Factsheet for Zm00001d042272_P003

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88147	Sorghum	nucleus	92.26	89.34
Os01t0927000-01	Rice	nucleus	80.8	81.9
TraesCS3D01G433900.1	Wheat	nucleus	78.72	76.67
TraesCS3B01G475200.1	Wheat	nucleus	74.7	76.41
TraesCS3A01G441200.1	Wheat	nucleus	78.12	76.09
Zm00001d011956_P002	Maize	mitochondrion, nucleus, plastid	79.91	73.76
HORVU3Hr1G096250.8	Barley	golgi, mitochondrion, nucleus, plastid	77.98	68.41
GSMUA_Achr8P00500_001	Banana	extracellular	26.34	64.84
VIT_14s0068g01090.t01	Wine grape	nucleus	48.36	61.9
KRG94709	Soybean	nucleus	25.3	56.48
GSMUA_Achr8P00490_001	Banana	nucleus	29.17	54.14
CDX70530	Canola	nucleus	48.07	53.57
Bra006226.1-P	Field mustard	nucleus	47.62	53.51
CDX78549	Canola	nucleus	47.77	53.15
AT5G13960.1	Thale cress	nucleus	48.51	52.24
Solyc02g094520.2.1	Tomato	nucleus	52.23	51.85
KRH20251	Soybean	nucleus, plastid	50.15	50.91
KRH06819	Soybean	nucleus	51.93	48.47
Zm00001d010646_P001	Maize	plastid	26.49	27.3
Zm00001d031858_P001	Maize	nucleus	25.45	26.23
Zm00001d041005_P001	Maize	nucleus	27.23	26.18
Zm00001d038541_P002	Maize	nucleus	26.79	26.01
Zm00001d006369_P002	Maize	nucleus	12.5	24.78
Zm00001d043135_P003	Maize	nucleus	27.23	23.49
Zm00001d019195_P001	Maize	nucleus	27.83	21.85
Zm00001d005445_P001	Maize	nucleus	18.45	21.72
Zm00001d019520_P001	Maize	nucleus	18.75	19.18
Zm00001d032343_P001	Maize	plastid	29.17	17.72
Zm00001d051126_P004	Maize	nucleus	12.95	17.16
Zm00001d005650_P001	Maize	plastid	30.06	15.53
Zm00001d049884_P006	Maize	nucleus	16.07	14.54
Zm00001d050267_P001	Maize	peroxisome	12.5	14.17
Zm00001d031851_P002	Maize	nucleus	15.62	14.09
Zm00001d002938_P001	Maize	nucleus	13.69	12.94
Zm00001d017798_P002	Maize	nucleus	15.48	6.97
Zm00001d051590_P001	Maize	nucleus	11.16	4.98
Zm00001d044165_P001	Maize	nucleus	1.34	2.96

Protein Annotations

KEGG:00310+2.1.1.43	EntrezGene:100383674	MapMan:12.3.3.7	Gene3D:2.30.280.10	UniProt:A0A1D6N2J4	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740
GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214
InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	ProteinID:ONM34934.1
ProteinID:ONM34935.1	ProteinID:ONM34938.1	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280
PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF390
InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466
SMART:SM00468	SMART:SM00508	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697
UniParc:UPI000844BE23	EnsemblPlantsGene:Zm00001d042272	EnsemblPlants:Zm00001d042272_P003	EnsemblPlants:Zm00001d042272_T003	SEG:seg	:

Description

Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH4

Coordinates

chr3:-:158433826..158447664

Molecular Weight (calculated)

74174.5 Da

IEP (calculated)

8.292

GRAVY (calculated)

-0.546

Length

672 amino acids

Sequence
(BLAST)

001: MDASPLNPPP LVEEELVLRR SARCLNRPTR PSYAEQEPPK KPGGRGRSKR KRDEEKPELA PAQQGAKSPD RKDSKDEAGE KKPTPMIAAL PVSCAGVAAE
101: DDATGTGKSA KLRVKETLRA FNSHYLHFVQ EEQKRAQAAL QEINAKSGLK RQTKGGEKKR PSKRPDLKAI TKMQEMNAVL YPEKTIGHLP GIDVGDHFYS
201: RAEMVVLGIH SHWLNGIDFM GLKYQGKEYS NLTFPLATCI VMSGVYEDDL DKADEIIYTG QGGNDLLGNH RQIGSQQLKR GNLALKNSRE NGNPVRVVRG
301: HLSKNSYTGK IYTYDGLYKV VDDWVQKGVQ GHVVFKFKLK RLEGQPSLTT SEVRFTRAEA PTTISELPGL VCDDISGGQE NIPIPATNLV DDPPVPPSGF
401: KYLKSLQIPK DIKIPSSIIG CDCEGGCASN KKCLCAQRNG SDLPYVSYKN IGRLVEPKAV VFECGANCSC NHDCVNRTSQ QGLQYRLEVG IPLSKSVEVF
501: KTASKGWGVR TWDTILPGAP ICEYTGVLRR TEDLDGSQNN YCFDIDCLQT MKGLDGREKR AGSEMHLPNL HPENDSDAQP APEYCIDAHS IGNFARFINH
601: SCQPNLFVQC VLSSHNDVKL AKVMLFAADT ILPLQELSYD YGYRLDSVVG PDGKIVKLAC HCGAPDCRKR LY

Best Arabidopsis Sequence Match ( AT5G13960.1 )
(BLAST)

001: MAGKRKRANA PDQTERRSSV RVQKVRQKAL DEKARLVQER VKLLSDRKSE ICVDDTELHE KEEENVDGSP KRRSPPKLTA MQKGKQKLSV SLNGKDVNLE
101: PHLKVTKCLR LFNKQYLLCV QAKLSRPDLK GVTEMIKAKA ILYPRKIIGD LPGIDVGHRF FSRAEMCAVG FHNHWLNGID YMSMEYEKEY SNYKLPLAVS
201: IVMSGQYEDD LDNADTVTYT GQGGHNLTGN KRQIKDQLLE RGNLALKHCC EYNVPVRVTR GHNCKSSYTK RVYTYDGLYK VEKFWAQKGV SGFTVYKYRL
301: KRLEGQPELT TDQVNFVAGR IPTSTSEIEG LVCEDISGGL EFKGIPATNR VDDSPVSPTS GFTYIKSLII EPNVIIPKSS TGCNCRGSCT DSKKCACAKL
401: NGGNFPYVDL NDGRLIESRD VVFECGPHCG CGPKCVNRTS QKRLRFNLEV FRSAKKGWAV RSWEYIPAGS PVCEYIGVVR RTADVDTISD NEYIFEIDCQ
501: QTMQGLGGRQ RRLRDVAVPM NNGVSQSSED ENAPEFCIDA GSTGNFARFI NHSCEPNLFV QCVLSSHQDI RLARVVLFAA DNISPMQELT YDYGYALDSV
601: HGPDGKVKQL ACYCGALNCR KRLY

Arabidopsis Description

SUVH4Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZB6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.