Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66640 | Canola | cytosol | 49.37 | 51.31 |
| Bra026639.1-P | Field mustard | cytosol | 50.0 | 50.8 |
| CDY09423 | Canola | cytosol | 50.0 | 50.8 |
| PGSC0003DMT400024179 | Potato | cytosol | 54.09 | 46.11 |
| Solyc04g076270.1.1 | Tomato | nucleus | 53.77 | 45.97 |
| AT2G01710.2 | Thale cress | mitochondrion | 50.0 | 44.79 |
| KRG89389 | Soybean | extracellular | 19.5 | 41.33 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 47.17 | 30.86 |
Protein Annotations
| Gene3D:1.10.287.110 | EntrezGene:100260770 | wikigene:100260770 | MapMan:12.5.1.16.2 | ProteinID:CCB45650 | ProteinID:CCB45650.1 |
| InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | UniProt:F6H128 | EMBL:FN595227 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf |
| EntrezGene:LOC100260770 | wikigene:LOC100260770 | PFAM:PF00226 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 |
| PANTHER:PTHR45496 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI000198532C | ArrayExpress:VIT_18s0001g07450 | EnsemblPlantsGene:VIT_18s0001g07450 |
| EnsemblPlants:VIT_18s0001g07450.t01 | RefSeq:XP_002283863 | RefSeq:XP_002283863.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr18:-:5687109..5688423
Molecular Weight (calculated)
34754.5 Da
IEP (calculated)
8.702
GRAVY (calculated)
-0.361
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEGSNNRAE AERLLGVAEK LLHTRDFNGS KDFAILAQET EPLLDGTDQI LAVADVLIAS EKRINNHHDW YAILQTDRRS DDLDLIKKQY RRLALLLHPD
101: KNKFVFADHA FKLVADAWAV LSDPAKKSLY DNELSLFSKV DLAALKGDRL PVRRSLRKNN NGSKKPKGME EPSSGSSDDQ RPLRLTSFWT ACPYCYILYE
201: YPRVYEGCCL RCQNCQRAFH AALVPSLPPL VPGKEAYYCC WGFFPLGFAI SGAEGGKGKG AGGFPNWMPP MFGGGVAAEG GGGSAGGVGV VEVSDGSASA
301: GLVKPKRRGR PPKKAVHV
101: KNKFVFADHA FKLVADAWAV LSDPAKKSLY DNELSLFSKV DLAALKGDRL PVRRSLRKNN NGSKKPKGME EPSSGSSDDQ RPLRLTSFWT ACPYCYILYE
201: YPRVYEGCCL RCQNCQRAFH AALVPSLPPL VPGKEAYYCC WGFFPLGFAI SGAEGGKGKG AGGFPNWMPP MFGGGVAAEG GGGSAGGVGV VEVSDGSASA
301: GLVKPKRRGR PPKKAVHV
001: MLLFFFPRPF LHTANQSLVS SSLVEAIIFR SAHHFSAIAD GRRKMGDNNP NRSEAERLLG IAEKLLESRD LNGSKEFAIL AQETEPLLEG TDQILAVVDV
101: LLSSAPENRI KNQPNWYKIL QIEDLTESST DNDLIKKQYR RLALLLHPDK NRFPFADQAF RFVLDAWEVL STPTKKSQFD GDLNLIFTKV NLNTQKSKKK
201: TTTNEKMSTF WTACPYCYSL HEYPRVYQEY CIRCQNCQRA FHAASIPQLP PLIPGKDEYY CCWGFFPMGF VGGKGGEAAI ANGVDAAKFP NWMPPVFSSG
301: GVAAPPSGNG VSFDGWSGGA AKRDNEAVRS NNGVGVNSDG TPKKRGRGRP KKNPV
101: LLSSAPENRI KNQPNWYKIL QIEDLTESST DNDLIKKQYR RLALLLHPDK NRFPFADQAF RFVLDAWEVL STPTKKSQFD GDLNLIFTKV NLNTQKSKKK
201: TTTNEKMSTF WTACPYCYSL HEYPRVYQEY CIRCQNCQRA FHAASIPQLP PLIPGKDEYY CCWGFFPMGF VGGKGGEAAI ANGVDAAKFP NWMPPVFSSG
301: GVAAPPSGNG VSFDGWSGGA AKRDNEAVRS NNGVGVNSDG TPKKRGRGRP KKNPV
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.