLKVIEL MKTCLRFSKF STKLRDVLLD ILLNDASVHS
0801: ALFRIICTTT QNLENLCSSR FIEPAEIEGW QLAIVSVLDV LNVILSQFSE STHSGLPVFH QAMLSSTTKP ISVVAAITSL ISYFRNPTIQ VCAAQVLSKL
0901: FALAESSQLY IISNAGFGLD NKQITDLRNS VTQIVLDLSG QNEHLVVATL KLLTVAARFQ PALLVAIFDS DEDSDSSNVK QSRKDASSIP DWACKSRLLH
1001: TILQYVERAT DFVDRHTDIL LGLLDFLKTL WQEAGQYANM LEPFKASKKL WQEFSDIISQ ASKIKDSTVG SLGKEEISKL LVKYQCQASV LEIMACNMFL
1101: YKKLLFAESL KKPCVETKKT ASNGVSPPKL TWTADSDPKD IFSKWCDISV LDGIIQSVSS LDGESEINFQ AKVAAVLLIV HLIVKLETSG AGALSMVLVE
1201: KIKLISETLC AQPAFSELLA QYSKLGYSGG KELMPMIFSD LYCHLQGKLE GRDIPTGPFK ELFQFLVETS FWEKYKQKTN KDVNMALGDC LFDTQQIQTE
1301: LGIDIWDFSE WKTSKTTAEE MLNYMQRANS MVLLSTSQLS VLHALISVLI LYEDNSLEES AAAERKIPSR VTLLSIDKVC RKFCTTVDSL ASLWDAPKIV
1401: FDILTAQADL LSRLLKSAKK NLSLSVCALV LRNVGPGLKI LGSLRHSNAI LKKTINLLLE VLLLVVGFGS DNSNSSGMGH MVLAKDFAEI SDATIGLLPL
1501: LCNFMGNPEY LTLCLTTVDL ILRNFLTPET WFPIIQSQLR LQHVILQLQD KKSTTSVSAI LKFFLTIAQV HGGAQMLLNS GFFSTLRALL MEFPDGMSTL
1601: VSDNEKGSLL EKTEKTQHIW GIGLAVVTAM VHSLGSVSAG ADIVESVISY FFLEKGYMIS YYLAAPDFPS DDRDKVRLRS QRTWTSLAYL RVTEHTLLLL
1701: CALASHWRSW VKIMKDMDSP LREMTIHLLA FISKGAQRLR ESQSHISHLL CPPVAKEEFD SCKRPSFINT KHGWFSLAPL VCVGKPKITA VSISTALVVR
1801: GDTTEHPGSV PQSQFSDSVA IQIYRVASLL LKFLCLQAEG VVTRAEEVGY VDIAHFPELP EPEILHGLQD QATAIVAELC DNYKSKEIPD EVKKLCLMLI
1901: QTTEMSLYLE LCVVQVCRIH PVFGRVDNFS KDLKKLVKAA EVHTYLEPSI DSLKKIAAFL YPGSL
Arabidopsis Description
Protein of unknown function (DUF3414) [Source:TAIR;Acc:AT4G38760]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.