Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038541_P002 | Maize | nucleus | 92.18 | 86.85 |
| Os05t0490700-01 | Rice | extracellular | 83.74 | 81.25 |
| TraesCS1B01G378900.1 | Wheat | nucleus | 82.21 | 79.53 |
| TraesCS1D01G366800.1 | Wheat | nucleus | 82.36 | 79.44 |
| TraesCS1A01G362000.1 | Wheat | nucleus | 82.21 | 79.29 |
| HORVU1Hr1G068460.1 | Barley | nucleus | 80.21 | 77.6 |
| TraesCS1B01G319000.1 | Wheat | nucleus | 79.91 | 77.3 |
| TraesCS1D01G307700.1 | Wheat | nucleus | 79.45 | 76.85 |
| TraesCS1A01G308300.1 | Wheat | nucleus | 78.99 | 76.41 |
| HORVU0Hr1G001190.1 | Barley | nucleus | 80.37 | 73.39 |
| Zm00001d043135_P003 | Maize | nucleus | 69.94 | 58.54 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 6.75 | 57.89 |
| Bra009408.1-P | Field mustard | nucleus | 38.65 | 49.22 |
| KRH56252 | Soybean | nucleus | 15.49 | 47.42 |
| Zm00001d041005_P001 | Maize | nucleus | 48.47 | 45.21 |
| Bra028776.1-P | Field mustard | nucleus | 42.64 | 43.78 |
| Bra005829.1-P | Field mustard | nucleus | 41.87 | 42.33 |
| CDY11319 | Canola | nucleus | 41.87 | 42.33 |
| CDX80930 | Canola | nucleus | 41.41 | 41.93 |
| Solyc09g082050.2.1 | Tomato | nucleus | 41.41 | 41.73 |
| CDX98805 | Canola | nucleus | 41.72 | 41.53 |
| AT1G73100.1 | Thale cress | nucleus | 42.48 | 41.41 |
| CDY11129 | Canola | nucleus | 42.33 | 41.26 |
| KRH66648 | Soybean | nucleus | 44.79 | 41.24 |
| VIT_13s0047g00120.t01 | Wine grape | nucleus | 45.25 | 41.2 |
| KRH13229 | Soybean | nucleus | 42.48 | 41.16 |
| KRH20576 | Soybean | nucleus | 42.48 | 41.16 |
| CDX68245 | Canola | nucleus | 42.02 | 41.14 |
| CDY61331 | Canola | nucleus | 42.18 | 41.11 |
| AT2G05900.1 | Thale cress | cytoskeleton, cytosol, nucleus | 19.63 | 41.03 |
| KRH62706 | Soybean | nucleus | 41.87 | 40.93 |
| AT5G04940.2 | Thale cress | nucleus | 41.87 | 40.75 |
| PGSC0003DMT400077329 | Potato | nucleus | 41.87 | 40.69 |
| Zm00001d019195_P001 | Maize | nucleus | 53.37 | 40.65 |
| Bra009409.1-P | Field mustard | nucleus | 41.41 | 40.6 |
| CDY59935 | Canola | nucleus | 40.95 | 40.52 |
| CDX96449 | Canola | nucleus | 40.8 | 40.49 |
| Bra016018.1-P | Field mustard | nucleus | 41.26 | 39.73 |
| CDX98804 | Canola | nucleus | 36.5 | 38.83 |
| Solyc10g077070.1.1 | Tomato | nucleus | 42.48 | 38.8 |
| PGSC0003DMT400018512 | Potato | nucleus | 42.33 | 38.44 |
| VIT_08s0040g00360.t01 | Wine grape | nucleus | 43.1 | 38.13 |
| CDY14135 | Canola | nucleus | 42.18 | 38.09 |
| KRG95012 | Soybean | plastid | 27.3 | 36.48 |
| AT1G17770.1 | Thale cress | nucleus | 37.42 | 35.21 |
| CDY66122 | Canola | nucleus | 35.89 | 32.77 |
| CDY26218 | Canola | nucleus | 34.82 | 32.52 |
| AT2G24740.1 | Thale cress | nucleus | 35.89 | 30.99 |
| CDY56214 | Canola | nucleus | 36.2 | 29.76 |
| Zm00001d031858_P001 | Maize | nucleus | 28.68 | 28.68 |
| Zm00001d006369_P002 | Maize | nucleus | 14.11 | 27.14 |
| CDX70182 | Canola | nucleus | 41.41 | 26.68 |
| Zm00001d042272_P003 | Maize | nucleus | 27.3 | 26.49 |
| Bra004258.1-P | Field mustard | nucleus | 36.04 | 25.57 |
| Bra025949.1-P | Field mustard | nucleus | 34.82 | 25.42 |
| CDY26221 | Canola | nucleus | 34.82 | 25.36 |
| Zm00001d005445_P001 | Maize | nucleus | 21.32 | 24.34 |
| Zm00001d011956_P002 | Maize | mitochondrion, nucleus, plastid | 25.31 | 22.66 |
| Zm00001d019520_P001 | Maize | nucleus | 21.17 | 21.0 |
| Zm00001d051126_P004 | Maize | nucleus | 13.8 | 17.75 |
| Zm00001d032343_P001 | Maize | plastid | 29.29 | 17.27 |
| Zm00001d005650_P001 | Maize | plastid | 32.82 | 16.45 |
| Zm00001d049884_P006 | Maize | nucleus | 17.33 | 15.21 |
| Zm00001d050267_P001 | Maize | peroxisome | 13.65 | 15.01 |
| Zm00001d031851_P002 | Maize | nucleus | 16.72 | 14.63 |
| CDY01852 | Canola | plasma membrane | 36.81 | 12.93 |
| Zm00001d002938_P001 | Maize | nucleus | 13.04 | 11.96 |
| Zm00001d017798_P002 | Maize | nucleus | 15.64 | 6.83 |
| Zm00001d051590_P001 | Maize | nucleus | 11.81 | 5.11 |
| Zm00001d044165_P001 | Maize | nucleus | 0.92 | 1.97 |
| CDX86631 | Canola | cytosol | 0.0 | 0.0 |
| CDX89821 | Canola | cytosol | 0.0 | 0.0 |
| CDY21127 | Canola | cytosol | 0.0 | 0.0 |
| CDY53193 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.7 | MapMan:12.5.1.16.1 | Gene3D:2.170.270.10 | Gene3D:2.30.280.10 | UniProt:A0A1D6FSK8 |
| ProteinID:AQK94545.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016571 |
| GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | GO:GO:0032259 | GO:GO:0034968 | InterPro:Hist-Lys_N-MeTrfase_plant |
| InterPro:IPR001214 | InterPro:IPR003105 | InterPro:IPR003616 | InterPro:IPR007728 | InterPro:IPR025794 | InterPro:IPR036987 |
| PFAM:PF00856 | PFAM:PF02182 | PFAM:PF05033 | PFscan:PS50280 | PFscan:PS50867 | PFscan:PS50868 |
| PFscan:PS51015 | PFscan:PS51575 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF372 | InterPro:PUA-like_sf | InterPro:Post-SET_dom |
| InterPro:Pre-SET_dom | InterPro:SET_dom | SMART:SM00317 | SMART:SM00466 | SMART:SM00468 | InterPro:SRA-YDG_sf |
| InterPro:SRA_YDG | SUPFAM:SSF82199 | SUPFAM:SSF88697 | UniParc:UPI0008431A4E | EnsemblPlantsGene:Zm00001d010646 | EnsemblPlants:Zm00001d010646_P001 |
| EnsemblPlants:Zm00001d010646_T001 | SEG:seg | : | : | : | : |
Description
set domain gene105Putative histone-lysine N-methyltransferase family protein
Coordinates
chr8:-:122873951..122875909
Molecular Weight (calculated)
72071.2 Da
IEP (calculated)
7.645
GRAVY (calculated)
-0.484
Length
652 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPAPMGVNV NQSSTPPLVC VTPVGQFPIG FGAGNLPAFG SFTTFSATTN GVSYTGTSGN GAIDATPISA YKTRSSISLD DDDDEPYSGN QGLASERKAR
101: RGRPPGSGRD GSNGKLKRPK PTYKNFVAGK ELVFLSSTSD PREFVESVHM TFEALRRRHL QMDETQDASR RADLKAGAIM MASNIRANSG KRVGTVPGVE
201: IGDIFYFRME LCVIGLHAPS MGGIDYMTTK FGKDEDSVAI CIVSAGGYEN EDDDTDVLVY SGQGGNNRNT EERHDQKLER GNLALERSLH RKNEIRVVRG
301: FKDPFCLTGK IYIYDGLYKI HESWKERTKY GVNCFKYKLL REPGQRDGAA LWKMTQRWID NPATRGRVLL ADLSSKAEIL PVCLVNEVDH EKGPVHFTYT
401: NQVKYLRPLS SMKKLQGCGC QSVCLPGDAS CACGQHNGGD LPFSSSGLLS CRKPIVYECG ESCNCSTNCR NRVTQKGSRL HFEVFRTTNR GWGLRCWEPI
501: RAGSFICEYA GEVIDELKFN LNDSEDDYIF QTVCPGEKTL KWNYGPELIG EVSTYVSPDE FEPLPVKISA KNMGNVSRFM NHSCSPNVFW QPVQYDHGDD
601: GHPHIMFFAL KHIPPMTELT YDYGVAGAES SGSGSRRTKN CVCGSQNCRG LF
101: RGRPPGSGRD GSNGKLKRPK PTYKNFVAGK ELVFLSSTSD PREFVESVHM TFEALRRRHL QMDETQDASR RADLKAGAIM MASNIRANSG KRVGTVPGVE
201: IGDIFYFRME LCVIGLHAPS MGGIDYMTTK FGKDEDSVAI CIVSAGGYEN EDDDTDVLVY SGQGGNNRNT EERHDQKLER GNLALERSLH RKNEIRVVRG
301: FKDPFCLTGK IYIYDGLYKI HESWKERTKY GVNCFKYKLL REPGQRDGAA LWKMTQRWID NPATRGRVLL ADLSSKAEIL PVCLVNEVDH EKGPVHFTYT
401: NQVKYLRPLS SMKKLQGCGC QSVCLPGDAS CACGQHNGGD LPFSSSGLLS CRKPIVYECG ESCNCSTNCR NRVTQKGSRL HFEVFRTTNR GWGLRCWEPI
501: RAGSFICEYA GEVIDELKFN LNDSEDDYIF QTVCPGEKTL KWNYGPELIG EVSTYVSPDE FEPLPVKISA KNMGNVSRFM NHSCSPNVFW QPVQYDHGDD
601: GHPHIMFFAL KHIPPMTELT YDYGVAGAES SGSGSRRTKN CVCGSQNCRG LF
001: MERNGGHYTD KTRVLDIKPL RTLRPVFPSG NQAPPFVCAP PFGPFPPGFS SFYPFSSSQA NQHTPDLNQA QYPPQHQQPQ NPPPVYQQQP PQHASEPSLV
101: TPLRSFRSPD VSNGNAELEG STVKRRIPKK RPISRPENMN FESGINVADR ENGNRELVLS VLMRFDALRR RFAQLEDAKE AVSGIIKRPD LKSGSTCMGR
201: GVRTNTKKRP GIVPGVEIGD VFFFRFEMCL VGLHSPSMAG IDYLVVKGET EEEPIATSIV SSGYYDNDEG NPDVLIYTGQ GGNADKDKQS SDQKLERGNL
301: ALEKSLRRDS AVRVIRGLKE ASHNAKIYIY DGLYEIKESW VEKGKSGHNT FKYKLVRAPG QPPAFASWTA IQKWKTGVPS RQGLILPDMT SGVESIPVSL
401: VNEVDTDNGP AYFTYSTTVK YSESFKLMQP SFGCDCANLC KPGNLDCHCI RKNGGDFPYT GNGILVSRKP MIYECSPSCP CSTCKNKVTQ MGVKVRLEVF
501: KTANRGWGLR SWDAIRAGSF ICIYVGEAKD KSKVQQTMAN DDYTFDTTNV YNPFKWNYEP GLADEDACEE MSEESEIPLP LIISAKNVGN VARFMNHSCS
601: PNVFWQPVSY ENNSQLFVHV AFFAISHIPP MTELTYDYGV SRPSGTQNGN PLYGKRKCFC GSAYCRGSFG
101: TPLRSFRSPD VSNGNAELEG STVKRRIPKK RPISRPENMN FESGINVADR ENGNRELVLS VLMRFDALRR RFAQLEDAKE AVSGIIKRPD LKSGSTCMGR
201: GVRTNTKKRP GIVPGVEIGD VFFFRFEMCL VGLHSPSMAG IDYLVVKGET EEEPIATSIV SSGYYDNDEG NPDVLIYTGQ GGNADKDKQS SDQKLERGNL
301: ALEKSLRRDS AVRVIRGLKE ASHNAKIYIY DGLYEIKESW VEKGKSGHNT FKYKLVRAPG QPPAFASWTA IQKWKTGVPS RQGLILPDMT SGVESIPVSL
401: VNEVDTDNGP AYFTYSTTVK YSESFKLMQP SFGCDCANLC KPGNLDCHCI RKNGGDFPYT GNGILVSRKP MIYECSPSCP CSTCKNKVTQ MGVKVRLEVF
501: KTANRGWGLR SWDAIRAGSF ICIYVGEAKD KSKVQQTMAN DDYTFDTTNV YNPFKWNYEP GLADEDACEE MSEESEIPLP LIISAKNVGN VARFMNHSCS
601: PNVFWQPVSY ENNSQLFVHV AFFAISHIPP MTELTYDYGV SRPSGTQNGN PLYGKRKCFC GSAYCRGSFG
Arabidopsis Description
SUVH1Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF80]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.