Subcellular Localization
min:
: max
Winner_takes_all: plastid, peroxisome, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047214_P001 | Maize | extracellular | 83.08 | 82.87 |
| EER92178 | Sorghum | nucleus | 80.3 | 78.91 |
| Os03t0392400-01 | Rice | nucleus | 67.68 | 66.17 |
| TraesCS4D01G156000.1 | Wheat | nucleus | 66.16 | 65.34 |
| HORVU4Hr1G039650.1 | Barley | nucleus | 65.4 | 65.08 |
| TraesCS4A01G160900.1 | Wheat | cytosol | 65.4 | 64.75 |
| TraesCS4B01G160100.1 | Wheat | cytosol | 64.65 | 63.84 |
| Zm00001d022168_P001 | Maize | cytosol, mitochondrion, peroxisome | 48.48 | 43.44 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 40.91 | 40.2 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 32.83 | 40.0 |
| GSMUA_Achr10P... | Banana | cytosol | 41.67 | 39.19 |
| Zm00001d030537_P001 | Maize | cytosol, nucleus, plastid | 16.41 | 32.99 |
| CDY21586 | Canola | cytosol | 23.23 | 31.83 |
| Bra009389.1-P | Field mustard | cytosol | 23.48 | 31.74 |
| CDY69792 | Canola | cytosol | 23.48 | 31.74 |
| AT5G09540.1 | Thale cress | nucleus | 20.96 | 29.64 |
| Bra031921.1-P | Field mustard | cytosol | 25.25 | 27.1 |
| CDY31322 | Canola | cytosol | 25.25 | 26.81 |
| Zm00001d047043_P001 | Maize | nucleus | 28.54 | 26.1 |
| Solyc07g007230.2.1 | Tomato | nucleus | 26.52 | 24.65 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 30.05 | 24.49 |
| AT5G64360.7 | Thale cress | nucleus | 27.53 | 23.49 |
| KRH42098 | Soybean | nucleus | 26.52 | 23.08 |
| KRH49811 | Soybean | nucleus | 26.77 | 22.51 |
| Bra024289.1-P | Field mustard | nucleus | 26.01 | 22.44 |
| CDX84519 | Canola | nucleus | 26.77 | 22.32 |
| Zm00001d020762_P001 | Maize | nucleus | 24.49 | 22.05 |
| KRH10601 | Soybean | nucleus | 26.52 | 21.13 |
| CDY58269 | Canola | nucleus | 26.01 | 20.52 |
| KRH21766 | Soybean | nucleus | 25.51 | 20.24 |
| PGSC0003DMT400079004 | Potato | cytosol | 26.01 | 20.16 |
| CDY46799 | Canola | nucleus | 17.42 | 17.6 |
| Solyc11g006170.1.1 | Tomato | nucleus | 26.52 | 16.18 |
| Solyc01g105780.2.1 | Tomato | nucleus | 29.29 | 16.18 |
| PGSC0003DMT400073845 | Potato | cytosol | 26.01 | 15.8 |
| PGSC0003DMT400083794 | Potato | nucleus | 29.29 | 15.61 |
| Solyc11g006140.1.1 | Tomato | nucleus | 22.73 | 15.13 |
| CDY45966 | Canola | nucleus | 22.73 | 12.1 |
| Bra027007.1-P | Field mustard | nucleus | 22.73 | 12.06 |
| CDY45473 | Canola | nucleus | 22.47 | 11.9 |
| AT1G62970.1 | Thale cress | nucleus | 23.23 | 11.54 |
Protein Annotations
| Gene3D:1.10.287.110 | EntrezGene:100276130 | MapMan:35.2 | UniProt:A0A1D6K4Y6 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | ProteinID:ONL98664.1 | PFscan:PS50076 | PANTHER:PTHR45496 | SMART:SM00271 |
| SUPFAM:SSF46565 | UniParc:UPI0002213FA0 | EnsemblPlantsGene:Zm00001d029409 | EnsemblPlants:Zm00001d029409_P001 | EnsemblPlants:Zm00001d029409_T001 | SEG:seg |
Description
Chaperone DnaJ-domain superfamily protein
Coordinates
chr1:-:69302141..69303331
Molecular Weight (calculated)
41737.2 Da
IEP (calculated)
6.990
GRAVY (calculated)
-0.327
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFSTGGSVS GGGGGASDGP AQAERWLEIA EKLLAARDLV GCKRFAERSV EANPLLAGVD ELLAVADVLL ASQFMGTSGQ PDPLAILQLP PGVSPDQAAV
101: SRAFRRLALL LGPSNPHPGA EMALRLVNDA YAFLSDPSRR PPPPADPATG TPYSSQYPAA AAPASDTPEF WTACPFCCYV HQYPRSLIGR ALKCPNAGCR
201: RGFVASELPT PPTVVPGTEM YHCAWGFFPL GFPNAADLGA NWKPFYKMFP WNTAPSGQGG GGRSHGNHGG RQPQNDSARG GSSRGRIKKT TARKKVGVGL
301: RRRSLGVESG IDSSMLGQEG WAGDENAGDG RAEEVRRINI NEAAHATDGT GRVNVSGAGG VEDIGNFHID VDASEDILGN LHNMHFLRVD NLGRMI
101: SRAFRRLALL LGPSNPHPGA EMALRLVNDA YAFLSDPSRR PPPPADPATG TPYSSQYPAA AAPASDTPEF WTACPFCCYV HQYPRSLIGR ALKCPNAGCR
201: RGFVASELPT PPTVVPGTEM YHCAWGFFPL GFPNAADLGA NWKPFYKMFP WNTAPSGQGG GGRSHGNHGG RQPQNDSARG GSSRGRIKKT TARKKVGVGL
301: RRRSLGVESG IDSSMLGQEG WAGDENAGDG RAEEVRRINI NEAAHATDGT GRVNVSGAGG VEDIGNFHID VDASEDILGN LHNMHFLRVD NLGRMI
001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.