Factsheet for VIT_07s0005g04190.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, mitochondrion

Predictor Summary:

nucleus 5
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0049g01800.t01	Wine grape	nucleus	36.79	55.71
PGSC0003DMT400051920	Potato	nucleus	31.13	51.87
TraesCSU01G137800.1	Wheat	nucleus	24.88	50.6
KRH34133	Soybean	nucleus	39.98	49.42
KRH68776	Soybean	nucleus	38.8	48.6
KRG97025	Soybean	nucleus	16.16	48.24
CDX92067	Canola	nucleus	26.53	47.67
KRG92731	Soybean	nucleus	39.98	47.55
Zm00001d051126_P004	Maize	nucleus	28.42	47.53
KRH32246	Soybean	nucleus	45.99	47.5
GSMUA_Achr1P20340_001	Banana	nucleus	39.62	47.32
KRG95723	Soybean	nucleus	40.21	47.1
AT3G04380.1	Thale cress	nucleus	27.0	46.54
KRH19618	Soybean	nucleus	45.05	46.47
Bra036004.1-P	Field mustard	nucleus	34.08	46.24
CDY14903	Canola	nucleus	34.55	45.78
Solyc09g072890.1.1	Tomato	nucleus	43.75	44.97
Solyc06g083760.2.1	Tomato	nucleus	45.52	44.83
TraesCS2B01G503200.1	Wheat	nucleus	31.49	44.43
TraesCS2D01G478100.1	Wheat	nucleus	31.25	44.31
TraesCS2A01G478800.1	Wheat	nucleus	30.9	43.67
CDX94744	Canola	nucleus	35.02	43.36
OQU85329	Sorghum	nucleus	34.43	43.07
CDY22319	Canola	nucleus	35.73	42.98
TraesCS6A01G226600.1	Wheat	nucleus	34.08	42.44
TraesCS6D01G208400.1	Wheat	nucleus	34.08	42.44
Os02t0621100-01	Rice	nucleus	36.91	42.24
TraesCS2D01G378500.3	Wheat	nucleus	33.61	42.04
TraesCS6B01G255000.1	Wheat	nucleus	33.61	41.85
TraesCS2A01G382000.5	Wheat	nucleus	33.37	41.8
AT5G43990.9	Thale cress	nucleus	36.32	41.62
TraesCS2B01G399300.4	Wheat	nucleus	32.9	41.21
Bra033710.1-P	Field mustard	nucleus	36.08	40.8
CDY49341	Canola	nucleus	26.42	40.22
HORVU2Hr1G107560.8	Barley	mitochondrion, nucleus	34.08	39.75
AT1G04050.1	Thale cress	nucleus	34.32	39.65
HORVU7Hr1G064110.6	Barley	nucleus, plastid	28.42	39.64
TraesCS2D01G477200.1	Wheat	mitochondrion, nucleus	34.43	39.57
EES15150	Sorghum	nucleus	34.43	39.51
TraesCS2A01G478000.1	Wheat	mitochondrion, nucleus	34.43	39.19
HORVU2Hr1G127700.1	Barley	nucleus	32.67	39.18
TraesCS2B01G501300.2	Wheat	mitochondrion, nucleus	33.96	38.92
Zm00001d049884_P006	Maize	nucleus	34.08	38.9
Zm00001d031851_P002	Maize	nucleus	33.84	38.52
CDX96935	Canola	nucleus	35.26	38.14
TraesCS2D01G566400.1	Wheat	nucleus	32.55	37.45
TraesCS2B01G616200.1	Wheat	nucleus	32.31	37.18
EES13161	Sorghum	nucleus	34.08	36.68
HORVU6Hr1G057990.5	Barley	nucleus	34.08	35.81
HORVU2Hr1G127770.1	Barley	nucleus	29.72	35.64
Zm00001d002938_P001	Maize	nucleus	28.3	33.76
Bra001104.1-P	Field mustard	nucleus	27.36	30.69
CDY42922	Canola	plasma membrane, vacuole	26.3	26.93
VIT_08s0056g01660.t01	Wine grape	nucleus	9.43	25.08
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	26.42	23.78
VIT_16s0013g00310.t01	Wine grape	nucleus	12.62	23.16
VIT_14s0068g01090.t01	Wine grape	nucleus	13.8	22.29
VIT_01s0150g00070.t01	Wine grape	nucleus	12.5	21.77
VIT_16s0013g00650.t01	Wine grape	nucleus	12.85	18.73
VIT_00s0309g00020.t01	Wine grape	nucleus	14.5	16.97
VIT_05s0049g02220.t01	Wine grape	nucleus	12.74	16.07
VIT_13s0047g00120.t01	Wine grape	nucleus	13.44	15.92
VIT_08s0040g00360.t01	Wine grape	nucleus	13.8	15.88
VIT_04s0023g00980.t01	Wine grape	nucleus	17.45	9.76
CDY42923	Canola	mitochondrion	0.0	0.0
CDX92068	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	Gene3D:1.10.8.850	EntrezGene:100243013	wikigene:100243013	MapMan:12.3.3.7	ProteinID:CCB60168
ProteinID:CCB60168.1	UniProt:F6HZQ2	EMBL:FN596502	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:IPR001214	InterPro:IPR007728
InterPro:IPR025776	EntrezGene:LOC100243013	wikigene:LOC100243013	PFAM:PF00856	PFAM:PF05033	PFAM:PF10440
PFscan:PS50280	PFscan:PS50867	PFscan:PS51580	PANTHER:PTHR22884	PANTHER:PTHR22884:SF460	InterPro:Pre-SET_dom
InterPro:SET_dom	SMART:SM00317	SMART:SM00468	SUPFAM:SSF82199	InterPro:SUVR4/1/2	UniParc:UPI000210A2BF
ArrayExpress:VIT_07s0005g04190	EnsemblPlantsGene:VIT_07s0005g04190	EnsemblPlants:VIT_07s0005g04190.t01	InterPro:WIYLD_domain	RefSeq:XP_002270320	RefSeq:XP_002270320.2

Description

No Description!

Coordinates

chr7:-:7299438..7313963

Molecular Weight (calculated)

94137.6 Da

IEP (calculated)

5.423

GRAVY (calculated)

-0.489

Length

848 amino acids

Sequence
(BLAST)

001: MARNPRVLAA YRAMRALGIA EATVKPVLKN LLRLYEKNWE LIEEENYRAL ADAIFEYEET KQDNILGGET QLHDEPARPL KRLRLRNQES QVSPSLANSS
101: QTLGGAVMKR PKLEDAEQPQ TLAERQPQGI AETPEPSVGN IRPELHPVSS PQAHLVNKGK QPALPQPLAV QGRSDLSPTS ATKRAESDLL HTQQRLRDKG
201: KEPLSPQIAA KEKRSIPVRS FHLNAEPGII LSPKQKVHDT PALMKPKDEP FTDDILQLEV PIAVIHPDPL HKGNLPENYS TGKLDGPQPP VNSRVDGEDE
301: VNGGPASSSG AGTNCELANI SNLEIASSPL GEVKISLSCN SALGKPDFRM PSLDTLLKLV EDKCLRSYKI IDPNFSVTKL MRDMCDCFLE LGTHTEESHE
401: GSINTTPTGD LLGKSTAPDA VGSCGDEENF SMSSCITNGS FKIQCSTEVA VPQIPRLLSS SLNGLGDHIQ LDSKITENSC RENGQEKETN GPNNANSLSL
501: VVVQQRQLTP DDIRFIHDVD DITKGEEKVR IPLVNETNSE FPTPFHYISQ NLVFQNAYMN LSLARIGIEN CCSTCFGDCL SSSTPCACAC ESGGDFAYTL
601: EGLVKEDFLE ECISRNRDPQ QHQLAFCQEC PLERSKAEDI LEPCKGHIVR KFIKECWSKC GCSKQCRNRL VQRGITCNFQ VFLTPDGKGW GLRTLEDLPK
701: GSFVCEYVGE ILTTVELYER NMQSTSRGKQ TYPVLLDADW ALRGILKDEE ALCLDATFYG NVARFINHRC LDANLVEIPV EVESPDHHYY HLALFTTRKV
801: NALEELTWDY GIDFDDQDHP VKTFRCCCGS KFCRNMKRTR SRSALSLG

Best Arabidopsis Sequence Match ( AT5G43990.2 )
(BLAST)

001: MRSYNLFHES NPTISFSFVG AETMAPNLHI KKAFMAMRAM GIEDARVKPV LKNLLALYEK NWELIAEDNY RVLADAIFDS HEDQAIQESE EKKADEVKED
101: EGCAAEVDRG KKKLHESIED DEDVMAESDR PLKRLRRRGE GGSALASPSL GSPTLEGPSI NDEENAPILL PYHPVPIEND HDAGELILTK VEPITNMPLS
201: SIPDSVDRGD SSMLEIDKSN GHVEEKAGET VSTADGTTND ISPTTVARFS DHKLAATIEE PPALELASSA SGEVKINLSF APATGGSNPH LPSMEELRRA
301: MEEKCLRSYK ILDPNFSVLG FMNDICSCYL DLATNGRDSA NQLPKNLPFV TTNIDALKKS AARMAYTSQA SNDVVEICSN EHMRDAENGA VGDSMALVVV
401: PECQLSADEW RLISSVGDIS LGKETVEIPW VNEVNDKVPP VFHYIAQSLV YQDAAVKFSL GNIRDDQCCS SCCGDCLAPS MACRCATAFN GFAYTVDGLL
501: QEDFLEQCIS EARDPRKQML LYCKECPLEK AKKEVILEPC KGHLKRKAIK ECWSKCGCMK NCGNRVVQQG IHNKLQVFFT PNGRGWGLRT LEKLPKGAFV
601: CELAGEILTI PELFQRISDR PTSPVILDAY WGSEDISGDD KALSLEGTHY GNISRFINHR CLDANLIEIP VHAETTDSHY YHLAFFTTRE IDAMEELTWD
701: YGVPFNQDVF PTSPFHCQCG SDFCRVRKQI SKGKNVKKRA

Arabidopsis Description

SUVR2SET-domain containing protein lysine methyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:F4K7E3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.