Factsheet for Zm00001d002938_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13161	Sorghum	nucleus	85.09	76.78
TraesCSU01G137800.1	Wheat	nucleus	29.25	49.88
HORVU2Hr1G127700.1	Barley	nucleus	42.05	42.29
KRG97025	Soybean	nucleus	16.32	40.85
TraesCS2D01G566400.1	Wheat	nucleus	42.05	40.57
TraesCS2B01G616200.1	Wheat	nucleus	40.79	39.35
Zm00001d031851_P002	Maize	nucleus	41.07	39.19
Zm00001d049884_P006	Maize	nucleus	40.79	39.03
HORVU2Hr1G127770.1	Barley	nucleus	37.55	37.77
GSMUA_Achr1P20340_001	Banana	nucleus	35.3	35.35
CDX92067	Canola	nucleus	22.78	34.32
VIT_05s0049g01800.t01	Wine grape	nucleus	27.0	34.29
Zm00001d051126_P004	Maize	nucleus	24.19	33.92
KRH34133	Soybean	nucleus	32.07	33.24
PGSC0003DMT400051920	Potato	nucleus	23.63	33.01
AT3G04380.1	Thale cress	nucleus	22.64	32.72
KRH68776	Soybean	nucleus	30.94	32.5
KRG92731	Soybean	nucleus	32.07	31.98
Solyc09g072890.1.1	Tomato	nucleus	35.3	30.42
CDY49341	Canola	nucleus	23.49	29.98
KRG95723	Soybean	nucleus	30.24	29.7
Bra036004.1-P	Field mustard	nucleus	25.74	29.28
Solyc06g083760.2.1	Tomato	nucleus	34.88	28.8
CDY14903	Canola	nucleus	25.74	28.59
VIT_07s0005g04190.t01	Wine grape	mitochondrion, nucleus	33.76	28.3
KRH32246	Soybean	nucleus	32.49	28.14
KRH19618	Soybean	nucleus	32.21	27.86
PGSC0003DMT400044180	Potato	nucleus	28.69	26.46
Solyc09g090630.1.1	Tomato	nucleus	29.4	26.32
AT5G43990.9	Thale cress	nucleus	27.14	26.08
CDX94744	Canola	nucleus	25.04	25.99
CDY22319	Canola	nucleus	25.32	25.53
AT1G04050.1	Thale cress	nucleus	25.04	24.25
Bra033710.1-P	Field mustard	nucleus	25.18	23.87
CDX96935	Canola	nucleus	26.16	23.72
Bra001104.1-P	Field mustard	nucleus	23.77	22.35
Zm00001d006369_P002	Maize	nucleus	10.55	22.12
CDY42922	Canola	plasma membrane, vacuole	23.21	19.93
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	23.63	17.83
Zm00001d042272_P003	Maize	nucleus	12.94	13.69
Zm00001d005445_P001	Maize	nucleus	10.69	13.31
Zm00001d031858_P001	Maize	nucleus	12.1	13.19
Zm00001d010646_P001	Maize	plastid	11.96	13.04
Zm00001d038541_P002	Maize	nucleus	12.1	12.43
Zm00001d041005_P001	Maize	nucleus	12.1	12.3
Zm00001d019520_P001	Maize	nucleus	10.55	11.42
Zm00001d011956_P002	Maize	mitochondrion, nucleus, plastid	11.25	10.99
Zm00001d043135_P003	Maize	nucleus	11.81	10.78
Zm00001d019195_P001	Maize	nucleus	12.94	10.75
Zm00001d032343_P001	Maize	plastid	13.36	8.59
Zm00001d005650_P001	Maize	plastid	14.21	7.76
Zm00001d017798_P002	Maize	nucleus	14.06	6.7
Zm00001d051590_P001	Maize	nucleus	12.66	5.98
Zm00001d044165_P001	Maize	nucleus	1.69	3.95
Zm00001d050267_P001	Maize	peroxisome	2.81	3.37
CDX92068	Canola	mitochondrion	0.0	0.0
CDY42923	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	Gene3D:1.10.8.850	MapMan:12.3.3.7	Gene3D:2.170.270.10	UniProt:A0A1D6E5H7	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270
GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259
GO:GO:0034968	InterPro:IPR001214	InterPro:IPR007728	ProteinID:ONM15727.1	PFAM:PF00856	PFAM:PF05033
PFAM:PF10440	PFscan:PS50280	PFscan:PS50867	PANTHER:PTHR22884	PANTHER:PTHR22884:SF409	InterPro:Pre-SET_dom
InterPro:SET_dom	SMART:SM00468	SUPFAM:SSF82199	UniParc:UPI00022192D3	InterPro:WIYLD_domain	EnsemblPlantsGene:Zm00001d002938
EnsemblPlants:Zm00001d002938_P001	EnsemblPlants:Zm00001d002938_T001	SEG:seg	:	:	:

Description

set domain gene107Histone-lysine N-methyltransferase SUVR4

Coordinates

chr2:-:27443632..27447830

Molecular Weight (calculated)

77936.4 Da

IEP (calculated)

6.561

GRAVY (calculated)

-0.430

Length

711 amino acids

Sequence
(BLAST)

001: MDSLSRRERA HRAVDAMKPL GFSKKEVFAV LKNLLQLFDN SWEPIEDECY RALADAILEA RDRPQMHCSN STRGVRLPPE GEGCRPRPST SRDIHDGLDG
101: GTEALRIKRT RISASCSIDP QSPVSAAEAL DEPIGVSSEL SHPQMGTSTQ CQRPTAYGGV PSHGNTAHKK RAIQMMDEDF QHTVFLREPK PEPDTDDLQC
201: SAPASSCQNA QLGRIASHPL NASTLDALPV QAPLKISGAN GRTVQHYRST APSSFVEPIN SKTKQPQSLE NGLDHATMMH NAGTGSAAGK TQEAPCLHTL
301: VASSTMGEVE MSIKCCIDPS KFHMPDLEAV FKMVEEKCLR SHKSLPPDFS IAGLIKQICQ CVARLGSDHA AEHNKQSDAF GKIRSSQDKP TTSSAPSLEP
401: IDCMNSRSGE YKAVEESLIV EASENGPPNS TTHQQAHLVL PPNGCTHDLS DISKGKERLS ISAVNEFGSE NCLPSFYYIP RNLVSQDSYV NSVETIGDKD
501: CCSDCSGNCL YASEPCACAR KTGGEFAYTR DGLVRTKFLD ECISMNRFPE KHNMFFCKSC PLESIRNEPS PELCRGHIIR NFIKECGSKC GCNAQCGNRV
601: VQRGITCNLQ VFSTREGKGW GLRTLDELPK GAFVCEYVGE LLTNTKLHEM TTQNMHNARY SVLLDAGWGP DGVLKDEEAL FLDATFCGNV GRFINHRCCL
701: LILNLLIVML F

Best Arabidopsis Sequence Match ( AT3G04380.1 )
(BLAST)

001: MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGNRGKNLKV
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK

Arabidopsis Description

SUVR4Histone-lysine N-methyltransferase SUVR4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W595]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.