Subcellular Localization
min:
: max
Winner_takes_all: cytosol, peroxisome, mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36712 | Sorghum | cytosol | 80.09 | 81.38 |
| Os07t0620200-01 | Rice | cytosol, mitochondrion, nucleus | 60.41 | 67.42 |
| TraesCS2A01G165100.1 | Wheat | cytosol | 53.85 | 60.87 |
| TraesCS2B01G191300.1 | Wheat | cytosol | 53.62 | 60.46 |
| TraesCS2D01G172200.1 | Wheat | cytosol | 53.17 | 60.1 |
| HORVU2Hr1G030250.2 | Barley | cytosol | 52.71 | 59.9 |
| Zm00001d047214_P001 | Maize | extracellular | 45.48 | 50.63 |
| Zm00001d029409_P001 | Maize | nucleus, peroxisome, plastid | 43.44 | 48.48 |
| GSMUA_Achr10P... | Banana | cytosol | 35.52 | 37.29 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 33.26 | 36.48 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 26.02 | 35.38 |
| Zm00001d030537_P001 | Maize | cytosol, nucleus, plastid | 14.71 | 32.99 |
| CDY21586 | Canola | cytosol | 18.78 | 28.72 |
| Bra009389.1-P | Field mustard | cytosol | 19.0 | 28.67 |
| CDY69792 | Canola | cytosol | 19.0 | 28.67 |
| AT5G09540.1 | Thale cress | nucleus | 18.1 | 28.57 |
| Zm00001d047043_P001 | Maize | nucleus | 25.34 | 25.87 |
| Bra031921.1-P | Field mustard | cytosol | 21.27 | 25.47 |
| CDY31322 | Canola | cytosol | 21.49 | 25.47 |
| KRH42098 | Soybean | nucleus | 25.57 | 24.84 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 26.47 | 24.07 |
| Zm00001d020762_P001 | Maize | nucleus | 23.53 | 23.64 |
| KRH49811 | Soybean | nucleus | 24.66 | 23.14 |
| AT5G64360.7 | Thale cress | nucleus | 22.62 | 21.55 |
| Bra024289.1-P | Field mustard | nucleus | 22.17 | 21.35 |
| KRH10601 | Soybean | nucleus | 23.98 | 21.33 |
| Solyc07g007230.2.1 | Tomato | nucleus | 20.14 | 20.89 |
| CDX84519 | Canola | nucleus | 21.49 | 20.0 |
| KRH21766 | Soybean | nucleus | 22.17 | 19.64 |
| CDY58269 | Canola | nucleus | 21.72 | 19.12 |
| PGSC0003DMT400079004 | Potato | cytosol | 20.81 | 18.0 |
| CDY46799 | Canola | nucleus | 15.61 | 17.6 |
| Solyc01g105780.2.1 | Tomato | nucleus | 25.11 | 15.48 |
| PGSC0003DMT400083794 | Potato | nucleus | 25.79 | 15.34 |
| Solyc11g006170.1.1 | Tomato | nucleus | 22.17 | 15.1 |
| PGSC0003DMT400073845 | Potato | cytosol | 21.72 | 14.72 |
| Solyc11g006140.1.1 | Tomato | nucleus | 18.55 | 13.78 |
| Bra027007.1-P | Field mustard | nucleus | 21.27 | 12.6 |
| CDY45473 | Canola | nucleus | 21.04 | 12.43 |
| CDY45966 | Canola | nucleus | 20.59 | 12.23 |
| AT1G62970.1 | Thale cress | nucleus | 20.59 | 11.42 |
Protein Annotations
| EnsemblPlants:Zm00001d022168_P001 | EnsemblPlants:Zm00001d022168_T001 | EnsemblPlantsGene:Zm00001d022168 | EntrezGene:100193564 | PANTHER:PTHR45496 | ProteinID:AAV64250.1 |
| ProteinID:ONM59707.1 | SEG:seg | UniParc:UPI00004C97E2 | UniProt:Q5GAN9 | MapMan:35.2 | : |
Description
AT hook-containing MAR binding 1-like protein
Coordinates
chr7:+:171557933..171559261
Molecular Weight (calculated)
46173.4 Da
IEP (calculated)
5.266
GRAVY (calculated)
-0.268
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFSGGGGGG RSRAEPARWL EIARKLLAAR DLVGCKRLAE RAVEADPYLP GADELLAVAD VLLASQRLLP SGRPDPVGVL QLQPAPGLDP AAAKRSFHRL
101: SQLVSSPRNP RPAADTALHF IQEAFADLSS NASADPPPAP APAAAPVPVP APAPAAPPAP VPAPAAAPSL IPAPAPVSGD ALASADGNAF WTVCPYCCHV
201: YQYQRALVGR ALRCQSAGCR RAFEATEIPN APPIVPGTDM YYCAWGFFPM GFPKAADLST NWRPFCPMFP GNSESPLQPA PAVTVNVDVQ NLENNGGTDV
301: QNVENNGIDD NSTPASVQPP GKSGDIDRAA GPSRGRMKKT TARKKVGAVS KKHSSSGVDS GIEPSMLGAD SLNGNAGSGQ TVGTREININ EVAMPTDSAT
401: MLNFGGDEDI RFDLDVDATD AILGNLHNLP FLREDGNNRR MF
101: SQLVSSPRNP RPAADTALHF IQEAFADLSS NASADPPPAP APAAAPVPVP APAPAAPPAP VPAPAAAPSL IPAPAPVSGD ALASADGNAF WTVCPYCCHV
201: YQYQRALVGR ALRCQSAGCR RAFEATEIPN APPIVPGTDM YYCAWGFFPM GFPKAADLST NWRPFCPMFP GNSESPLQPA PAVTVNVDVQ NLENNGGTDV
301: QNVENNGIDD NSTPASVQPP GKSGDIDRAA GPSRGRMKKT TARKKVGAVS KKHSSSGVDS GIEPSMLGAD SLNGNAGSGQ TVGTREININ EVAMPTDSAT
401: MLNFGGDEDI RFDLDVDATD AILGNLHNLP FLREDGNNRR MF
001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.