Factsheet for Zm00001d035113_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24287	Sorghum	nucleus	68.26	73.33
Zm00001d017507_P001	Maize	nucleus	43.68	68.93
Zm00001d017505_P003	Maize	plastid	86.4	63.73
HORVU6Hr1G080290.6	Barley	nucleus	18.5	58.71
TraesCS6B01G361300.1	Wheat	nucleus	18.02	56.77
TraesCS6D01G309500.4	Wheat	nucleus	17.78	56.02
OQU75762	Sorghum	nucleus	44.27	45.97
TraesCS1B01G326700.2	Wheat	nucleus	42.24	44.92
TraesCS1A01G314400.2	Wheat	nucleus	41.41	44.04
TraesCS1D01G314900.1	Wheat	nucleus	41.41	44.04
HORVU1Hr1G067100.2	Barley	nucleus	41.29	43.96
Os03t0840500-00	Rice	cytosol, nucleus	16.83	33.02
Bra033600.1-P	Field mustard	endoplasmic reticulum	9.9	26.6
GSMUA_Achr2P23110_001	Banana	nucleus	4.53	26.57
TraesCS6A01G330400.1	Wheat	nucleus, plastid	15.75	26.24
CDY56766	Canola	nucleus	14.56	22.76
CDY12124	Canola	nucleus	14.08	20.03
CDX90315	Canola	nucleus	14.08	19.93
CDX72715	Canola	nucleus	12.29	19.85
Bra010701.1-P	Field mustard	nucleus	13.84	19.66
CDX87111	Canola	nucleus	12.29	19.07
AT4G39160.2	Thale cress	nucleus	13.72	18.43
CDY16866	Canola	vacuole	11.69	18.01
KRG92007	Soybean	nucleus	10.5	16.96
KRH34776	Soybean	nucleus	9.79	16.47
Solyc02g081640.2.1	Tomato	nucleus	13.01	15.46
PGSC0003DMT400045728	Potato	nucleus	13.13	15.41
VIT_03s0038g04460.t01	Wine grape	nucleus	18.62	14.81
KRH27726	Soybean	nucleus	14.08	12.45
KRH77688	Soybean	nucleus	13.37	11.98

Protein Annotations

Gene3D:1.20.58.1880	MapMan:15.4.3.2	MapMan:15.5.2.2	UniProt:A0A1D6LEI6	ProteinID:AQK78368.1	GO:GO:0000126
GO:GO:0001026	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006359	GO:GO:0006383
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	PFAM:PF15963
PANTHER:PTHR22929	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	InterPro:TFIIIB_B''	UniParc:UPI0008459DFB
EnsemblPlantsGene:Zm00001d035113	EnsemblPlants:Zm00001d035113_P001	EnsemblPlants:Zm00001d035113_T001	SEG:seg	:	:

Description

Homeodomain-like superfamily protein

Coordinates

chr6:-:5768605..5775661

Molecular Weight (calculated)

93587.5 Da

IEP (calculated)

5.016

GRAVY (calculated)

-0.902

Length

838 amino acids

Sequence
(BLAST)

001: MIDDEANFGN ILDASEEVQV TAKFRPKERP KPRKTALSSR SAAPNPTEET GDRKVGTFNQ VNSSKELTCQ ERTSLMCPST ESVDIIAGSQ GILDTPLEDA
101: LAVPQGSLPG ASAAGRTSQY GEHNDDPSKL ATHQENLVVS DINVPPNSSC GKAIDDIVEF EDMCDVQIEE ERVTKFQPKA QTKLLKEIAK SRKTNQKVET
201: STVDVVTQNG KGNNIQTRLH GNQVQDPKSH ESVQIPDSEE LLATDNSKGC NLAKLNNVLE ESVQEETIAK FRSDLQPKPR KASSHVAAIK INVAAVAPIV
301: GVCDSNNDMY REPKDQETIT GPVVWSPQAV HADVDLDNHN EPINPPIDGT QSMIGEVPST AFTGREKGKS KSVSFALSDA SGVATPIDTN SEMGNIGDSC
401: SDKLTDENLS NSSRHIAEKV SIDVMIYIYM ATTRFLLNLV LFPFFQHSIT KDQYSNGQDH EREPLDHAVQ QQPKSDVGER ASSMKRRCRK KVQKVGTPNH
501: TVDDYFGEDC VEPSLAEEDN NTGDDYTTGN NHKARKKSRG GVEESQQQKV QKNKSKVSSR GRKRTLKDET AEKPEKKLTH RIRQRITKEV KALLETPREQ
601: IKPMKLSASH LRLLQEARER VNPKGIPSGP SSNTRNFQLD DMDDLGYRDE EDRFFDNDTT EEHVQNATKL NYHSYMNKPA RGRWSKSDTD LFYEGLRQIG
701: SDFAMIQQLF PDKTRHQVRQ KFKSEERKNP LLVHDAITHR SGDNLYFKKV IKQLNIEDVV LPDIKSTQKQ DGASSERGPG NENVLDDLYG EENSSNWLNE
801: EHDVQMADVE EEHGEQMDDV DLGNDGGDDD LGDVFDWY

Best Arabidopsis Sequence Match ( AT4G39160.1 )
(BLAST)

001: MDLDFDDQPS DHAAPAVRAG ARFKPKGRPQ PKKKQVSLST TQTTLSPDVA QEKLSTQSED LVPLDGSSEI PSNALPSETN VPDSGSINKS TIGTLSEENE
101: DAFPRGVHWS VKPSILRACN NVNLVGNRRD DGIEATTSFP DDPRTQDSAI FGDYVTPETG ADEGRVDMET LDIVQEEGTT SSYVQHTGKL QPKPRLLETV
201: VEEPEPHYSA GDTGYFPMGT NESEFMANVE SRNGFSTYED LQEEELNIPE APRETVGEME AQNASGGWEQ EEQGVSPCIN NTVTGEEENC MGNTVEEQSK
301: RESKTGKSKR ATSRKRKKTS EEPNKSSEKT EQKKFKHSSR RQKRTLEKEL LETPDHEIRS LPLRDMLRLV EYKEWMQKKE AKGAGVQPSQ ESNNMNGSGS
401: QYHSQGFDEE DEFGDFGIES SEYQENNVVK PDSPVNYQTY MNKTSRTRWS KEDTELFYEG IQEFGSNLSM IQQLFPERTR EQMKLKFKLE ERRNPLKLND
501: ALSSRSKHFT HFKNVIKKLQ QEAAAAKEGE EEEEAGAEAE TTDVPENEEP EKSEETERAS DGVAAGVKES DGGDVENGVR SDGGDECDDD EDFWNSYKSD
601: M

Arabidopsis Description

Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JVA4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.