Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG35797 | Sorghum | nucleus | 62.27 | 71.35 |
| Os09t0463700-01 | Rice | nucleus | 51.36 | 60.75 |
| Zm00001d047043_P001 | Maize | nucleus | 40.23 | 40.88 |
| TraesCS5A01G245400.1 | Wheat | cytosol, nucleus, plastid | 47.73 | 39.77 |
| TraesCS5D01G252200.1 | Wheat | cytosol, nucleus, plastid | 47.27 | 39.47 |
| HORVU5Hr1G069570.1 | Barley | nucleus | 48.86 | 39.38 |
| TraesCS5B01G242900.1 | Wheat | cytosol | 47.05 | 39.28 |
| HORVU5Hr1G055620.1 | Barley | cytosol, nucleus, plastid | 24.77 | 36.82 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 23.41 | 31.69 |
| AT5G09540.1 | Thale cress | nucleus | 17.95 | 28.21 |
| GSMUA_Achr10P... | Banana | cytosol | 26.36 | 27.55 |
| CDY21586 | Canola | cytosol | 17.95 | 27.34 |
| Bra009389.1-P | Field mustard | cytosol | 17.73 | 26.62 |
| CDY69792 | Canola | cytosol | 17.73 | 26.62 |
| Zm00001d029409_P001 | Maize | nucleus, peroxisome, plastid | 22.05 | 24.49 |
| Zm00001d047214_P001 | Maize | extracellular | 22.05 | 24.43 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 22.27 | 24.32 |
| Zm00001d022168_P001 | Maize | cytosol, mitochondrion, peroxisome | 23.64 | 23.53 |
| CDY31322 | Canola | cytosol | 19.32 | 22.79 |
| Bra031921.1-P | Field mustard | cytosol | 19.09 | 22.76 |
| Zm00001d030537_P001 | Maize | cytosol, nucleus, plastid | 9.32 | 20.81 |
| KRH42098 | Soybean | nucleus | 20.91 | 20.22 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 22.27 | 20.16 |
| KRH10601 | Soybean | nucleus | 22.5 | 19.92 |
| Solyc07g007230.2.1 | Tomato | nucleus | 19.09 | 19.72 |
| KRH49811 | Soybean | nucleus | 20.91 | 19.53 |
| AT5G64360.7 | Thale cress | nucleus | 20.45 | 19.4 |
| KRH21766 | Soybean | nucleus | 21.82 | 19.24 |
| PGSC0003DMT400079004 | Potato | cytosol | 20.91 | 18.0 |
| Bra024289.1-P | Field mustard | nucleus | 18.41 | 17.65 |
| CDX84519 | Canola | nucleus | 18.86 | 17.47 |
| Solyc11g006140.1.1 | Tomato | nucleus | 22.27 | 16.47 |
| CDY58269 | Canola | nucleus | 18.41 | 16.14 |
| CDY46799 | Canola | nucleus | 14.32 | 16.07 |
| Solyc11g006170.1.1 | Tomato | nucleus | 22.73 | 15.41 |
| PGSC0003DMT400073845 | Potato | cytosol | 22.73 | 15.34 |
| Solyc01g105780.2.1 | Tomato | nucleus | 22.5 | 13.81 |
| AT1G62970.1 | Thale cress | nucleus | 24.09 | 13.3 |
| PGSC0003DMT400083794 | Potato | nucleus | 22.27 | 13.19 |
| CDY45473 | Canola | nucleus | 22.27 | 13.1 |
| CDY45966 | Canola | nucleus | 21.82 | 12.9 |
| Bra027007.1-P | Field mustard | nucleus | 21.82 | 12.87 |
Protein Annotations
| Gene3D:1.10.287.110 | EntrezGene:100191722 | MapMan:35.2 | UniProt:B4F9X5 | EMBL:BT033913 | InterPro:DnaJ_domain |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | ProteinID:ONM55540.1 | PRINTS:PR01217 | PANTHER:PTHR45496 |
| SUPFAM:SSF46565 | UniParc:UPI00017B633E | EnsemblPlantsGene:Zm00001d020762 | EnsemblPlants:Zm00001d020762_P001 | EnsemblPlants:Zm00001d020762_T001 | SEG:seg |
Description
GRMZM2G145152Chaperone DnaJ-domain superfamily protein
Coordinates
chr7:+:131549688..131551010
Molecular Weight (calculated)
46297.3 Da
IEP (calculated)
10.034
GRAVY (calculated)
-0.343
Length
440 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPSAVGSSR RKAEQWLSVA EKLMVARDIE GCKQFASQAL AADPHTPGAD DLHAAAISLL AAQQRRLPNG QPDPYGVLGL DPANPASRRP DAIHSQYRRL
101: SFLLNRSHQD RPCSLAFAEA ARLVADAWAF LSDPVLKSSL DVDLDAAAAA RAYHSPPNLP QPHSQPHLPA RLTPPVAAPS PRSTPPLVSP LPRATSPPAA
201: SPPRQTQRPA VPQTRSTPPP AASAPRSTPP PPVSPQTLST PLPAAPAPAP RSTPPPVVPQ TPSSTLRPTT PQTPVAATVP AAKSGAAPSS TFWTVCSACC
301: HIHQFDCQYE TCKLLCPSCR QPFVAKAMAE PPPIVPGTDM YYCTWGFFPV GFPGCPGFER MVNAQPSGVD QLNAPWLGSA GGVHGNAQNG VPPVSAPVVE
401: VPVKDPIEVP AVTPPAKPMR VKVGAKKRGR PKGSKNKKKL
101: SFLLNRSHQD RPCSLAFAEA ARLVADAWAF LSDPVLKSSL DVDLDAAAAA RAYHSPPNLP QPHSQPHLPA RLTPPVAAPS PRSTPPLVSP LPRATSPPAA
201: SPPRQTQRPA VPQTRSTPPP AASAPRSTPP PPVSPQTLST PLPAAPAPAP RSTPPPVVPQ TPSSTLRPTT PQTPVAATVP AAKSGAAPSS TFWTVCSACC
301: HIHQFDCQYE TCKLLCPSCR QPFVAKAMAE PPPIVPGTDM YYCTWGFFPV GFPGCPGFER MVNAQPSGVD QLNAPWLGSA GGVHGNAQNG VPPVSAPVVE
401: VPVKDPIEVP AVTPPAKPMR VKVGAKKRGR PKGSKNKKKL
001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.