Factsheet for Zm00001d011956_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid, mitochondrion

Predictor Summary:

plastid 3
nucleus 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88147	Sorghum	nucleus	78.85	82.71
Zm00001d042272_P003	Maize	nucleus	73.76	79.91
Os01t0927000-01	Rice	nucleus	67.31	73.91
TraesCS3D01G433900.1	Wheat	nucleus	67.03	70.72
TraesCS3B01G475200.1	Wheat	nucleus	63.46	70.32
TraesCS3A01G441200.1	Wheat	nucleus	66.62	70.29
HORVU3Hr1G096250.8	Barley	golgi, mitochondrion, nucleus, plastid	67.86	64.49
GSMUA_Achr8P00500_001	Banana	extracellular	22.39	59.71
VIT_14s0068g01090.t01	Wine grape	nucleus	38.46	53.33
KRG94709	Soybean	nucleus	21.7	52.49
CDX70530	Canola	nucleus	39.01	47.1
Bra006226.1-P	Field mustard	nucleus	38.6	46.99
CDX78549	Canola	nucleus	38.74	46.69
Solyc02g094520.2.1	Tomato	nucleus	42.31	45.49
AT5G13960.1	Thale cress	nucleus	37.91	44.23
KRH20251	Soybean	nucleus, plastid	39.84	43.81
KRH06819	Soybean	nucleus	42.17	42.64
GSMUA_Achr8P00490_001	Banana	nucleus	21.15	42.54
Zm00001d010646_P001	Maize	plastid	22.66	25.31
Zm00001d041005_P001	Maize	nucleus	23.76	24.75
Zm00001d031858_P001	Maize	nucleus	21.43	23.93
Zm00001d038541_P002	Maize	nucleus	22.66	23.84
Zm00001d043135_P003	Maize	nucleus	23.63	22.08
Zm00001d006369_P002	Maize	nucleus	9.62	20.65
Zm00001d019195_P001	Maize	nucleus	23.35	19.86
Zm00001d005445_P001	Maize	nucleus	15.25	19.44
Zm00001d019520_P001	Maize	nucleus	15.93	17.66
Zm00001d032343_P001	Maize	plastid	24.04	15.82
Zm00001d051126_P004	Maize	nucleus	10.03	14.4
Zm00001d050267_P001	Maize	peroxisome	11.4	14.0
Zm00001d005650_P001	Maize	plastid	24.86	13.91
Zm00001d049884_P006	Maize	nucleus	12.64	12.38
Zm00001d031851_P002	Maize	nucleus	12.64	12.35
Zm00001d002938_P001	Maize	nucleus	10.99	11.25
Zm00001d017798_P002	Maize	nucleus	13.19	6.43
Zm00001d051590_P001	Maize	nucleus	9.75	4.71
Zm00001d044165_P001	Maize	nucleus	1.1	2.63

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.30.280.10	EntrezGene:542089	UniProt:A0A1D6G529	ProteinID:AQK98396.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740
GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	InterPro:IPR001214	InterPro:IPR003105
InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR036987	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033
PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PANTHER:PTHR22884	PANTHER:PTHR22884:SF390
InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466
SMART:SM00468	SMART:SM00508	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697
UniParc:UPI000843D6A6	EnsemblPlantsGene:Zm00001d011956	EnsemblPlants:Zm00001d011956_P002	EnsemblPlants:Zm00001d011956_T002	SEG:seg	:

Description

set domain gene118Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH4

Coordinates

chr8:-:165140334..165155029

Molecular Weight (calculated)

81150.5 Da

IEP (calculated)

8.758

GRAVY (calculated)

-0.441

Length

728 amino acids

Sequence
(BLAST)

001: MRGAYPVLPT LLCSRRFALL PSPPAHPDLV LPPFPLSRSA GAPRLLRRHR EGELLVSLAE LDAAVRCSLR SWWMANMDSV VVMEVAPVPI PTFMDATPLN
101: PPLPLVVEEL VLRRSARYLN RPTRPNYADQ EPPKNPGGRG RGKRKRDEEK PELAAQQGTK TPGRNDSNVE AGERKPMPVT AAVPACCAGV AAEDDATPTG
201: KSAKLRVKET LRAFNSHYLH FVQEEQKRAQ AAIQEIEAKG GLKRQTKGGK KKSSKQEAEA EEKEKRPSKR PDLKAITKVP WLDVGDQFYS RAEMVVLGIH
301: SHWLNGIDYM GMKYQGKKEY ANLTFPLATC IVMSGIYEDD LDKADEIIYT GQGGNDLLGN HRQIGSQQLK RGNLALKNSR KNGNPVRVIR GHLSKNSYTG
401: KVYTYDGLYK VVDDWVQNGV QGHVVFKFKL KRLEGQPSLT TSEFCICWKY YVFVSSHIYV SRCDLLVQKL RQLFLNYLGF TYLKSLKIPK DIKIPSSIIG
501: CDCEGDCASN KNCSCAQRNG SDLPYVSYKN IGRLVEPKAV VFECGANCSC NHDCVFKTAS KGWGVRTWDT ILPGAPICEY TGVLRRTEDL DGSQNNYCFD
601: IDCLQTMKGL DGREKRAGSE MHLPNLYPEN DSDAPPAPEY CIDGSSIGNF ARFINHSCQP NLFVQCVMSS HNDVKLAKVM LFAADTILPL QELSYDYGYR
701: LDSVVGPDGK IVKLPCHCGA PDCRKRLY

Best Arabidopsis Sequence Match ( AT2G35160.1 )
(BLAST)

001: MVHSESSILS SLRGGDGGGI PCSKDELAIN GSYTDPMGRR KSKRFKVAAE SEFSPDFGSI TRQLRSRRMQ KEFTVETYET RNVSDVCVLS SQADVELIPG
101: EIVAERDSFK SVDCNDMSVG LTEGAESLGV NMQEPMKDRN MPENTSEQNM VEVHPPSISL PEEDMMGSVC RKSITGTKEL HGRTISVGRD LSPNMGSKFS
201: KNGKTAKRSI SVEEENLVLE KSDSGDHLGP SPEVLELEKS EVWIITDKGV VMPSPVKPSE KRNGDYGEGS MRKNSERVAL DKKRLASKFR LSNGGLPSCS
301: SSGDSARYKV KETMRLFHET CKKIMQEEEA RPRKRDGGNF KVVCEASKIL KSKGKNLYSG TQIIGTVPGV EVGDEFQYRM ELNLLGIHRP SQSGIDYMKD
401: DGGELVATSI VSSGGYNDVL DNSDVLIYTG QGGNVGKKKN NEPPKDQQLV TGNLALKNSI NKKNPVRVIR GIKNTTLQSS VVAKNYVYDG LYLVEEYWEE
501: TGSHGKLVFK FKLRRIPGQP ELPWKEVAKS KKSEFRDGLC NVDITEGKET LPICAVNNLD DEKPPPFIYT AKMIYPDWCR PIPPKSCGCT NGCSKSKNCA
601: CIVKNGGKIP YYDGAIVEIK PLVYECGPHC KCPPSCNMRV SQHGIKIKLE IFKTESRGWG VRSLESIPIG SFICEYAGEL LEDKQAESLT GKDEYLFDLG
701: DEDDPFTINA AQKGNIGRFI NHSCSPNLYA QDVLYDHEEI RIPHIMFFAL DNIPPLQELS YDYNYKIDQV YDSNGNIKKK FCYCGSAECS GRLY

Arabidopsis Description

SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.