Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 5
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67476 | Soybean | endoplasmic reticulum | 55.74 | 59.92 |
| Zm00001d004505_P001 | Maize | cytosol | 7.87 | 59.22 |
| Zm00001d015022_P001 | Maize | plastid | 7.55 | 58.79 |
| VIT_11s0016g04590.t01 | Wine grape | cytosol | 53.16 | 55.79 |
| Zm00001d034566_P001 | Maize | cytosol | 8.52 | 54.77 |
| Zm00001d027303_P001 | Maize | cytosol | 8.0 | 54.63 |
| Zm00001d009216_P001 | Maize | cytosol | 10.06 | 54.55 |
| Zm00001d016409_P001 | Maize | cytosol, peroxisome, plasma membrane | 11.87 | 50.83 |
| KXG35386 | Sorghum | cytosol | 6.19 | 49.74 |
| Zm00001d004097_P001 | Maize | cytosol | 10.13 | 49.68 |
| Zm00001d019951_P001 | Maize | plasma membrane | 35.16 | 44.53 |
| Zm00001d019960_P001 | Maize | cytosol | 4.77 | 36.45 |
| Zm00001d039633_P001 | Maize | cytosol | 9.81 | 34.39 |
Protein Annotations
| EntrezGene:103632597 | MapMan:24.1.3.2.2 | Gene3D:3.40.50.300 | UniProt:A0A1D6I292 | InterPro:AAA+_ATPase | InterPro:ABCG_PDR_1 |
| InterPro:ABCG_PDR_2 | InterPro:ABC_2_trans | InterPro:ABC_trans_N | InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 | ProteinID:ONM54319.1 | InterPro:P-loop_NTPase | InterPro:PDR_assoc |
| PFAM:PF00005 | PFAM:PF01061 | PFAM:PF08370 | PFAM:PF14510 | PFscan:PS50893 | PANTHER:PTHR19241 |
| PANTHER:PTHR19241:SF306 | SMART:SM00382 | SUPFAM:SSF52540 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000843C60F |
| EnsemblPlantsGene:Zm00001d020134 | EnsemblPlants:Zm00001d020134_P003 | EnsemblPlants:Zm00001d020134_T003 | SEG:seg | : | : |
Description
ABC transporter G family member 40
Coordinates
chr7:-:94949585..94962130
Molecular Weight (calculated)
172497.0 Da
IEP (calculated)
7.508
GRAVY (calculated)
0.067
Length
1550 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAYLVLQMVD LVAVFSGTAS PEDDGNGDAA KALELAQMVV GLAAGVHYYA RSSTMPRQGL RPAPTGACTR PASQIVCACQ STTRRNDLLL VYRFRSVRIK
0101: EGTSPTSSPV FLLPSRPGGG GMDDAGEIHA LGSLRRDGSV WSAASDTVFS SLSSRADGGV DDEEALRWAA LEKLPTYDRA RTAVLAMPEG DLRHVNVQKL
0201: DPQERHALLQ RLAWVGDDHQ RFLSKFKDRV DRVGIDLPKI EVRYQNLNVE AEAYVGSRGL PTILNTYANV LEGIANALHI TPSRKQKISI LHNVSGIIKP
0301: HRMTLLLGPP GAGKTSLLLA LAGTLPSSLK VTGNITYNGH TMDEFEARRS AAYVSQHDLH MGELTVRETV NFSARCQGSG HRYDLLVELS RREKDAGIIP
0401: DKETDTYMKA AATGDQKADV VTNHILKVLG LDVCADTIVG NNMLRGISGG QKKRVTTAEM LVTPGRAVFM DEISTGLDSS TTFQIVNSIR ETIHIVGGTA
0501: VIALLQPAPE TYDLFDDIIL LSDSQVVYSG PREYVLEFFE SVGFKCPQRK GVADFLQEVT SKKDQRQYWK HGDDTYRYVP VKEFAEAFQS FHVGEAIRNE
0601: LAVPFDKSTS HPAALKTSRY GASVKELLKA NIDREILLIK RNSFVYIFKA VQLTLMALIT MTVFLRTNMH RDSISDGRIY MGALFFGVLM VMFNGLAEVG
0701: LTIAKLPVFF KQRDLLFYPA WTYSLPSWII KTPLSLLNVT IWVFITYYVI GFDPNVERLF RQFLLLLLMN EASSGLFRFI AGLARHQVVA STLGSFGILI
0801: CMLLGGFLLA RENVKKWWIW GYWISPLMYA QNAISVNEFL GSSWNKQVIP GSAEPLGKLV LESRGLFPEA KWYWIGVGAL LGYVLLFNIL YTICLTFLKP
0901: FDSNQPTISE EALKIKHANL TGEVLEASSR GRVASTTTTG TLDESNDEAA SNHATVNSSP VNKGMAIRAQ GVTETRLELL KGISGSFRPG VLTALMGVSG
1001: AGKTTLMDVL AGRKTSGYIV GNITISGYPK KQETFARVSG YCEQNDIHSP NVTVYESLAF SAWLRLPADV DSSTRKMFID EVMELVELLP LKDALVGLPG
1101: VSGLSTEQRK RLTIAVELVA NPSIIFMDEP TSGLDARAAA IVMRAIRNTV DTGRTVVCTI HQPSIDIFES FDELFLMKRG GEEIYVGPLG MHSCELVKYF
1201: EGIEGVNKIK DGYNPSTWML EVTSTMQEQI TGINFSEVYK NSELHRRNKT LIKELSTPPE GSSDLSFPTE YSQAFLTQCL ACLWKQSMSY WRNPPYTGVK
1301: YFYTTVIALL FGTMFWGVGR KRDSQQDLFN AIGSMYASVI FMGVQNSGSV QPVVSVERTV FYRERAAHMY SPLPYALGQV VIELPYIFVQ SLIYGVLVYA
1401: MIGFEWTADK FFWYLFFMYF TLAYYTFYGM MVVGLTPNYN VSSVASTAFY AIWNLFSGFL IPRTRIPVWW RWFYWICPIA WTLNGLVTSQ FGDVTETFSD
1501: GGVRISDFVE DYFGYHHDLL WVVAVVVVAF PVLFALLFGL SLKIFNFQKR
0101: EGTSPTSSPV FLLPSRPGGG GMDDAGEIHA LGSLRRDGSV WSAASDTVFS SLSSRADGGV DDEEALRWAA LEKLPTYDRA RTAVLAMPEG DLRHVNVQKL
0201: DPQERHALLQ RLAWVGDDHQ RFLSKFKDRV DRVGIDLPKI EVRYQNLNVE AEAYVGSRGL PTILNTYANV LEGIANALHI TPSRKQKISI LHNVSGIIKP
0301: HRMTLLLGPP GAGKTSLLLA LAGTLPSSLK VTGNITYNGH TMDEFEARRS AAYVSQHDLH MGELTVRETV NFSARCQGSG HRYDLLVELS RREKDAGIIP
0401: DKETDTYMKA AATGDQKADV VTNHILKVLG LDVCADTIVG NNMLRGISGG QKKRVTTAEM LVTPGRAVFM DEISTGLDSS TTFQIVNSIR ETIHIVGGTA
0501: VIALLQPAPE TYDLFDDIIL LSDSQVVYSG PREYVLEFFE SVGFKCPQRK GVADFLQEVT SKKDQRQYWK HGDDTYRYVP VKEFAEAFQS FHVGEAIRNE
0601: LAVPFDKSTS HPAALKTSRY GASVKELLKA NIDREILLIK RNSFVYIFKA VQLTLMALIT MTVFLRTNMH RDSISDGRIY MGALFFGVLM VMFNGLAEVG
0701: LTIAKLPVFF KQRDLLFYPA WTYSLPSWII KTPLSLLNVT IWVFITYYVI GFDPNVERLF RQFLLLLLMN EASSGLFRFI AGLARHQVVA STLGSFGILI
0801: CMLLGGFLLA RENVKKWWIW GYWISPLMYA QNAISVNEFL GSSWNKQVIP GSAEPLGKLV LESRGLFPEA KWYWIGVGAL LGYVLLFNIL YTICLTFLKP
0901: FDSNQPTISE EALKIKHANL TGEVLEASSR GRVASTTTTG TLDESNDEAA SNHATVNSSP VNKGMAIRAQ GVTETRLELL KGISGSFRPG VLTALMGVSG
1001: AGKTTLMDVL AGRKTSGYIV GNITISGYPK KQETFARVSG YCEQNDIHSP NVTVYESLAF SAWLRLPADV DSSTRKMFID EVMELVELLP LKDALVGLPG
1101: VSGLSTEQRK RLTIAVELVA NPSIIFMDEP TSGLDARAAA IVMRAIRNTV DTGRTVVCTI HQPSIDIFES FDELFLMKRG GEEIYVGPLG MHSCELVKYF
1201: EGIEGVNKIK DGYNPSTWML EVTSTMQEQI TGINFSEVYK NSELHRRNKT LIKELSTPPE GSSDLSFPTE YSQAFLTQCL ACLWKQSMSY WRNPPYTGVK
1301: YFYTTVIALL FGTMFWGVGR KRDSQQDLFN AIGSMYASVI FMGVQNSGSV QPVVSVERTV FYRERAAHMY SPLPYALGQV VIELPYIFVQ SLIYGVLVYA
1401: MIGFEWTADK FFWYLFFMYF TLAYYTFYGM MVVGLTPNYN VSSVASTAFY AIWNLFSGFL IPRTRIPVWW RWFYWICPIA WTLNGLVTSQ FGDVTETFSD
1501: GGVRISDFVE DYFGYHHDLL WVVAVVVVAF PVLFALLFGL SLKIFNFQKR
0001: MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
0101: LLWKLKKRID RVGIDLPTIE VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG RMALLLGPPS SGKTTLLLAL
0201: AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM
0301: TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI
0401: AEGEIIYEGP RDHVVEFFET MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL ALPFDKTKSH PAALTTKKYG
0501: VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW
0601: VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG
0701: YWISPIMYGQ NAILANEFFG HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG KPQAVIAEEP ASDETELQSA
0801: RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG
0901: YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM
1001: DEPTSGLDAR AAAIVMRTVR NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN KITEGYNPAT WMLEVSTTSQ
1101: EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD
1201: LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF
1301: YGMMAVAMTP NHHIASVVSS AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ FIREFYGYRE GFLGVVAAMN
1401: VIFPLLFAVI FAIGIKSFNF QKR
Arabidopsis Description
ABCG40ABC transporter G family member 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9E1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.