Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d035355_P001 | Maize | cytosol | 7.97 | 40.87 |
| Zm00001d024396_P001 | Maize | plastid | 39.68 | 39.42 |
| Zm00001d014876_P005 | Maize | cytosol | 31.14 | 30.94 |
| Zm00001d021492_P002 | Maize | cytosol | 28.24 | 27.84 |
| Zm00001d021491_P001 | Maize | cytosol, plasma membrane | 26.92 | 25.79 |
| Zm00001d035129_P001 | Maize | plasma membrane | 23.17 | 23.39 |
| Zm00001d035125_P001 | Maize | cytosol, mitochondrion, plasma membrane | 27.49 | 23.16 |
| Zm00001d032724_P001 | Maize | cytosol, endoplasmic reticulum, mitochondrion, plastid | 29.36 | 20.96 |
Protein Annotations
| EntrezGene:103647804 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A1D6F078 | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt_typical-subtyp | InterPro:NB-ARC | ProteinID:ONM24926.1 | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 |
| PANTHER:PTHR23155 | PANTHER:PTHR23155:SF872 | SMART:SM00369 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI00022179E3 |
| EnsemblPlantsGene:Zm00001d006755 | EnsemblPlants:Zm00001d006755_P001 | EnsemblPlants:Zm00001d006755_T001 | SEG:seg | : | : |
Description
Disease resistance RPP13-like protein 4
Coordinates
chr2:-:215971156..215975172
Molecular Weight (calculated)
119658.0 Da
IEP (calculated)
6.605
GRAVY (calculated)
-0.161
Length
1066 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAMILDAFVP MLGRMVAGAV KERLDTLLGV PGEMERLEST LEDLVNVLGD AEMKRITDTA VDAWVRELKD VMYDADDVLD RWQMEAQARS SSDAPKRSFP
0101: GAGCCAPLLT CFRDPALAHA MAAQIKELNR RLESVCRRSS MFRFVSASSS VPLRQQLPPA SSGNGKTSSV IVHADLIGEK IEEDGNRLVE ALIADDLREN
0201: VLAVGITGAG GIGKTTLAKR VFADQRVRDE FDLRVWVCVS QDVNEADLLW SVLVGAGGGH QLQQQHDATP DRSSLEPALQ RAVSGKKVLL VLDDVWSDVA
0301: WKEVLQNAFR AGARGGSRVL VTTRKETVAR QMKAVHIHRV EKLQPEDGWR LLKNQVVLGR NPTDIENFKD IGMEIVTRCD CLPLAIKTVG GLLCTKERTF
0401: RDWEEVSRSA AWSVAGLPEE VHNAIYLSYA DLPPHLKQCF LHCSLFPKDE VIKRVDVVQM WIAEGFVQED GSSALLEDVG NMYYRELVMR NLLEPDGQYY
0501: DQSGCTMHDL LRSFANYLAK DEALLLTQGQ SLCDMKTKAK LRRLSVATEN VLQSTFRNQK QLRALMILRS TTVQLEEFLH DLPKLRLLHL GGVNLTTLPP
0601: SLCDLKHLRY LELSGTMIDA IPDSIGDLRY LQYIGLLNCI NLFSLPGSIV RLHRLRALHI KGASVNDIPR GIGRLQNLVE LTGFLTQNDA AAGWNSLEEL
0701: GHLPQLSLLY LSNLEKAHTG SVAKKADLQG KRHLRYLSLE CTPRAAGGNQ IKDNNTQQEK RQIEDVFDEL CPPVCLENLS LIGFFGHKLP KWMSSGEMDL
0801: KYLRSIKLED CTYCEQLPAL GHLLSLDFLL IKHAPSIMRI GHEFFCSSNA TQIDPRMLFP RLEKLGFDRL DGWEEWIWDK ELEQAMPNIF SLKVTKCKLK
0901: YFPTGLVHQT RTLRELIISE ACNLTSVANF LLLSDLHLHA NPNLEMIANL PKLRRLSVIQ CPKLNALVGL TELQSITLQD YAAELFPQYL EETSAAKLEV
1001: FCNEELFKLI TLQEGSEWCK IKNIQNVKAY APKGGDRKGW YALYTKEPFS LTTNNKGCEI FEVAKS
0101: GAGCCAPLLT CFRDPALAHA MAAQIKELNR RLESVCRRSS MFRFVSASSS VPLRQQLPPA SSGNGKTSSV IVHADLIGEK IEEDGNRLVE ALIADDLREN
0201: VLAVGITGAG GIGKTTLAKR VFADQRVRDE FDLRVWVCVS QDVNEADLLW SVLVGAGGGH QLQQQHDATP DRSSLEPALQ RAVSGKKVLL VLDDVWSDVA
0301: WKEVLQNAFR AGARGGSRVL VTTRKETVAR QMKAVHIHRV EKLQPEDGWR LLKNQVVLGR NPTDIENFKD IGMEIVTRCD CLPLAIKTVG GLLCTKERTF
0401: RDWEEVSRSA AWSVAGLPEE VHNAIYLSYA DLPPHLKQCF LHCSLFPKDE VIKRVDVVQM WIAEGFVQED GSSALLEDVG NMYYRELVMR NLLEPDGQYY
0501: DQSGCTMHDL LRSFANYLAK DEALLLTQGQ SLCDMKTKAK LRRLSVATEN VLQSTFRNQK QLRALMILRS TTVQLEEFLH DLPKLRLLHL GGVNLTTLPP
0601: SLCDLKHLRY LELSGTMIDA IPDSIGDLRY LQYIGLLNCI NLFSLPGSIV RLHRLRALHI KGASVNDIPR GIGRLQNLVE LTGFLTQNDA AAGWNSLEEL
0701: GHLPQLSLLY LSNLEKAHTG SVAKKADLQG KRHLRYLSLE CTPRAAGGNQ IKDNNTQQEK RQIEDVFDEL CPPVCLENLS LIGFFGHKLP KWMSSGEMDL
0801: KYLRSIKLED CTYCEQLPAL GHLLSLDFLL IKHAPSIMRI GHEFFCSSNA TQIDPRMLFP RLEKLGFDRL DGWEEWIWDK ELEQAMPNIF SLKVTKCKLK
0901: YFPTGLVHQT RTLRELIISE ACNLTSVANF LLLSDLHLHA NPNLEMIANL PKLRRLSVIQ CPKLNALVGL TELQSITLQD YAAELFPQYL EETSAAKLEV
1001: FCNEELFKLI TLQEGSEWCK IKNIQNVKAY APKGGDRKGW YALYTKEPFS LTTNNKGCEI FEVAKS
0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD
Arabidopsis Description
RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.