Factsheet for VIT_05s0049g02220.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075191	Potato	nucleus	65.03	66.21
Solyc12g096990.1.1	Tomato	nucleus	65.18	65.86
PGSC0003DMT400003956	Potato	nucleus	67.26	64.94
Solyc09g090810.1.1	Tomato	nucleus	67.11	64.8
CDX78210	Canola	nucleus	56.7	60.38
CDX73506	Canola	nucleus	56.85	60.35
Bra007048.1-P	Field mustard	nucleus	56.55	60.22
AT2G33290.2	Thale cress	nucleus	57.14	58.99
AT4G13460.2	Thale cress	nucleus	56.99	58.92
KRH49479	Soybean	nucleus	61.46	58.25
KRG89164	Soybean	nucleus	61.76	57.96
CDY37735	Canola	nucleus, plastid	53.57	56.51
CDY23755	Canola	nucleus	53.27	56.2
Bra021840.1-P	Field mustard	nucleus, plastid	53.27	56.2
GSMUA_Achr4P29270_001	Banana	nucleus	43.3	54.09
GSMUA_Achr5P13120_001	Banana	nucleus	48.81	54.04
KRH07636	Soybean	nucleus	45.68	53.39
GSMUA_Achr1P01130_001	Banana	nucleus	43.01	52.55
Os07t0435900-01	Rice	nucleus	53.12	52.19
CDY19475	Canola	nucleus	42.71	51.99
TraesCS2A01G235400.1	Wheat	nucleus	51.79	51.94
HORVU2Hr1G053260.1	Barley	nucleus	51.93	51.78
TraesCS2D01G240000.1	Wheat	nucleus	51.79	51.56
CDY17156	Canola	nucleus	43.3	51.41
TraesCS2B01G254700.1	Wheat	nucleus	51.34	51.26
EER96294	Sorghum	nucleus	52.68	49.86
Zm00001d005445_P001	Maize	nucleus	40.77	47.99
Bra005511.1-P	Field mustard	plastid	43.3	47.47
GSMUA_Achr6P36730_001	Banana	nucleus	40.33	45.93
Zm00001d019520_P001	Maize	nucleus	40.18	41.1
VIT_16s0013g00310.t01	Wine grape	nucleus	24.11	35.06
VIT_14s0068g01090.t01	Wine grape	nucleus	25.6	32.76
VIT_01s0150g00070.t01	Wine grape	nucleus	22.92	31.62
VIT_13s0047g00120.t01	Wine grape	nucleus	33.33	31.28
VIT_08s0040g00360.t01	Wine grape	nucleus	34.08	31.07
VIT_16s0013g00650.t01	Wine grape	nucleus	25.6	29.55
VIT_00s0309g00020.t01	Wine grape	nucleus	28.72	26.62
VIT_08s0056g01660.t01	Wine grape	nucleus	12.5	26.33
VIT_05s0049g01800.t01	Wine grape	nucleus	12.95	15.54
VIT_07s0005g04190.t01	Wine grape	mitochondrion, nucleus	16.07	12.74
VIT_04s0023g00980.t01	Wine grape	nucleus	17.41	7.71

Protein Annotations

KEGG:00310+2.1.1.43	EntrezGene:100261297	wikigene:100261297	MapMan:12.3.3.7	MapMan:12.5.1.1	Gene3D:2.170.270.10
Gene3D:2.30.280.10	ProteinID:CCB48639	ProteinID:CCB48639.1	UniProt:F6H8U6	EMBL:FN595496	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009987	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538
GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	EntrezGene:LOC100261297	wikigene:LOC100261297	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033
PFscan:PS50280	PFscan:PS50867	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF95
InterPro:PUA-like_sf	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468
InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI00015C7899	ArrayExpress:VIT_05s0049g02220
EnsemblPlantsGene:VIT_05s0049g02220	EnsemblPlants:VIT_05s0049g02220.t01	unigene:Vvi.21461	RefSeq:XP_002282386	RefSeq:XP_002282386.1	RefSeq:XP_010650174.1
RefSeq:XP_010650175.1	RefSeq:XP_010650176.1	RefSeq:XP_010650177.1	RefSeq:XP_019075644.1	RefSeq:XP_019075645.1	SEG:seg

Description

No Description!

Coordinates

chr5:-:9810052..9821392

Molecular Weight (calculated)

75833.5 Da

IEP (calculated)

6.022

GRAVY (calculated)

-0.309

Length

672 amino acids

Sequence
(BLAST)

001: MGSLIPFQDL NLLPDPATSP STAATAITPA LIFPKIEPKL EPFDAPTLPL QSFPQNPSPN FFVNSGQLPF VGPGSNPNDT VFSQTPEGSP EENNVYSEYY
101: RISELFRTAF SKRMENLGNI EVLDPDSRAI VPVPEETRIS NVVVSRRRDQ RSSELVRVTD LTIDHVRYFR DLVRRTRMLY DALRIFSMME EEKRREVGLI
201: TRRSRGDLRA AKLMKDRGLW LNRDKRIVGS IPGINIGDLF LFRMELCVVG LHGQAQAGID YLPGSRSSNG EPIATSIIVS GGYEDDQDEG DVLIYTGHGG
301: QDKFSRQCDH QKLEGGNLAL ERSMHYGIEV RVIRGIKYEG SVTGKVYVYD GLYKIHDSWF DVGKSGFGVY KYKLLRNEGQ AEMGSAILRF AENLRVSPLT
401: VRPVGYLCDD LSTKKENIPV FLFNDIDGDN EPMYYEYLPR TVFPLHAYNL GGNGSGCDCV AGCTDDCVCA QRNGGEFAYD QNGFLLRGKP VIFECGSFCR
501: CPPTCRNRLT QKGLRNRFEV FRSRETGWGV RSLDLIQAGA FICEYAGVVL TREQAALFSM NGDTLIYPNR FTDRWAEWGD FSKVYSDYVR PMHPSIPPLD
601: FAMDVSRMRN LACYMSHSSC PNVLVQFVLY DHHNLLFPRL MLFAMENIPP LRELSLDYGV ADEWTGKLPI CN

Best Arabidopsis Sequence Match ( AT2G33290.1 )
(BLAST)

001: MSTLLPFPDL NLMPDSQSST AGTTAGDTVV TGKLEVKSEP IEEWQTPPSS TSDQSANTDL IAEFIRISEL FRSAFKPLQV KGLDGVSVYG LDSGAIVAVP
101: EKENRELIEP PPGFKDNRVS TVVVSPKFER PRELARIAIL GHEQRKELRQ VMKRTRMTYE SLRIHLMAES MKNHVLGQGR RRRSDMAAAY IMRDRGLWLN
201: YDKHIVGPVT GVEVGDIFFY RMELCVLGLH GQTQAGIDCL TAERSATGEP IATSIVVSGG YEDDEDTGDV LVYTGHGGQD HQHKQCDNQR LVGGNLGMER
301: SMHYGIEVRV IRGIKYENSI SSKVYVYDGL YKIVDWWFAV GKSGFGVFKF RLVRIEGQPM MGSAVMRFAQ TLRNKPSMVR PTGYVSFDLS NKKENVPVFL
401: YNDVDGDQEP RHYEYIAKAV FPPGIFGQGG ISRTGCECKL SCTDDCLCAR KNGGEFAYDD NGHLLKGKHV VFECGEFCTC GPSCKSRVTQ KGLRNRLEVF
501: RSKETGWGVR TLDLIEAGAF ICEYAGVVVT RLQAEILSMN GDVMVYPGRF TDQWRNWGDL SQVYPDFVRP NYPSLPPLDF SMDVSRMRNV ACYISHSKEP
601: NVMVQFVLHD HNHLMFPRVM LFALENISPL AELSLDYGLA DEVNGKLAIC N

Arabidopsis Description

SUVH2Histone-lysine N-methyltransferase family member SUVH2 [Source:UniProtKB/Swiss-Prot;Acc:O22781]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.