Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG21283 | Sorghum | nucleus | 55.19 | 54.51 |
| OQU77390 | Sorghum | nucleus | 53.11 | 52.46 |
| Zm00001d024814_P001 | Maize | nucleus | 45.23 | 38.79 |
| Zm00001d050594_P001 | Maize | nucleus | 33.2 | 37.91 |
| TraesCS1B01G283000.1 | Wheat | nucleus | 26.14 | 35.0 |
| TraesCS7B01G093600.1 | Wheat | nucleus | 24.9 | 33.33 |
| Zm00001d024809_P001 | Maize | nucleus | 38.17 | 32.17 |
| Zm00001d006791_P001 | Maize | nucleus | 20.33 | 32.03 |
| TraesCS7D01G189800.2 | Wheat | nucleus | 25.73 | 31.31 |
| TraesCS7A01G188800.1 | Wheat | nucleus | 22.82 | 30.39 |
| HORVU7Hr1G038390.1 | Barley | mitochondrion, nucleus, plastid | 23.65 | 27.8 |
| TraesCS7A01G120900.1 | Wheat | nucleus | 29.05 | 27.13 |
| Zm00001d024810_P001 | Maize | nucleus | 43.57 | 26.92 |
| Zm00001d045162_P001 | Maize | nucleus | 31.95 | 26.55 |
| TraesCS7B01G019400.1 | Wheat | nucleus | 26.14 | 26.36 |
| HORVU7Hr1G028140.1 | Barley | nucleus | 23.24 | 25.93 |
| TraesCS7D01G118600.1 | Wheat | nucleus | 29.46 | 25.91 |
| TraesCS7D01G108100.1 | Wheat | nucleus | 28.22 | 24.91 |
| TraesCS7D01G108000.1 | Wheat | nucleus | 28.22 | 24.82 |
| TraesCS7B01G019200.1 | Wheat | nucleus | 28.22 | 24.82 |
| HORVU7Hr1G024150.1 | Barley | nucleus | 24.48 | 24.79 |
| TraesCS7A01G121100.1 | Wheat | nucleus | 26.97 | 23.72 |
| HORVU7Hr1G025580.1 | Barley | cytosol, nucleus, plastid | 27.39 | 22.15 |
| TraesCS1D01G362000.1 | Wheat | nucleus | 26.56 | 21.05 |
| TraesCS7A01G135300.1 | Wheat | nucleus | 24.9 | 20.55 |
| HORVU1Hr1G080380.1 | Barley | nucleus | 27.8 | 19.88 |
| TraesCS1A01G357600.1 | Wheat | nucleus | 28.63 | 19.71 |
| TraesCS1B01G374300.1 | Wheat | nucleus | 27.8 | 19.14 |
| TraesCS7B01G036700.1 | Wheat | nucleus | 29.05 | 16.36 |
| TraesCS7D01G135200.1 | Wheat | nucleus | 28.63 | 16.08 |
| TraesCS7A01G135100.1 | Wheat | nucleus | 28.63 | 16.08 |
| TraesCS7A01G135000.1 | Wheat | nucleus | 28.22 | 15.85 |
| TraesCS7D01G135000.1 | Wheat | nucleus | 28.22 | 15.81 |
| TraesCS7B01G036500.1 | Wheat | nucleus | 28.22 | 15.81 |
| PGSC0003DMT400086891 | Potato | nucleus | 14.11 | 15.74 |
| TraesCS7A01G135200.1 | Wheat | nucleus | 27.8 | 15.62 |
| TraesCS7D01G135300.1 | Wheat | nucleus | 27.8 | 15.58 |
| TraesCS7D01G135500.1 | Wheat | nucleus | 25.73 | 15.46 |
| TraesCS7D01G135700.1 | Wheat | nucleus | 27.8 | 15.4 |
| Solyc02g082380.1.1 | Tomato | nucleus | 14.11 | 15.32 |
| TraesCS2B01G617700.1 | Wheat | nucleus | 24.9 | 15.04 |
| TraesCS7A01G135400.1 | Wheat | nucleus | 26.56 | 14.88 |
| TraesCS2D01G567700.1 | Wheat | nucleus | 23.24 | 14.81 |
| TraesCS7D01G135600.1 | Wheat | nucleus | 21.16 | 14.33 |
| Os06t0173800-00 | Rice | vacuole | 18.26 | 13.46 |
| Solyc02g082390.1.1 | Tomato | nucleus | 14.94 | 12.81 |
| Zm00001d021415_P001 | Maize | nucleus | 17.43 | 12.17 |
| PGSC0003DMT400091980 | Potato | nucleus | 15.77 | 9.43 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:103635903 | MapMan:15.5.2.2 | ProteinID:AQK95188.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7V5I7 | InterPro:Myb_dom | InterPro:Myb_dom_plants |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR44042 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | UniParc:UPI000221EB93 | EnsemblPlantsGene:Zm00001d010889 | EnsemblPlants:Zm00001d010889_P001 | EnsemblPlants:Zm00001d010889_T001 | SEG:seg |
Description
Myb related protein1Myb protein1
Coordinates
chr8:-:132313361..132314587
Molecular Weight (calculated)
27525.0 Da
IEP (calculated)
8.649
GRAVY (calculated)
-0.691
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPNFNSVWS APEINMMNSL ITSHIANNTY TNNQHVVASR SAIVNHNNFG MPTEVVPPVD NMDMMQGYLM DDTDAMRLVQ GQQHMPNVVP NQRRHAVKFW
101: TTDEHRNFLR GLEVFGRGKW KNISKYFVPT RTPVQISSHA QKYFRRQECT TEKQRFSIND VGLYDTQPWV RQNNSSSSWE ALTFTAGRAY NNTNYCAFNS
201: LPYASSQASN NQVATWITDQ QATASSSIAP PATEESQIYN R
101: TTDEHRNFLR GLEVFGRGKW KNISKYFVPT RTPVQISSHA QKYFRRQECT TEKQRFSIND VGLYDTQPWV RQNNSSSSWE ALTFTAGRAY NNTNYCAFNS
201: LPYASSQASN NQVATWITDQ QATASSSIAP PATEESQIYN R
001: MSSSTMYRGV NMFSPANTNW IFQEVREATW TAEENKRFEK ALAYLDDKDN LESWSKIADL IPGKTVADVI KRYKELEDDV SDIEAGLIPI PGYGGDASSA
101: ANSDYFFGLE NSSYGYDYVV GGKRSSPAMT DCFRSPMPEK ERKKGVPWTE DEHLRFLMGL KKYGKGDWRN IAKSFVTTRT PTQVASHAQK YFLRQLTDGK
201: DKRRSSIHDI TTVNIPDADA SATATTADVA LSPTPANSFD VFLQPNPHYS FASASASSYY NAFPQWS
101: ANSDYFFGLE NSSYGYDYVV GGKRSSPAMT DCFRSPMPEK ERKKGVPWTE DEHLRFLMGL KKYGKGDWRN IAKSFVTTRT PTQVASHAQK YFLRQLTDGK
201: DKRRSSIHDI TTVNIPDADA SATATTADVA LSPTPANSFD VFLQPNPHYS FASASASSYY NAFPQWS
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LFB6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.