Factsheet for VIT_03s0180g00280.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus, cytosol

Predictor Summary:

cytosol 3
plasma membrane 1
mitochondrion 1
nucleus 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35745	Soybean	golgi	61.02	56.74
VIT_05s0094g01020.t01	Wine grape	cytosol, nucleus, plastid	17.35	48.3
VIT_05s0094g01060.t01	Wine grape	cytosol	26.73	44.41
VIT_01s0026g00630.t01	Wine grape	cytosol, golgi, plastid	38.57	41.27
VIT_03s0091g00040.t01	Wine grape	plastid	40.2	41.21
VIT_05s0094g01040.t01	Wine grape	mitochondrion	35.92	41.03
VIT_03s0180g00320.t01	Wine grape	plastid	40.0	40.92
VIT_03s0180g00200.t01	Wine grape	plastid	39.8	40.71
VIT_17s0000g07790.t01	Wine grape	cytosol, peroxisome, plastid	37.35	40.04
VIT_05s0094g00960.t01	Wine grape	plastid	37.14	39.82
VIT_07s0151g00540.t01	Wine grape	cytosol	36.94	39.69
VIT_07s0289g00080.t01	Wine grape	cytosol	36.73	39.47
VIT_05s0094g01050.t01	Wine grape	cytosol	36.94	39.43
VIT_05s0062g00710.t01	Wine grape	plastid	37.14	39.31
VIT_05s0062g00640.t01	Wine grape	plastid	37.55	39.23
VIT_09s0002g06590.t01	Wine grape	cytosol, extracellular, golgi	33.06	39.23
VIT_05s0062g00700.t01	Wine grape	plastid	37.14	39.22
VIT_07s0289g00050.t01	Wine grape	cytosol	36.12	38.82
VIT_07s0289g00060.t01	Wine grape	cytosol	31.02	38.68
VIT_05s0094g00990.t01	Wine grape	cytosol	36.12	38.65
VIT_05s0094g01000.t01	Wine grape	plastid	35.71	38.63
VIT_05s0062g00630.t01	Wine grape	plastid	36.73	38.38
VIT_05s0062g00350.t01	Wine grape	plastid	36.33	38.28
VIT_05s0062g00270.t01	Wine grape	plastid	35.92	37.85
VIT_05s0062g00430.t01	Wine grape	mitochondrion, plastid	35.92	37.77
VIT_05s0062g00310.t01	Wine grape	plastid	33.06	37.67
VIT_05s0062g00570.t01	Wine grape	plastid	34.69	37.28
VIT_05s0062g00460.t01	Wine grape	mitochondrion, plastid	35.31	37.2
VIT_05s0062g00470.t01	Wine grape	plastid	34.9	36.93
VIT_05s0062g00590.t01	Wine grape	plastid	34.49	36.5
VIT_05s0062g00740.t01	Wine grape	plastid	32.86	36.02
VIT_05s0062g00720.t01	Wine grape	plastid	27.35	33.33
VIT_05s0062g00300.t01	Wine grape	plastid	35.51	32.83
VIT_05s0062g00400.t01	Wine grape	cytosol, plastid	33.27	25.71
VIT_05s0094g01030.t01	Wine grape	cytosol	36.53	21.46

Protein Annotations

EntrezGene:100252177	wikigene:100252177	Gene3D:3.40.50.2000	MapMan:50.2.4	EMBL:AM481108	ProteinID:CAN66325
ProteinID:CAN66325.1	ProteinID:CCB62345	ProteinID:CCB62345.1	ncoils:Coil	UniProt:F6I5X7	EMBL:FN596754
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	GO:GO:0016758	GO:GO:0043231	GO:GO:0080043
GO:GO:0080044	EntrezGene:LOC100252177	wikigene:LOC100252177	PFAM:PF00201	ScanProsite:PS00375	PANTHER:PTHR11926
PANTHER:PTHR11926:SF726	SUPFAM:SSF53756	TIGR:TC68160	InterPro:UDP_glucos_trans	InterPro:UDP_glycos_trans_CS	UniParc:UPI00015C90C5
ArrayExpress:VIT_03s0180g00280	EnsemblPlantsGene:VIT_03s0180g00280	EnsemblPlants:VIT_03s0180g00280.t01	unigene:Vvi.13944	unigene:Vvi.25310	RefSeq:XP_002285408
RefSeq:XP_002285408.1	RefSeq:XP_010647893.1	SEG:seg	:	:	:

Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:F6I5X7]

Coordinates

chr3:+:6255489..6257208

Molecular Weight (calculated)

54469.8 Da

IEP (calculated)

5.350

GRAVY (calculated)

-0.114

Length

490 amino acids

Sequence
(BLAST)

001: MALKEEVKEE IHVLMVSFSA QGHINPMLRL GKRLVSKGLD VTLALTEFTR QRMLKSTTTT TTNCVSGIQL EFFSDGFSLD YDRKTNLDHY METLGKMGPI
101: NLSKLIQDRS QSGLGKFSCL ISNPFVPWVA DVAAEHGIPC ALLWIQPSIL YAIYYRFYNS LNQFPTLENP HMSVELPGLP LLNTEDLPSF VLPSNPFGSF
201: PKLFSEMFQN MKKIKWVLGN SFHELEKDAI VSMAELCPIR TVGPLVPSML LGEDQSADIG VEMWKPEETC LEWLKQKKPC SVVYVSFGSI VVLSAKQMEN
301: IATGLKNSNR PFLWVVKPQD PPASDGSGKL PVGFLEETKD QGLVVPWCPQ TMVLTHPSIS CFLSHCGWNS TLETIAAGVP VIAYPQWTDQ PTNAKLIVDV
401: LRIGVRLRPN QDGIVTNEEV EKSIEEITVG PRAEEVKKTA AELKQLAQKA VVKGGSSDSN IQWFVDEIKG NSITDPSRST AVQLNHEDIE

Best Arabidopsis Sequence Match ( AT2G23260.1 )
(BLAST)

001: MGSSEGQETH VLMVTLPFQG HINPMLKLAK HLSLSSKNLH INLATIESAR DLLSTVEKPR YPVDLVFFSD GLPKEDPKAP ETLLKSLNKV GAMNLSKIIE
101: EKRYSCIISS PFTPWVPAVA ASHNISCAIL WIQACGAYSV YYRYYMKTNS FPDLEDLNQT VELPALPLLE VRDLPSFMLP SGGAHFYNLM AEFADCLRYV
201: KWVLVNSFYE LESEIIESMA DLKPVIPIGP LVSPFLLGDG EEETLDGKNL DFCKSDDCCM EWLDKQARSS VVYISFGSML ETLENQVETI AKALKNRGLP
301: FLWVIRPKEK AQNVAVLQEM VKEGQGVVLE WSPQEKILSH EAISCFVTHC GWNSTMETVV AGVPVVAYPS WTDQPIDARL LVDVFGIGVR MRNDSVDGEL
401: KVEEVERCIE AVTEGPAAVD IRRRAAELKR VARLALAPGG SSTRNLDLFI SDITIA

Arabidopsis Description

UGT84B1UDP-glycosyltransferase 84B1 [Source:UniProtKB/Swiss-Prot;Acc:O22182]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.