Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0174g00320.t01 | Wine grape | nucleus | 36.67 | 50.0 |
| KRH58717 | Soybean | nucleus | 43.81 | 45.77 |
| KRH42611 | Soybean | extracellular | 40.48 | 36.8 |
Protein Annotations
| EntrezGene:100244629 | wikigene:100244629 | MapMan:15.3.3.1.6 | ProteinID:CBI30966 | ProteinID:CBI30966.3 | UniProt:D7TKE4 |
| EMBL:FN595992 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006139 | GO:GO:0008134 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016592 | GO:GO:0045944 | EntrezGene:LOC100244629 |
| wikigene:LOC100244629 | PANTHER:PTHR22536 | PANTHER:PTHR22536:SF2 | TIGR:TC62015 | UniParc:UPI0001984315 | ArrayExpress:VIT_10s0003g04260 |
| EnsemblPlantsGene:VIT_10s0003g04260 | EnsemblPlants:VIT_10s0003g04260.t01 | unigene:Vvi.11009 | RefSeq:XP_002280511 | RefSeq:XP_002280511.1 | RefSeq:XP_010655700.1 |
| RefSeq:XP_019078263.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr10:-:7311865..7330981
Molecular Weight (calculated)
24435.1 Da
IEP (calculated)
10.359
GRAVY (calculated)
-1.295
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MDADYKKFGK GPRELSGAVD LINHYKLLPH HEFFCKRSLP LSISETHYLR SVVGGTEIRK GEGMELDQLF HSTFYLRERN AGIHPFDLDI LREAFQMRET
101: TPVELSSAEK GIPTCVPKSK NEPKDKERKH KKSKDKAKDR KKHRHHPKDS SSDKNKDKCR IGNRDSGIEQ KQQDKKRKHD GNGDVSYIQS HLKTERRNSQ
201: IKMGMQRETR
101: TPVELSSAEK GIPTCVPKSK NEPKDKERKH KKSKDKAKDR KKHRHHPKDS SSDKNKDKCR IGNRDSGIEQ KQQDKKRKHD GNGDVSYIQS HLKTERRNSQ
201: IKMGMQRETR
001: MEPERLKFGG PRELCGAADL ISQFKLVQHH EFFCKKSLPV SLSDSHYLHN VVGDTEIRKG EGMQLDQLIE SISQSRETNI RIQPFDIDEL QESFQLNDMT
101: PVELPPAEKG APTIPSKSKS ESKDRDRKHK KHKDRDKDKD REHKKHKHKH KDRSKDKDKD KDRDRKKDKN GHHDSGDHSK KHHDKKRKHD GDEDLNDVQR
201: HKKNKHKSSK LDEVGAIRVA G
101: PVELPPAEKG APTIPSKSKS ESKDRDRKHK KHKDRDKDKD REHKKHKHKH KDRSKDKDKD KDRDRKKDKN GHHDSGDHSK KHHDKKRKHD GDEDLNDVQR
201: HKKNKHKSSK LDEVGAIRVA G
Arabidopsis Description
MED19AMediator of RNA polymerase II transcription subunit 19a [Source:UniProtKB/Swiss-Prot;Acc:Q9FMP0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.