Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d035113_P001 | Maize | nucleus | 68.93 | 43.68 |
| TraesCS6B01G361300.1 | Wheat | nucleus | 20.15 | 40.23 |
| KXG24287 | Sorghum | nucleus | 58.76 | 40.0 |
| TraesCS6D01G309500.4 | Wheat | nucleus | 19.96 | 39.85 |
| HORVU6Hr1G080290.6 | Barley | nucleus | 19.21 | 38.64 |
| OQU75762 | Sorghum | nucleus | 52.73 | 34.7 |
| Zm00001d017505_P003 | Maize | plastid | 70.62 | 33.01 |
| GSMUA_Achr2P23110_001 | Banana | nucleus | 7.34 | 27.27 |
| TraesCS1B01G326700.2 | Wheat | nucleus | 39.36 | 26.52 |
| TraesCS1D01G314900.1 | Wheat | nucleus | 39.17 | 26.4 |
| HORVU1Hr1G067100.2 | Barley | nucleus | 38.61 | 26.05 |
| TraesCS1A01G314400.2 | Wheat | nucleus | 38.42 | 25.89 |
| TraesCS6A01G330400.1 | Wheat | nucleus, plastid | 17.7 | 18.69 |
| Bra033600.1-P | Field mustard | endoplasmic reticulum | 10.36 | 17.63 |
| CDX87111 | Canola | nucleus | 15.44 | 15.19 |
| CDY16866 | Canola | vacuole | 15.07 | 14.71 |
| CDY56766 | Canola | nucleus | 14.69 | 14.55 |
| CDX90315 | Canola | nucleus | 16.01 | 14.36 |
| CDY12124 | Canola | nucleus | 15.82 | 14.26 |
| Bra010701.1-P | Field mustard | nucleus | 15.82 | 14.24 |
| AT4G39160.2 | Thale cress | nucleus | 16.01 | 13.62 |
| KRG92007 | Soybean | nucleus | 13.18 | 13.49 |
| PGSC0003DMT400045728 | Potato | nucleus | 17.14 | 12.75 |
| Solyc02g081640.2.1 | Tomato | nucleus | 16.76 | 12.62 |
| CDX72715 | Canola | nucleus | 11.68 | 11.95 |
| KRH34776 | Soybean | nucleus | 11.11 | 11.85 |
| Os03t0840500-00 | Rice | cytosol, nucleus | 8.29 | 10.3 |
| VIT_03s0038g04460.t01 | Wine grape | nucleus | 20.15 | 10.16 |
| KRH77688 | Soybean | nucleus | 14.12 | 8.02 |
| KRH27726 | Soybean | nucleus | 14.31 | 8.02 |
Protein Annotations
| MapMan:15.4.3.2 | MapMan:15.5.2.2 | UniProt:A0A1D6HF98 | ProteinID:AQK73318.1 | GO:GO:0000126 | GO:GO:0001026 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006359 | GO:GO:0006383 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | PFAM:PF15963 | PANTHER:PTHR22929 | InterPro:TFIIIB_B'' |
| UniParc:UPI0008453915 | EnsemblPlantsGene:Zm00001d017507 | EnsemblPlants:Zm00001d017507_P001 | EnsemblPlants:Zm00001d017507_T001 | SEG:seg | : |
Description
MYB-related-transcription factor 11Homeodomain-like superfamily protein
Coordinates
chr5:+:197864412..197884322
Molecular Weight (calculated)
59865.2 Da
IEP (calculated)
4.908
GRAVY (calculated)
-1.051
Length
531 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSPATARAP GVEAQAPAAQ PNRRAQEPRA ILDSEGLLAT DNSKGCNLAN LDNLLEESVQ EETIAKFHSD LQPNLGKASS QVAAIKINVV AVAPIVGVCD
101: SNNDMYKEPK DQETKWHADV NLDNHNEPIN PPIDGTQSMF GEVPGREKGK SKSVSFALSD ASGIASPIDT NSEMGNIGDS CSDKLTDENL SNSSRHIAEK
201: HSITKDQYSN EQDHEREPLD HAVQQQPKSD VGERASSMKR RCKKKVQKVG TPNHTVDDYF GEDCVEPSLA EEDNDTGDHY TTGNKHKARK KSRGGVEESQ
301: QQKVQKNKSK VSSRGRKRTL KDESTEKPEK KLTQRIRQRI PKEVKALLET PREQIKPMKL CASHLRNFQL DDMDDLGYRD EEARFFDNDI TEEHGLRQFG
401: SDFAMIQQLF PDKTRHQVRQ KFKSEERKNP LLVHDAIVHR SGDSLYFKKV IKQLNIEDVV LPDIKSTQNK MNVLDDLNEE ENSSNWLNEE HDVQMADVEE
501: EHGEQMDDVE EERDLGNDGG DDDLGDVFDW Y
101: SNNDMYKEPK DQETKWHADV NLDNHNEPIN PPIDGTQSMF GEVPGREKGK SKSVSFALSD ASGIASPIDT NSEMGNIGDS CSDKLTDENL SNSSRHIAEK
201: HSITKDQYSN EQDHEREPLD HAVQQQPKSD VGERASSMKR RCKKKVQKVG TPNHTVDDYF GEDCVEPSLA EEDNDTGDHY TTGNKHKARK KSRGGVEESQ
301: QQKVQKNKSK VSSRGRKRTL KDESTEKPEK KLTQRIRQRI PKEVKALLET PREQIKPMKL CASHLRNFQL DDMDDLGYRD EEARFFDNDI TEEHGLRQFG
401: SDFAMIQQLF PDKTRHQVRQ KFKSEERKNP LLVHDAIVHR SGDSLYFKKV IKQLNIEDVV LPDIKSTQNK MNVLDDLNEE ENSSNWLNEE HDVQMADVEE
501: EHGEQMDDVE EERDLGNDGG DDDLGDVFDW Y
001: MDLDFDDQPS DHAAPAVRAG ARFKPKGRPQ PKKKQVSLST TQTTLSPDVA QEKLSTQSED LVPLDGSSEI PSNALPSETN VPDSGSINKS TIGTLSEENE
101: DAFPRGVHWS VKPSILRACN NVNLVGNRRD DGIEATTSFP DDPRTQDSAI FGDYVTPETG ADEGRVDMET LDIVQEEGTT SSYVQHTGKL QPKPRLLETV
201: VEEPEPHYSA GDTGYFPMGT NESEFMANVE SRNGFSTYED LQEEELNIPE APRETVGEME AQNASGGWEQ EEQGVSPCIN NTVTGEEENC MGNTVEEQSK
301: RESKTGKSKR ATSRKRKKTS EEPNKSSEKT EQKKFKHSSR RQKRTLEKEL LETPDHEIRS LPLRDMLRLV EYKEWMQKKE AKGAGVQPSQ ESNNMNGSGS
401: QYHSQGFDEE DEFGDFGIES SEYQENNVVK PDSPVNYQTY MNKTSRTRWS KEDTELFYEG IQEFGSNLSM IQQLFPERTR EQMKLKFKLE ERRNPLKLND
501: ALSSRSKHFT HFKNVIKKLQ QEAAAAKEGE EEEEAGAEAE TTDVPENEEP EKSEETERAS DGVAAGVKES DGGDVENGVR SDGGDECDDD EDFWNSYKSD
601: M
101: DAFPRGVHWS VKPSILRACN NVNLVGNRRD DGIEATTSFP DDPRTQDSAI FGDYVTPETG ADEGRVDMET LDIVQEEGTT SSYVQHTGKL QPKPRLLETV
201: VEEPEPHYSA GDTGYFPMGT NESEFMANVE SRNGFSTYED LQEEELNIPE APRETVGEME AQNASGGWEQ EEQGVSPCIN NTVTGEEENC MGNTVEEQSK
301: RESKTGKSKR ATSRKRKKTS EEPNKSSEKT EQKKFKHSSR RQKRTLEKEL LETPDHEIRS LPLRDMLRLV EYKEWMQKKE AKGAGVQPSQ ESNNMNGSGS
401: QYHSQGFDEE DEFGDFGIES SEYQENNVVK PDSPVNYQTY MNKTSRTRWS KEDTELFYEG IQEFGSNLSM IQQLFPERTR EQMKLKFKLE ERRNPLKLND
501: ALSSRSKHFT HFKNVIKKLQ QEAAAAKEGE EEEEAGAEAE TTDVPENEEP EKSEETERAS DGVAAGVKES DGGDVENGVR SDGGDECDDD EDFWNSYKSD
601: M
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JVA4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.