Factsheet for Zm00001d019195_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d020762_P001
Zm00001d022168_P001
Zm00001d029409_P001
Zm00001d047043_P001
Zm00001d047214_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73100.1	Zm00001d020762_P001	AT5G09540.1	21798944
AT1G73100.1	Zm00001d022168_P001	AT5G09540.1	21798944
AT1G73100.1	Zm00001d029409_P001	AT5G09540.1	21798944
AT1G73100.1	Zm00001d047043_P001	AT5G09540.1	21798944
AT1G73100.1	Zm00001d047214_P001	AT5G09540.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96081	Sorghum	nucleus	88.67	91.45
TraesCS4B01G280000.1	Wheat	nucleus	67.41	79.59
TraesCS4D01G278500.1	Wheat	nucleus	74.53	77.9
Os11t0602200-01	Rice	nucleus	73.95	77.86
TraesCS3A01G385200.1	Wheat	plastid	65.65	77.41
TraesCS4A01G023500.1	Wheat	nucleus	74.77	76.74
HORVU4Hr1G074120.1	Barley	nucleus	74.18	75.6
TraesCS3D01G378200.1	Wheat	plastid	60.16	75.18
TraesCS3B01G417400.1	Wheat	nucleus	72.55	74.55
CDY04931	Canola	cytosol, extracellular, nucleus	5.02	56.58
GSMUA_Achr5P27620_001	Banana	nucleus	40.19	55.66
Zm00001d010646_P001	Maize	plastid	40.65	53.37
Bra009408.1-P	Field mustard	nucleus	31.31	52.34
Zm00001d038541_P002	Maize	nucleus	41.94	51.88
KRH56252	Soybean	nucleus	12.15	48.83
CDY11319	Canola	nucleus	35.86	47.6
Bra028776.1-P	Field mustard	nucleus	35.28	47.56
Bra005829.1-P	Field mustard	nucleus	35.75	47.44
CDX80930	Canola	nucleus	35.28	46.89
Solyc09g082050.2.1	Tomato	nucleus	35.28	46.68
Zm00001d043135_P003	Maize	nucleus	42.41	46.6
CDX68245	Canola	nucleus	35.98	46.25
AT2G05900.1	Thale cress	cytoskeleton, cytosol, nucleus	16.82	46.15
CDY11129	Canola	nucleus	35.98	46.04
CDX96449	Canola	nucleus	35.28	45.97
CDY61331	Canola	nucleus	35.86	45.89
AT5G04940.2	Thale cress	nucleus	35.86	45.82
Zm00001d041005_P001	Maize	nucleus	37.38	45.78
KRH20576	Soybean	nucleus	35.86	45.62
PGSC0003DMT400077329	Potato	nucleus	35.75	45.6
CDX98805	Canola	nucleus	34.81	45.5
Bra009409.1-P	Field mustard	nucleus	35.16	45.26
VIT_13s0047g00120.t01	Wine grape	nucleus	37.85	45.25
KRH13229	Soybean	nucleus	35.51	45.17
AT1G73100.1	Thale cress	nucleus	35.28	45.14
CDY59935	Canola	nucleus	34.46	44.76
Bra016018.1-P	Field mustard	nucleus	35.05	44.31
CDX98804	Canola	nucleus	31.19	43.56
KRH62706	Soybean	nucleus	33.53	43.03
KRH66648	Soybean	nucleus	35.51	42.94
VIT_08s0040g00360.t01	Wine grape	nucleus	36.68	42.61
CDY14135	Canola	nucleus	35.4	41.97
Solyc10g077070.1.1	Tomato	nucleus	34.7	41.6
PGSC0003DMT400018512	Potato	nucleus	34.81	41.5
KRG95012	Soybean	plastid	22.43	39.34
CDY26218	Canola	nucleus	30.72	37.68
AT1G17770.1	Thale cress	nucleus	30.02	37.09
CDY66122	Canola	nucleus	30.26	36.27
AT2G24740.1	Thale cress	nucleus	30.14	34.17
CDY56214	Canola	nucleus	31.43	33.92
Bra004258.1-P	Field mustard	nucleus	32.13	29.92
Bra025949.1-P	Field mustard	nucleus	30.96	29.68
CDX70182	Canola	nucleus	35.05	29.64
CDY26221	Canola	nucleus	30.72	29.39
Zm00001d031858_P001	Maize	nucleus	22.2	29.14
Zm00001d042272_P003	Maize	nucleus	21.85	27.83
Zm00001d006369_P002	Maize	nucleus	10.28	25.96
Zm00001d005445_P001	Maize	nucleus	16.94	25.39
Zm00001d011956_P002	Maize	mitochondrion, nucleus, plastid	19.86	23.35
Zm00001d019520_P001	Maize	nucleus	16.94	22.07
Zm00001d051126_P004	Maize	nucleus	12.03	20.32
Zm00001d032343_P001	Maize	plastid	22.66	17.54
Zm00001d005650_P001	Maize	plastid	24.53	16.14
Zm00001d049884_P006	Maize	nucleus	13.43	15.48
CDY01852	Canola	plasma membrane	33.53	15.46
Zm00001d031851_P002	Maize	nucleus	12.97	14.9
Zm00001d050267_P001	Maize	peroxisome	9.81	14.17
Zm00001d002938_P001	Maize	nucleus	10.75	12.94
Zm00001d017798_P002	Maize	nucleus	12.15	6.97
Zm00001d051590_P001	Maize	nucleus	9.58	5.44
Zm00001d044165_P001	Maize	nucleus	0.93	2.63
CDX86631	Canola	cytosol	0.12	1.23
CDX89821	Canola	cytosol	0.12	1.23
CDY21127	Canola	cytosol	0.12	1.23
CDY53193	Canola	mitochondrion	0.12	0.71

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	UniProt:A0A1D6HW59
InterPro:AT_hook_DNA-bd_motif	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270
GO:GO:0009987	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538
GO:GO:0032259	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616
InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	ProteinID:ONM52463.1	PFAM:PF00856	PFAM:PF02182
PFAM:PF05033	PRINTS:PR00929	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868	PFscan:PS51015
PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF479	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom
InterPro:SET_dom	SMART:SM00317	SMART:SM00384	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf
InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI000221E5BC	EnsemblPlantsGene:Zm00001d019195	EnsemblPlants:Zm00001d019195_P001
EnsemblPlants:Zm00001d019195_T001	SEG:seg	:	:	:	:

Description

Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH3

Coordinates

chr7:+:21140414..21142984

Molecular Weight (calculated)

93449.1 Da

IEP (calculated)

8.341

GRAVY (calculated)

-0.510

Length

856 amino acids

Sequence
(BLAST)

001: MAQQMASVHL NDTTVVDAKP LRTLTPMFPA PLGLHTFTPQ NSPSVVCVTP FGPYGGGTEL GMPAVPPMFA APVPAAGAEP SQRQPHTANM NGGDTELGMP
101: AVPPMFAAPA PAAGAEPNQG QPHTANMNGT AVNSSVTSLQ TPSAATQESG KRKRGRPKRV PDTTVSSAPS APLAPTISPV PSLPVVTPVP SAPQELNTIV
201: SLTPSSDAPQ ESGKRKRGRP KRIQDVPVMV PLTSQGDSTS VIQTLPGSSV HESGTRRGRP KRLQDSSDIV TPIDSKDSES SPQPPIAAPA ESGKRKRGRP
301: KRIDGSVTPS SHSVFSIDDD AVDTMKRGRP RKIDTKLLQF PSLFSDDPRQ TADNVLMMFD ALRRRLMQMD DVKQAAKQQP NLKAGSIMNN AELRVNKDKR
401: IGEVPGVEVG DMFYFRIEMC LVGLNSQSMA GIDYMSAKFG NEEDPVAISV VSAGVYDNTG DDPDVLVYTG HGMSGKDDQK LERGNLALER SLHRGNPIRV
501: IRSVKDLTCP TGKIYIYDGL YKIKEAWVEK GKSGFNVFKH KLLREPGQPD GIAVWKKTEK WRENPSSRDH VILLDISYGV ENNPVCLVNE VDDEKGPSRF
601: TYTTNLTYGN SLSSMRKMQG CKCISVCLPG DNNCSCTHRN AGDLPYSASG ILVSRMPVLY ECGDSCTCSQ NCRNRVVQKG TQIRFEVFKT GDRGWGLRSW
701: DPIRAGTFIC EYAGEIIDIN RVNGEDDYIF ETSPLEQNLR WNYAPELLGE PSLSDSNETP KQLPIVISAK RTGNIARFMN HSCSPNVFWQ PVLYDHGDEG
801: YPHIAFFAIK HIPPMTELTY DYGQNQRNSI QMGTHSGFRK SKSCLCWSPK CRGSFG

Best Arabidopsis Sequence Match ( AT1G73100.1 )
(BLAST)

001: MQGVPGFNTV PNPNHYDKSI VLDIKPLRSL KPVFPNGNQG PPFVGCPPFG PSSSEYSSFF PFGAQQPTHD TPDLNQTQNT PIPSFVPPLR SYRTPTKTNG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG

Arabidopsis Description

SUVH3Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.