Factsheet for Zm00001d041005_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d020762_P001
Zm00001d022168_P001
Zm00001d029409_P001
Zm00001d047043_P001
Zm00001d047214_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73100.1	Zm00001d020762_P001	AT5G09540.1	21798944
AT1G73100.1	Zm00001d022168_P001	AT5G09540.1	21798944
AT1G73100.1	Zm00001d029409_P001	AT5G09540.1	21798944
AT1G73100.1	Zm00001d047043_P001	AT5G09540.1	21798944
AT1G73100.1	Zm00001d047214_P001	AT5G09540.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78645	Sorghum	nucleus	71.39	66.89
Os12t0128450-00	Rice	nucleus	55.79	63.52
Os11t0131600-00	Rice	nucleus	59.94	63.1
TraesCS5A01G140500.1	Wheat	nucleus	56.22	57.62
HORVU5Hr1G045170.2	Barley	nucleus, plastid	49.36	57.4
TraesCS5D01G152000.1	Wheat	nucleus	55.79	56.69
TraesCS5B01G138800.1	Wheat	nucleus	56.51	55.63
CDY04931	Canola	cytosol, extracellular, nucleus	5.87	53.95
Zm00001d010646_P001	Maize	plastid	45.21	48.47
Zm00001d038541_P002	Maize	nucleus	46.92	47.4
Bra009408.1-P	Field mustard	nucleus	34.33	46.88
GSMUA_Achr5P27620_001	Banana	nucleus	39.06	44.17
Bra028776.1-P	Field mustard	nucleus	39.2	43.15
KRH56252	Soybean	nucleus	12.88	42.25
CDY11319	Canola	nucleus	38.77	42.02
Bra005829.1-P	Field mustard	nucleus	38.63	41.86
CDX80930	Canola	nucleus	38.34	41.61
Zm00001d043135_P003	Maize	nucleus	45.78	41.08
Solyc09g082050.2.1	Tomato	nucleus	37.34	40.34
KRH62706	Soybean	nucleus	38.48	40.33
CDX98805	Canola	nucleus	37.77	40.31
Bra009409.1-P	Field mustard	nucleus	38.34	40.3
AT5G04940.2	Thale cress	nucleus	38.05	39.7
KRH20576	Soybean	nucleus	38.05	39.52
PGSC0003DMT400077329	Potato	nucleus	37.77	39.34
AT2G05900.1	Thale cress	cytoskeleton, cytosol, nucleus	17.45	39.1
KRH13229	Soybean	nucleus	37.48	38.93
VIT_13s0047g00120.t01	Wine grape	nucleus	39.77	38.83
CDX68245	Canola	nucleus	36.91	38.74
CDX96449	Canola	nucleus	36.19	38.51
KRH66648	Soybean	nucleus	38.91	38.42
CDY11129	Canola	nucleus	36.77	38.42
CDY61331	Canola	nucleus	36.77	38.42
AT1G73100.1	Thale cress	nucleus	36.62	38.27
CDY14135	Canola	nucleus	39.48	38.23
VIT_08s0040g00360.t01	Wine grape	nucleus	40.2	38.13
Solyc10g077070.1.1	Tomato	nucleus	38.77	37.96
CDX98804	Canola	nucleus	33.19	37.85
CDY59935	Canola	nucleus	35.62	37.78
PGSC0003DMT400018512	Potato	nucleus	38.63	37.6
Zm00001d019195_P001	Maize	nucleus	45.78	37.38
Bra016018.1-P	Field mustard	nucleus	36.19	37.37
KRG95012	Soybean	plastid	24.61	35.25
CDY26218	Canola	nucleus	31.76	31.81
AT1G17770.1	Thale cress	nucleus	31.33	31.6
CDY66122	Canola	nucleus	32.19	31.51
Zm00001d031858_P001	Maize	nucleus	28.61	30.67
AT2G24740.1	Thale cress	nucleus	30.76	28.48
CDY56214	Canola	nucleus	31.47	27.74
Zm00001d006369_P002	Maize	nucleus	13.3	27.43
Zm00001d042272_P003	Maize	nucleus	26.18	27.23
CDX70182	Canola	nucleus	38.2	26.38
Zm00001d005445_P001	Maize	nucleus	21.32	26.09
Bra025949.1-P	Field mustard	nucleus	32.05	25.08
CDY26221	Canola	nucleus	32.05	25.03
Bra004258.1-P	Field mustard	nucleus	31.9	24.27
Zm00001d011956_P002	Maize	mitochondrion, nucleus, plastid	24.75	23.76
Zm00001d019520_P001	Maize	nucleus	20.74	22.07
Zm00001d051126_P004	Maize	nucleus	13.02	17.95
Zm00001d032343_P001	Maize	plastid	25.61	16.18
Zm00001d005650_P001	Maize	plastid	29.04	15.6
Zm00001d050267_P001	Maize	peroxisome	12.73	15.01
Zm00001d049884_P006	Maize	nucleus	15.16	14.27
Zm00001d031851_P002	Maize	nucleus	14.88	13.96
CDY01852	Canola	plasma membrane	33.05	12.45
Zm00001d002938_P001	Maize	nucleus	12.3	12.1
Zm00001d017798_P002	Maize	nucleus	14.59	6.83
Zm00001d051590_P001	Maize	nucleus	11.73	5.44
Zm00001d044165_P001	Maize	nucleus	0.72	1.64
CDX86631	Canola	cytosol	0.0	0.0
CDX89821	Canola	cytosol	0.0	0.0
CDY21127	Canola	cytosol	0.0	0.0
CDY53193	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	UniProt:A0A1D6MTR0
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740
GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214
InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	ProteinID:ONM32275.1
PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868
PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF369	InterPro:PUA-like_sf	InterPro:Post-SET_dom
InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf
InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI000221CE24	EnsemblPlantsGene:Zm00001d041005	EnsemblPlants:Zm00001d041005_P001
EnsemblPlants:Zm00001d041005_T001	SEG:seg	:	:	:	:

Description

Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH3

Coordinates

chr3:-:89725408..89727507

Molecular Weight (calculated)

77158.1 Da

IEP (calculated)

7.409

GRAVY (calculated)

-0.539

Length

699 amino acids

Sequence
(BLAST)

001: METTSQDESE SDEQDQPLEA KPLRSLAPML PLPMKYDVAT QSTDPMLVFV TPFRPCTSPE PSAARQPLPK SPAPLRATPV SAAFPMPRPG AGGDPLEATP
101: VSAAAPAFRM PRREDESSEE EYNPFFCGRK KPTRLKTAGK RTHQQAECSN ARDMKRRPTQ TSLSLNKELA TFTPSSSSDP TESVQETLTM FDSLRRRILQ
201: LDENREDAAG KRADLKAGSL MMQNGLRINN LKTVGPVPGV EVGDIFFFRM EMCVVGLHAP AMAGIDYVSA RRGGSGTDEV VAVSVVSSGG YENDDTDSDV
301: LVYTGQGGSS RRRKDKHDQR LERGNLALMN SMERRSVVRV VRGAQDPFCR SSKIYVYDGL YRVEGSWTER ARDGFSVFKY KLRREPGQRD GISVWKMAER
401: WRADPVTRSH VVSADMSSSA EKLPVCLVND ADDDDEQRVP GRFNYVTGVE YEYPRPLGKT KPCKCPSVCL PSDDPDCSCA RLNSGHLPYT ACGLLVKRVP
501: VLYECGPECR CSGNCRNRVA QKGVRLRFEV FWTGDACGWG VRSWDPIRAG AFVCEYAGQA VDVSTGGEED EYAFCASGEG WRWWNLGAGL VEEASDGDAA
601: ENLEERLPVM ISARRSGNVA RFLNHSCSPN LLWQPVRYGD GGYPHVMFFA MRHVPPMAQL TYDYGTTRGA APPGFQGKFP NACRLKPCFC GSTSCRGSF

Best Arabidopsis Sequence Match ( AT1G17770.1 )
(BLAST)

001: MDKSIPIKAI PVACVRPDLV DDVTKNTSTI PTMVSPVLTN MPSATSPLLM VPPLRTIWPS NKEWYDGDAG PSSTGPIKRE ASDNTNDTAH NTFAPPPEMV
101: IPLITIRPSD DSSNYSCDAG AGPSTGPVKR GRGRPKGSKN STPTEPKKPK VYDPNSLKVT SRGNFDSEIT EAETETGNQE IVDSVMMRFD AVRRRLCQIN
201: HPEDILTTAS GNCTKMGVKT NTRRRIGAVP GIHVGDIFYY WGEMCLVGLH KSNYGGIDFF TAAESAVEGH AAMCVVTAGQ YDGETEGLDT LIYSGQGGTD
301: VYGNARDQEM KGGNLALEAS VSKGNDVRVV RGVIHPHENN QKIYIYDGMY LVSKFWTVTG KSGFKEFRFK LVRKPNQPPA YAIWKTVENL RNHDLIDSRQ
401: GFILEDLSFG AELLRVPLVN EVDEDDKTIP EDFDYIPSQC HSGMMTHEFH FDRQSLGCQN CRHQPCMHQN CTCVQRNGDL LPYHNNILVC RKPLIYECGG
501: SCPCPDHCPT RLVQTGLKLH LEVFKTRNCG WGLRSWDPIR AGTFICEFAG LRKTKEEVEE DDDYLFDTSK IYQRFRWNYE PELLLEDSWE QVSEFINLPT
601: QVLISAKEKG NVGRFMNHSC SPNVFWQPIE YENRGDVYLL IGLFAMKHIP PMTELTYDYG VSCVERSEED EVLLYKGKKT CLCGSVKCRG SFT

Arabidopsis Description

SUVH7Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.