Factsheet for VIT_14s0068g01090.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P00500_001	Banana	extracellular	37.14	71.43
KRG94709	Soybean	nucleus	38.86	67.77
VIT_01s0150g00070.t01	Wine grape	nucleus	57.14	61.6
Bra006226.1-P	Field mustard	nucleus	65.14	57.19
CDX70530	Canola	nucleus	65.33	56.88
CDX78549	Canola	nucleus	65.14	56.62
Solyc02g094520.2.1	Tomato	nucleus	72.19	55.98
KRH20251	Soybean	nucleus, plastid	68.95	54.68
KRH06819	Soybean	nucleus	74.1	54.03
AT5G13960.1	Thale cress	nucleus	64.0	53.85
Os01t0927000-01	Rice	nucleus	62.67	49.62
Zm00001d042272_P003	Maize	nucleus	61.9	48.36
GSMUA_Achr8P00490_001	Banana	nucleus	33.33	48.34
OQU88147	Sorghum	nucleus	63.24	47.84
TraesCS3D01G433900.1	Wheat	nucleus	61.71	46.96
TraesCS3A01G441200.1	Wheat	nucleus	61.14	46.52
TraesCS3B01G475200.1	Wheat	nucleus	57.52	45.97
HORVU3Hr1G096250.8	Barley	golgi, mitochondrion, nucleus, plastid	61.14	41.91
OQU77925	Sorghum	nucleus	59.81	41.64
VIT_16s0013g00310.t01	Wine grape	nucleus	35.24	40.04
Zm00001d011956_P002	Maize	mitochondrion, nucleus, plastid	53.33	38.46
TraesCS1D01G241500.1	Wheat	nucleus	58.86	37.73
TraesCS1A01G241600.2	Wheat	nucleus	58.86	37.73
VIT_16s0013g00650.t01	Wine grape	nucleus	37.14	33.51
VIT_00s0309g00020.t01	Wine grape	nucleus	39.62	28.69
VIT_08s0056g01660.t01	Wine grape	nucleus	16.95	27.9
VIT_13s0047g00120.t01	Wine grape	nucleus	36.57	26.82
VIT_08s0040g00360.t01	Wine grape	nucleus	36.57	26.05
VIT_05s0049g02220.t01	Wine grape	nucleus	32.76	25.6
VIT_05s0049g01800.t01	Wine grape	nucleus	19.24	18.04
VIT_07s0005g04190.t01	Wine grape	mitochondrion, nucleus	22.29	13.8
VIT_04s0023g00980.t01	Wine grape	nucleus	26.48	9.16

Protein Annotations

KEGG:00310+2.1.1.43	EntrezGene:100265173	wikigene:100265173	MapMan:12.3.3.7	Gene3D:2.30.280.10	ProteinID:CCB46971
ProteinID:CCB46971.1	UniProt:F6H428	EMBL:FN595232	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987
GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259
GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728
InterPro:IPR025794	InterPro:IPR036987	EntrezGene:LOC100265173	wikigene:LOC100265173	PFAM:PF00856	PFAM:PF02182
PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PFscan:PS51575
PANTHER:PTHR22884	PANTHER:PTHR22884:SF467	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom
SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199
SUPFAM:SSF88697	UniParc:UPI000210A967	ArrayExpress:VIT_14s0068g01090	EnsemblPlantsGene:VIT_14s0068g01090	EnsemblPlants:VIT_14s0068g01090.t01	unigene:Vvi.21434
RefSeq:XP_002275754	RefSeq:XP_002275754.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr14:+:24844788..24881775

Molecular Weight (calculated)

58318.6 Da

IEP (calculated)

7.594

GRAVY (calculated)

-0.378

Length

525 amino acids

Sequence
(BLAST)

001: MGLCTRVGAS DLLSLKGDAP EKDGRQGSRR PDLKAISKMM ETNAILYPEK RFGPIPGVDV GHQFFSRAEM VAVGFHSHWL NGIDYMGQSY NRREYSGYTF
101: PLAVAIVLSG QYEDDLDNSE DVVYTGQGGN NLLGNKRQVQ DQVMERGNLA LKNCMEQCVP VRVIRGHKSA NSYVGKVYTY DGLYKVVQYW AEKGVSGFTV
201: FKYRLKRLEG QPILTTNQVQ YARGRVPNSI SEIRGLVCED ISGGQEDIPI PATNLVDDPP FAPTGFTYCN SIKVSKSVKL PSNAIGCNCK GTCTDPRTCS
301: CAMLNGSDFP YVHRDGGRLI EAKDVVFECG PKCGCGPGCL NRTSQRGLKY RLEVFRTPKK GWAVRSWDYI PSGAPICEYK GILMRTDELD NVSDNNYIFD
401: IDCLQTMRGL DGRERRFRDV SMPTSTDDQK SESVPEFCID AGSTGNVARF INHSCEPNLF VQCVLSSHHD AKLARVMLFA ADNIPPLQEL TYDYGYTLDS
501: VMGPDGKIKQ MLCFCGAADC RKRLL

Best Arabidopsis Sequence Match ( AT5G13960.1 )
(BLAST)

001: MAGKRKRANA PDQTERRSSV RVQKVRQKAL DEKARLVQER VKLLSDRKSE ICVDDTELHE KEEENVDGSP KRRSPPKLTA MQKGKQKLSV SLNGKDVNLE
101: PHLKVTKCLR LFNKQYLLCV QAKLSRPDLK GVTEMIKAKA ILYPRKIIGD LPGIDVGHRF FSRAEMCAVG FHNHWLNGID YMSMEYEKEY SNYKLPLAVS
201: IVMSGQYEDD LDNADTVTYT GQGGHNLTGN KRQIKDQLLE RGNLALKHCC EYNVPVRVTR GHNCKSSYTK RVYTYDGLYK VEKFWAQKGV SGFTVYKYRL
301: KRLEGQPELT TDQVNFVAGR IPTSTSEIEG LVCEDISGGL EFKGIPATNR VDDSPVSPTS GFTYIKSLII EPNVIIPKSS TGCNCRGSCT DSKKCACAKL
401: NGGNFPYVDL NDGRLIESRD VVFECGPHCG CGPKCVNRTS QKRLRFNLEV FRSAKKGWAV RSWEYIPAGS PVCEYIGVVR RTADVDTISD NEYIFEIDCQ
501: QTMQGLGGRQ RRLRDVAVPM NNGVSQSSED ENAPEFCIDA GSTGNFARFI NHSCEPNLFV QCVLSSHQDI RLARVVLFAA DNISPMQELT YDYGYALDSV
601: HGPDGKVKQL ACYCGALNCR KRLY

Arabidopsis Description

SUVH4Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZB6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.