Factsheet for VIT_16s0013g00310.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0013g00650.t01	Wine grape	nucleus	86.15	68.38
Bra005362.1-P	Field mustard	nucleus	48.7	55.01
PGSC0003DMT400054167	Potato	nucleus	51.3	49.17
PGSC0003DMT400092528	Potato	cytosol	22.51	48.6
TraesCS3A01G520700.1	Wheat	nucleus	29.87	47.92
Solyc03g093740.1.1	Tomato	nucleus	30.74	46.25
Solyc03g093720.1.1	Tomato	nucleus	28.14	43.33
VIT_00s0309g00020.t01	Wine grape	nucleus	62.34	39.72
KRG90121	Soybean	nucleus	46.97	39.31
PGSC0003DMT400080404	Potato	nucleus, plastid	50.87	38.46
PGSC0003DMT400080391	Potato	nucleus	36.58	37.64
VIT_01s0150g00070.t01	Wine grape	nucleus	37.45	35.52
VIT_14s0068g01090.t01	Wine grape	nucleus	40.04	35.24
CDY31670	Canola	nucleus	53.46	34.45
CDX84255	Canola	nucleus	53.03	33.98
CDY25627	Canola	nucleus	52.81	32.71
CDX89510	Canola	nucleus	53.03	32.32
TraesCS3B01G590300.1	Wheat	nucleus	42.86	31.53
Solyc03g093760.1.1	Tomato	nucleus	54.33	31.49
AT2G35160.3	Thale cress	nucleus	53.68	31.23
Solyc03g093770.1.1	Tomato	golgi, plasma membrane	26.84	30.62
AT2G22740.1	Thale cress	nucleus	52.16	30.51
Bra030212.1-P	Field mustard	nucleus	51.3	29.92
Solyc03g093710.1.1	Tomato	nucleus	53.9	29.71
PGSC0003DMT400054154	Potato	nucleus	53.68	29.25
Solyc03g093700.1.1	Tomato	nucleus	51.95	28.61
PGSC0003DMT400054163	Potato	extracellular, nucleus	51.08	28.1
PGSC0003DMT400080398	Potato	nucleus	52.6	27.61
VIT_08s0056g01660.t01	Wine grape	nucleus	17.97	26.02
VIT_13s0047g00120.t01	Wine grape	nucleus	39.83	25.7
Os04t0544100-01	Rice	nucleus	46.32	25.45
VIT_08s0040g00360.t01	Wine grape	nucleus	40.04	25.1
EES05802	Sorghum	nucleus	41.99	24.65
VIT_05s0049g02220.t01	Wine grape	nucleus	35.06	24.11
EES12588	Sorghum	nucleus	43.94	22.78
TraesCS2B01G409600.1	Wheat	nucleus	46.97	22.56
TraesCS2D01G389100.1	Wheat	nucleus	46.54	22.4
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	46.54	21.33
VIT_05s0049g01800.t01	Wine grape	nucleus	21.64	17.86
VIT_07s0005g04190.t01	Wine grape	mitochondrion, nucleus	23.16	12.62
VIT_04s0023g00980.t01	Wine grape	nucleus	25.97	7.91

Protein Annotations

KEGG:00310+2.1.1.43	EntrezGene:100259566	wikigene:100259566	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10
ProteinID:CCB61172	ProteinID:CCB61172.1	UniProt:F6I2K5	EMBL:FN596738	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270
GO:GO:0009987	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538
GO:GO:0032259	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616
InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	EntrezGene:LOC100259566	wikigene:LOC100259566	PFAM:PF00856
PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015
PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF476	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom
InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG
SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI000210919A	ArrayExpress:VIT_16s0013g00310	EnsemblPlantsGene:VIT_16s0013g00310	EnsemblPlants:VIT_16s0013g00310.t01
RefSeq:XP_002277774	RefSeq:XP_002277774.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr16:+:5345035..5346426

Molecular Weight (calculated)

52573.9 Da

IEP (calculated)

9.156

GRAVY (calculated)

-0.571

Length

462 amino acids

Sequence
(BLAST)

001: MTLKRQQKWV NTTKRLGHVS GIEVGDTFHY RVELAIIGLH SHFQNGIDYM EKDGKVLAIS VVDSGRYAND KESSDVLIYL GQGGNPMVGY NKQPEDQKLE
101: RGNLALKNSM DAKTPVRVTR GFQAMKVTSN GYTYDGLYFV DKYWQERGQF GKLVFKFQLK RITGEPKFDQ RELNQSKDSE VRWKTIFNDI SLGRKLKKSK
201: KSKVCRKNIL NDISLGKEER SIHVVNTIDY EKPQPFTYIA RMAYLEGSKW SIPSGCDCTD GCSDSVKCAC VLKNGGEIPF NCHGAIIETK PWVYECGPLC
301: KCPPSCNNRV SQNGIRFSLE VFKTKSTGWG VRSRNYISSG SFICEYAGEL IQDKEAKRRT ANDEYLFDLD NGAFAIDAAK FGNVGRYINH SCSPNLYAQK
401: VLYDHDDKRL PHIMLFATKN IPPMRELTYH YNYMVGQVLD INGQIKTKRC YCGSQECKGR MC

Best Arabidopsis Sequence Match ( AT2G35160.4 )
(BLAST)

001: MVHSESSILS SLRGGDGGGI PCSKDELAIN GSYTDPMGRR KSKRFKVAAE SEFSPDFGSI TRQLRSRRMQ KEFTVETYET RNVSDVCVLS SQADVELIPG
101: EIVAERDSFK SVDCNDMSVG LTEGAESLGV NMQEPMKDRN MPENTSEQNM VEVHPPSISL PEEDMMGSVC RKSITGTKEL HGRTISVGRD LSPNMGSKFS
201: KNGKTAKRSI SVEEENLVLE KSDSGDHLGP SPEVLELEKS EVWIITDKGV VMPSPVKPSE KRNGDYGEGS MRKNSERVAL DKKRLASKFR LSNGGLPSCS
301: SSGDSARYKV KETMRLFHET CKKIMQEEEA RPRKRDGGNF KVVCEASKIL KSKGKNLYSG TQIIGTVPGV EVGDEFQYRM ELNLLGIHRP SQSGIDYMKD
401: DGGELVATSI VSSGGYNDVL DNSDVLIYTG QGGNVGKKKN NEPPKDQQLV TGNLALKNSI NKKNPVRVIR GIKNTTLQSS VVAKNYVYDG LYLVEEYWEE
501: TGSHGKLVFK FKLRRIPGQP ELPWKEVAKS KKSEFRDGLC NVDITEGKET LPICAVNNLD DEKPPPFIYT AKMIYPDWCR PIPPKSCGCT NGCSKSKNCA
601: CIVKNGGKIP YYDGAIVEIK PLVYECGPHC KCPPSCNMRV SQHGIKIKLE IFKTESRGWG VRSLESIPIG SFICEYAGEL LEDKQAESLT GKDEYLFDLG
701: DEDDPFTINA AQKGNIGRFI NHSCSPNLYA QDVLYDHEEI RIPHIMFFAL DNIPPLQELS YDYNYKIDQV YDSNGNIKKK FCYCGSAECS GRLY

Arabidopsis Description

SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.