Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19725 | Sorghum | nucleus | 90.17 | 92.58 |
| Zm00001d010646_P001 | Maize | plastid | 86.85 | 92.18 |
| Os05t0490700-01 | Rice | extracellular | 80.35 | 82.74 |
| TraesCS1B01G378900.1 | Wheat | nucleus | 79.34 | 81.45 |
| TraesCS1D01G366800.1 | Wheat | nucleus | 79.48 | 81.36 |
| TraesCS1A01G362000.1 | Wheat | nucleus | 79.34 | 81.21 |
| HORVU1Hr1G068460.1 | Barley | nucleus | 78.03 | 80.12 |
| TraesCS1B01G319000.1 | Wheat | nucleus | 77.89 | 79.97 |
| TraesCS1D01G307700.1 | Wheat | nucleus | 77.46 | 79.53 |
| TraesCS1A01G308300.1 | Wheat | nucleus | 76.88 | 78.93 |
| HORVU0Hr1G001190.1 | Barley | nucleus | 78.47 | 76.05 |
| Zm00001d043135_P003 | Maize | nucleus | 68.06 | 60.46 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 6.36 | 57.89 |
| Bra009408.1-P | Field mustard | nucleus | 36.85 | 49.8 |
| KRH56252 | Soybean | nucleus | 14.6 | 47.42 |
| Zm00001d041005_P001 | Maize | nucleus | 47.4 | 46.92 |
| Bra028776.1-P | Field mustard | nucleus | 40.9 | 44.57 |
| Bra005829.1-P | Field mustard | nucleus | 41.47 | 44.5 |
| CDY11319 | Canola | nucleus | 41.47 | 44.5 |
| CDX80930 | Canola | nucleus | 41.19 | 44.25 |
| Solyc09g082050.2.1 | Tomato | nucleus | 40.61 | 43.43 |
| AT1G73100.1 | Thale cress | nucleus | 41.91 | 43.35 |
| CDY11129 | Canola | nucleus | 41.76 | 43.2 |
| VIT_13s0047g00120.t01 | Wine grape | nucleus | 44.65 | 43.16 |
| AT5G04940.2 | Thale cress | nucleus | 41.76 | 43.13 |
| CDX68245 | Canola | nucleus | 41.47 | 43.09 |
| CDX98805 | Canola | nucleus | 40.75 | 43.05 |
| CDY61331 | Canola | nucleus | 41.62 | 43.05 |
| KRH13229 | Soybean | nucleus | 41.76 | 42.94 |
| KRH62706 | Soybean | nucleus | 41.33 | 42.88 |
| KRH66648 | Soybean | nucleus | 43.64 | 42.66 |
| KRH20576 | Soybean | nucleus | 41.47 | 42.64 |
| PGSC0003DMT400077329 | Potato | nucleus | 41.19 | 42.47 |
| Bra009409.1-P | Field mustard | nucleus | 40.61 | 42.26 |
| CDY59935 | Canola | nucleus | 40.03 | 42.03 |
| Zm00001d019195_P001 | Maize | nucleus | 51.88 | 41.94 |
| CDX96449 | Canola | nucleus | 39.74 | 41.86 |
| Bra016018.1-P | Field mustard | nucleus | 40.03 | 40.92 |
| AT2G05900.1 | Thale cress | cytoskeleton, cytosol, nucleus | 18.35 | 40.71 |
| CDX98804 | Canola | nucleus | 35.98 | 40.62 |
| Solyc10g077070.1.1 | Tomato | nucleus | 40.9 | 39.64 |
| VIT_08s0040g00360.t01 | Wine grape | nucleus | 41.91 | 39.35 |
| PGSC0003DMT400018512 | Potato | nucleus | 40.75 | 39.28 |
| CDY14135 | Canola | nucleus | 40.9 | 39.2 |
| KRG95012 | Soybean | plastid | 27.02 | 38.32 |
| AT1G17770.1 | Thale cress | nucleus | 35.26 | 35.21 |
| CDY26218 | Canola | nucleus | 33.67 | 33.38 |
| CDY66122 | Canola | nucleus | 33.38 | 32.35 |
| AT2G24740.1 | Thale cress | nucleus | 33.81 | 30.99 |
| CDY56214 | Canola | nucleus | 33.67 | 29.38 |
| Zm00001d031858_P001 | Maize | nucleus | 27.17 | 28.83 |
| CDX70182 | Canola | nucleus | 40.75 | 27.87 |
| Zm00001d042272_P003 | Maize | nucleus | 26.01 | 26.79 |
| Zm00001d006369_P002 | Maize | nucleus | 13.01 | 26.55 |
| Bra025949.1-P | Field mustard | nucleus | 33.67 | 26.09 |
| CDY26221 | Canola | nucleus | 33.38 | 25.81 |
| Bra004258.1-P | Field mustard | nucleus | 33.81 | 25.46 |
| Zm00001d005445_P001 | Maize | nucleus | 20.38 | 24.69 |
| Zm00001d011956_P002 | Maize | mitochondrion, nucleus, plastid | 23.84 | 22.66 |
| Zm00001d019520_P001 | Maize | nucleus | 20.38 | 21.46 |
| Zm00001d051126_P004 | Maize | nucleus | 13.29 | 18.15 |
| Zm00001d032343_P001 | Maize | plastid | 27.31 | 17.09 |
| Zm00001d005650_P001 | Maize | plastid | 30.64 | 16.3 |
| Zm00001d049884_P006 | Maize | nucleus | 16.76 | 15.61 |
| Zm00001d050267_P001 | Maize | peroxisome | 13.29 | 15.51 |
| Zm00001d031851_P002 | Maize | nucleus | 16.04 | 14.9 |
| CDY01852 | Canola | plasma membrane | 34.97 | 13.04 |
| Zm00001d002938_P001 | Maize | nucleus | 12.43 | 12.1 |
| Zm00001d017798_P002 | Maize | nucleus | 14.88 | 6.9 |
| Zm00001d051590_P001 | Maize | nucleus | 11.71 | 5.38 |
| Zm00001d044165_P001 | Maize | nucleus | 1.01 | 2.3 |
| CDX89821 | Canola | cytosol | 0.0 | 0.0 |
| CDY21127 | Canola | cytosol | 0.0 | 0.0 |
| CDX86631 | Canola | cytosol | 0.0 | 0.0 |
| CDY53193 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.7 | MapMan:12.5.1.16.1 | Gene3D:2.170.270.10 | Gene3D:2.30.280.10 | UniProt:A0A1D6M742 |
| ProteinID:AQK86883.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016571 |
| GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | GO:GO:0032259 | GO:GO:0034968 | InterPro:Hist-Lys_N-MeTrfase_plant |
| InterPro:IPR001214 | InterPro:IPR003105 | InterPro:IPR003616 | InterPro:IPR007728 | InterPro:IPR025794 | InterPro:IPR036987 |
| PFAM:PF00856 | PFAM:PF02182 | PFAM:PF05033 | PFscan:PS50280 | PFscan:PS50867 | PFscan:PS50868 |
| PFscan:PS51015 | PFscan:PS51575 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF372 | InterPro:PUA-like_sf | InterPro:Post-SET_dom |
| InterPro:Pre-SET_dom | InterPro:SET_dom | SMART:SM00317 | SMART:SM00466 | SMART:SM00468 | InterPro:SRA-YDG_sf |
| InterPro:SRA_YDG | SUPFAM:SSF82199 | SUPFAM:SSF88697 | UniParc:UPI0008440C56 | EnsemblPlantsGene:Zm00001d038541 | EnsemblPlants:Zm00001d038541_P002 |
| EnsemblPlants:Zm00001d038541_T002 | SEG:seg | : | : | : | : |
Description
set domain gene111Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH3
Coordinates
chr6:-:159603966..159608236
Molecular Weight (calculated)
76292.3 Da
IEP (calculated)
7.840
GRAVY (calculated)
-0.477
Length
692 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQWSNALRS MDFFCTSKMY RASNFIPDPN QVLLDAKPLR SLAPMFPAPM GVNVNQSSTP PLVCVTPVGQ FSAGFGAGNL PAFGSFTTFS ATSNGVSYAG
101: TSANGAIDAT PISAYKTRSN ISLDGDDDPY SGNQTERKPR RGRPPGSGRD GSNGKLKRPK PTYKNFVAGK ELAFLAASSD PRDIVEAVHM TFEALRRRHL
201: QMDETQDASR RADLKAGAIM MASNIRANSG KRVGTVPGVE IGDIFYFRME LCVIGLHAPS MGGIDYMTSK FGNDEDSVAI CIVSAGGYEN DDDDTDVLVY
301: SGQGGNSRNT EERQDQKLER GNLALERSLH RKNEIRVVRG FKDPFCLTGK IYIYDGLYKI HESWKEKTRS GINCFKYKLL REPGQRDGAA LWKMTQKWID
401: DPATRGRVLL ADLSSKAETI PVSLVNEVDH EKGPAHFTYT NQVKYVRPLS SMKKLQGCGC QSVCLPGDAS CACGQHNGGD LPYSSLGLLS CRKPMIYECG
501: ESCNCSTNCR NRVTQKGPRL HFEVFRTTNR GWGLRCWEPV RAGSFICEYA GEVIDELKVN LNDTEDDYIF QTVCPGEKTL KWNCGPELLG EASTYVSADE
601: FEPLPIKISA KNMGNVSRFM NHSCSPNVFW QPVQYDHGDD GHPHIMFFAL KHIPPMTELT YDYGVAGAES SGSGSRRTKN CMCGSQNCRG LF
101: TSANGAIDAT PISAYKTRSN ISLDGDDDPY SGNQTERKPR RGRPPGSGRD GSNGKLKRPK PTYKNFVAGK ELAFLAASSD PRDIVEAVHM TFEALRRRHL
201: QMDETQDASR RADLKAGAIM MASNIRANSG KRVGTVPGVE IGDIFYFRME LCVIGLHAPS MGGIDYMTSK FGNDEDSVAI CIVSAGGYEN DDDDTDVLVY
301: SGQGGNSRNT EERQDQKLER GNLALERSLH RKNEIRVVRG FKDPFCLTGK IYIYDGLYKI HESWKEKTRS GINCFKYKLL REPGQRDGAA LWKMTQKWID
401: DPATRGRVLL ADLSSKAETI PVSLVNEVDH EKGPAHFTYT NQVKYVRPLS SMKKLQGCGC QSVCLPGDAS CACGQHNGGD LPYSSLGLLS CRKPMIYECG
501: ESCNCSTNCR NRVTQKGPRL HFEVFRTTNR GWGLRCWEPV RAGSFICEYA GEVIDELKVN LNDTEDDYIF QTVCPGEKTL KWNCGPELLG EASTYVSADE
601: FEPLPIKISA KNMGNVSRFM NHSCSPNVFW QPVQYDHGDD GHPHIMFFAL KHIPPMTELT YDYGVAGAES SGSGSRRTKN CMCGSQNCRG LF
001: MQGVPGFNTV PNPNHYDKSI VLDIKPLRSL KPVFPNGNQG PPFVGCPPFG PSSSEYSSFF PFGAQQPTHD TPDLNQTQNT PIPSFVPPLR SYRTPTKTNG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
Arabidopsis Description
SUVH3Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.