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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
ChloroP:plastid
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_03s0017g00300.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G73100.1 VIT_03s0017g00300.t01 AT5G09540.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009408.1-P Field mustard nucleus 44.83 62.7
KRH56252 Soybean nucleus 18.3 61.5
KRH62706 Soybean nucleus 56.56 60.72
Bra005829.1-P Field mustard nucleus 54.61 60.62
KRH13229 Soybean nucleus 56.15 59.73
AT5G04940.2 Thale cress nucleus 55.87 59.7
Bra009409.1-P Field mustard nucleus 55.03 59.25
KRH20576 Soybean nucleus 55.17 58.69
Bra028776.1-P Field mustard nucleus 51.68 58.27
AT1G73100.1 Thale cress nucleus 53.35 57.1
VIT_08s0040g00360.t01 Wine grape nucleus 57.96 56.31
Bra016018.1-P Field mustard nucleus 52.37 55.39
GSMUA_Achr5P27620_001 Banana nucleus 40.36 46.76
TraesCS1B01G378900.1 Wheat nucleus 43.3 45.99
TraesCS1D01G366800.1 Wheat nucleus 43.3 45.86
Os05t0490700-01 Rice extracellular 43.02 45.83
TraesCS1A01G362000.1 Wheat nucleus 43.02 45.56
Os12t0128450-00 Rice nucleus 38.83 45.28
Zm00001d010646_P001 Maize plastid 41.2 45.25
TraesCS1B01G319000.1 Wheat nucleus 42.46 45.1
EES19725 Sorghum nucleus 42.18 44.81
TraesCS1D01G307700.1 Wheat nucleus 42.04 44.66
Zm00001d038541_P002 Maize nucleus 43.16 44.65
TraesCS1A01G308300.1 Wheat nucleus 41.76 44.36
Os11t0131600-00 Rice nucleus 41.06 44.28
TraesCS4B01G280000.1 Wheat nucleus 44.27 43.72
EES01635 Sorghum nucleus 43.16 41.64
Os01t0811300-01 Rice nucleus, plasma membrane 42.74 41.58
TraesCS5A01G140500.1 Wheat nucleus 39.53 41.5
TraesCS5D01G152000.1 Wheat nucleus 39.66 41.28
TraesCS4D01G278500.1 Wheat nucleus 46.37 40.54
TraesCS3B01G366900.1 Wheat nucleus 41.62 40.11
TraesCS3B01G367200.1 Wheat nucleus 41.62 40.11
Os11t0602200-01 Rice nucleus 45.53 40.1
TraesCS5B01G138800.1 Wheat nucleus 39.66 40.0
TraesCS3A01G336100.1 Wheat nucleus 41.62 40.0
TraesCS4A01G023500.1 Wheat nucleus 46.51 39.93
VIT_16s0013g00310.t01 Wine grape nucleus 25.7 39.83
Zm00001d041005_P001 Maize nucleus 38.83 39.77
TraesCS3D01G329100.1 Wheat nucleus 41.06 39.57
EES10399 Sorghum nucleus 45.11 39.44
OQU78645 Sorghum nucleus 41.06 39.41
EER96081 Sorghum nucleus 45.39 39.16
Zm00001d043135_P003 Maize nucleus 42.46 39.02
TraesCS3A01G385200.1 Wheat plastid 39.53 38.98
TraesCS3B01G417400.1 Wheat nucleus 44.13 37.94
Zm00001d019195_P001 Maize nucleus 45.25 37.85
VIT_14s0068g01090.t01 Wine grape nucleus 26.82 36.57
TraesCS3D01G378200.1 Wheat plastid 34.36 35.91
VIT_01s0150g00070.t01 Wine grape nucleus 24.3 35.73
VIT_16s0013g00650.t01 Wine grape nucleus 28.21 34.71
VIT_05s0049g02220.t01 Wine grape nucleus 31.28 33.33
VIT_00s0309g00020.t01 Wine grape nucleus 32.82 32.41
VIT_08s0056g01660.t01 Wine grape nucleus 12.71 28.53
VIT_05s0049g01800.t01 Wine grape nucleus 14.66 18.75
VIT_07s0005g04190.t01 Wine grape mitochondrion, nucleus 15.92 13.44
VIT_04s0023g00980.t01 Wine grape nucleus 19.83 9.36
HORVU6Hr1G090170.1 Barley cytosol 0.14 0.8
Protein Annotations
KEGG:00310+2.1.1.43EntrezGene:100262508wikigene:100262508MapMan:12.3.3.7MapMan:12.5.1.16.1Gene3D:2.170.270.10
Gene3D:2.30.280.10ProteinID:CCB52193ProteinID:CCB52193.1UniProt:F6HIW8EMBL:FN595767GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0005694GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0008270GO:GO:0009987GO:GO:0016043GO:GO:0016571GO:GO:0016740GO:GO:0018024
GO:GO:0019538GO:GO:0032259GO:GO:0034968InterPro:Hist-Lys_N-MeTrfase_plantInterPro:IPR001214InterPro:IPR003105
InterPro:IPR003616InterPro:IPR007728InterPro:IPR025794InterPro:IPR036987EntrezGene:LOC100262508wikigene:LOC100262508
PFAM:PF00856PFAM:PF02182PFAM:PF05033PFscan:PS50280PFscan:PS50867PFscan:PS50868
PFscan:PS51015PFscan:PS51575PANTHER:PTHR22884PANTHER:PTHR22884:SF415InterPro:PUA-like_sfInterPro:Post-SET_dom
InterPro:Pre-SET_domInterPro:SET_domSMART:SM00317SMART:SM00466SMART:SM00468InterPro:SRA-YDG_sf
InterPro:SRA_YDGSUPFAM:SSF82199SUPFAM:SSF88697TIGR:TC53488UniParc:UPI00015CC239ArrayExpress:VIT_13s0047g00120
EnsemblPlantsGene:VIT_13s0047g00120EnsemblPlants:VIT_13s0047g00120.t01unigene:Vvi.281RefSeq:XP_002273935RefSeq:XP_002273935.1RefSeq:XP_010659032.1
RefSeq:XP_019080090.1SEG:seg::::
Description
No Description!
Coordinates
chr13:-:15523318..15531894
Molecular Weight (calculated)
79691.3 Da
IEP (calculated)
7.494
GRAVY (calculated)
-0.500
Length
716 amino acids
Sequence
(BLAST)
001: MDGGSGHGFV PPSASFDKSR VLDIKPLRSL VPVFPNPPQA PPFVCSPPFG PFPPGFTPFY PFSVAQGPQS SPELNQHKTP TGATNHETPI SASANLFRTP
101: PHFPGVVNGD AETSREYGVQ FLNENSNMGV KQDGFFDDPK RAAPHLRASN SSRKKAKKSK DVDISLTVDN EKGSSKNFVM RFDSLQLDDG NREMVNYVLM
201: TFDALRRRLS QIEEAKESPG GGIKRADLKA ANILMSKGVR TNMRKRIGVT PGVEVGDIFF FRMEMCLAGL HAQSMAGIDY MFVKGGLEEE PVAVSIVSSG
301: GYDDDADDAD VLIYSGQGGN VNRKDKQVAD QKLERGNLAL DRSFHRANEV RVIRGVKDVV NPLSKVYVYD GLYTIQESWT EKGKSGCNMF KYKLVRIPGQ
401: PGAFAHWKSI QKWKEGFSSR IGLILPDLTS GAESIPVSLV NDVDDEKGPA HFTYFPTLRY SKSFNLKHPS FGCNCQNACL PGDLNCSCIR KNGGDFPYTS
501: NGILVARRPL VHECGPTCPC IPNCKNRMSQ TGLKVRLEVF KTNNRGWGLR SWDPIRTGTF ICEYAGEVLD KVKVYQERDE GESNEYLFDT THVYDNAFKW
601: NHEPGLLDEE PSAEPNEYYD IPSPLIISAK YVGNVARFMN HSCSPNVFWQ PVLYEHNNES FLHIAFFAIK HIPPMTELTY DYGMLQSENY EVQSNHTPNG
701: KKKCLCGSSN CRGYYG
Best Arabidopsis Sequence Match ( AT1G73100.1 )
(BLAST)
001: MQGVPGFNTV PNPNHYDKSI VLDIKPLRSL KPVFPNGNQG PPFVGCPPFG PSSSEYSSFF PFGAQQPTHD TPDLNQTQNT PIPSFVPPLR SYRTPTKTNG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
Arabidopsis Description
SUVH3Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.