Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01635 | Sorghum | nucleus | 86.78 | 91.11 |
| Os01t0811300-01 | Rice | nucleus, plasma membrane | 71.12 | 75.27 |
| TraesCS3D01G329100.1 | Wheat | nucleus | 67.52 | 70.79 |
| TraesCS3B01G366900.1 | Wheat | nucleus | 67.52 | 70.79 |
| TraesCS3B01G367200.1 | Wheat | nucleus | 67.52 | 70.79 |
| TraesCS3A01G336100.1 | Wheat | nucleus | 67.52 | 70.6 |
| Zm00001d010646_P001 | Maize | plastid | 58.54 | 69.94 |
| Zm00001d038541_P002 | Maize | nucleus | 60.46 | 68.06 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 5.13 | 52.63 |
| Bra009408.1-P | Field mustard | nucleus | 31.45 | 47.85 |
| Zm00001d041005_P001 | Maize | nucleus | 41.08 | 45.78 |
| KRH56252 | Soybean | nucleus | 12.2 | 44.6 |
| Bra028776.1-P | Field mustard | nucleus | 35.56 | 43.62 |
| Bra005829.1-P | Field mustard | nucleus | 36.07 | 43.57 |
| CDY11319 | Canola | nucleus | 36.07 | 43.57 |
| CDX80930 | Canola | nucleus | 35.69 | 43.17 |
| VIT_13s0047g00120.t01 | Wine grape | nucleus | 39.02 | 42.46 |
| Zm00001d019195_P001 | Maize | nucleus | 46.6 | 42.41 |
| Solyc09g082050.2.1 | Tomato | nucleus | 35.17 | 42.35 |
| AT1G73100.1 | Thale cress | nucleus | 35.94 | 41.85 |
| KRH66648 | Soybean | nucleus | 38.0 | 41.81 |
| CDX68245 | Canola | nucleus | 35.69 | 41.74 |
| AT5G04940.2 | Thale cress | nucleus | 35.82 | 41.64 |
| CDY11129 | Canola | nucleus | 35.69 | 41.55 |
| KRH62706 | Soybean | nucleus | 35.56 | 41.53 |
| Bra009409.1-P | Field mustard | nucleus | 35.43 | 41.5 |
| KRH13229 | Soybean | nucleus | 35.82 | 41.46 |
| CDY61331 | Canola | nucleus | 35.56 | 41.41 |
| KRH20576 | Soybean | nucleus | 35.69 | 41.31 |
| PGSC0003DMT400077329 | Potato | nucleus | 35.56 | 41.28 |
| CDX98805 | Canola | nucleus | 34.27 | 40.76 |
| CDY59935 | Canola | nucleus | 34.4 | 40.67 |
| CDX96449 | Canola | nucleus | 34.15 | 40.49 |
| AT2G05900.1 | Thale cress | cytoskeleton, cytosol, nucleus | 15.92 | 39.74 |
| VIT_08s0040g00360.t01 | Wine grape | nucleus | 37.36 | 39.48 |
| Bra016018.1-P | Field mustard | nucleus | 34.02 | 39.14 |
| Solyc10g077070.1.1 | Tomato | nucleus | 35.69 | 38.94 |
| PGSC0003DMT400018512 | Potato | nucleus | 35.82 | 38.86 |
| CDX98804 | Canola | nucleus | 30.3 | 38.5 |
| CDY14135 | Canola | nucleus | 35.43 | 38.23 |
| KRG95012 | Soybean | plastid | 23.49 | 37.5 |
| AT1G17770.1 | Thale cress | nucleus | 31.58 | 35.5 |
| CDY26218 | Canola | nucleus | 30.3 | 33.81 |
| AT2G24740.1 | Thale cress | nucleus | 30.81 | 31.79 |
| CDY66122 | Canola | nucleus | 28.88 | 31.51 |
| CDY56214 | Canola | nucleus | 31.07 | 30.52 |
| Zm00001d031858_P001 | Maize | nucleus | 24.52 | 29.29 |
| Zm00001d006369_P002 | Maize | nucleus | 11.94 | 27.43 |
| Zm00001d042272_P003 | Maize | nucleus | 23.49 | 27.23 |
| CDX70182 | Canola | nucleus | 35.3 | 27.17 |
| Bra004258.1-P | Field mustard | nucleus | 30.94 | 26.22 |
| Bra025949.1-P | Field mustard | nucleus | 30.04 | 26.2 |
| CDY26221 | Canola | nucleus | 29.91 | 26.03 |
| Zm00001d005445_P001 | Maize | nucleus | 18.74 | 25.57 |
| Zm00001d011956_P002 | Maize | mitochondrion, nucleus, plastid | 22.08 | 23.63 |
| Zm00001d019520_P001 | Maize | nucleus | 18.49 | 21.92 |
| Zm00001d032343_P001 | Maize | plastid | 24.78 | 17.45 |
| Zm00001d051126_P004 | Maize | nucleus | 11.17 | 17.16 |
| Zm00001d005650_P001 | Maize | plastid | 27.98 | 16.76 |
| Zm00001d050267_P001 | Maize | peroxisome | 11.68 | 15.35 |
| Zm00001d049884_P006 | Maize | nucleus | 13.74 | 14.4 |
| CDY01852 | Canola | plasma membrane | 32.99 | 13.85 |
| Zm00001d031851_P002 | Maize | nucleus | 13.22 | 13.83 |
| Zm00001d002938_P001 | Maize | nucleus | 10.78 | 11.81 |
| Zm00001d017798_P002 | Maize | nucleus | 14.12 | 7.37 |
| Zm00001d051590_P001 | Maize | nucleus | 11.42 | 5.91 |
| Zm00001d044165_P001 | Maize | nucleus | 1.03 | 2.63 |
| CDX86631 | Canola | cytosol | 0.0 | 0.0 |
| CDX89821 | Canola | cytosol | 0.0 | 0.0 |
| CDY21127 | Canola | cytosol | 0.0 | 0.0 |
| CDY53193 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.7 | MapMan:12.5.1.16.1 | Gene3D:2.170.270.10 | Gene3D:2.30.280.10 | UniProt:A0A1D6N963 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016571 |
| GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | GO:GO:0032259 | GO:GO:0034968 | InterPro:Hist-Lys_N-MeTrfase_plant |
| InterPro:IPR001214 | InterPro:IPR003105 | InterPro:IPR003616 | InterPro:IPR007728 | InterPro:IPR025794 | InterPro:IPR036987 |
| ProteinID:ONM37083.1 | ProteinID:ONM37084.1 | ProteinID:ONM37085.1 | PFAM:PF00856 | PFAM:PF02182 | PFAM:PF05033 |
| PFscan:PS50280 | PFscan:PS50867 | PFscan:PS50868 | PFscan:PS51015 | PFscan:PS51575 | PANTHER:PTHR22884 |
| PANTHER:PTHR22884:SF384 | InterPro:PUA-like_sf | InterPro:Post-SET_dom | InterPro:Pre-SET_dom | InterPro:SET_dom | SMART:SM00317 |
| SMART:SM00466 | SMART:SM00468 | InterPro:SRA-YDG_sf | InterPro:SRA_YDG | SUPFAM:SSF82199 | SUPFAM:SSF88697 |
| UniParc:UPI00084444AB | EnsemblPlantsGene:Zm00001d043135 | EnsemblPlants:Zm00001d043135_P003 | EnsemblPlants:Zm00001d043135_T003 | SEG:seg | : |
Description
set domain gene113Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH3
Coordinates
chr3:-:189967927..189971654
Molecular Weight (calculated)
85234.8 Da
IEP (calculated)
5.739
GRAVY (calculated)
-0.449
Length
779 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSRGGTQLL QVEMNGPSNF MPTPEQDVLD VKPLRTLAPM FPAPLGVNTF NHSTTPPLIF VTPSGQFQGG FGDWNNSAAK SFFAFSSKDA RGGKADTFSD
101: QNTGTGKAAT FGDQDAFGSQ NVFASDHSTG TGKAATFGDQ DAFGSQNVAT GVQDAAKGQT ATDWTDVSAN PNGPIDAIAI SAYRSTQPNV ISLDDDDDDD
201: DDEPYAANKT SASGRKIKRP SHLSGYNVSD ALVSDSSNSM KVKRPKSSHG KAAADNEHAL LPPSEDPREI VEAVLMTFEA LRRRHLQLDE AQETSKRADL
301: KASAILMSSN IRANPGKRIG VVPGVEIGDI FYFRMELCII GLHAPSMAGI DYMTAKFGDE DDSVAICIVA AGGYDNNDDD TDVLVYSGSG GNSKNSEEKH
401: DQKLERGNLA LERSLSRKNV IRVVRGYKDP GCLTGKVYIY DGLYRIHESW KEKTKSGIFC FKYKLLREPG QPDGVAIWKM SQKWVQNPLT RGSVLNPDLS
501: SGAENLPVCL VNDIDSDEVP HHFTYTTQVE HLKPLSSVKP LQGCRCLSVC LPGDANCCCA QRNGGSLPYS SSGLLVCRKT MVYECGESCR CSFNCRNRVT
601: QKGVRIHFEV FKTGNRGWGL RSWDAIRAGS FICEYVGEVI DDANINLNDI EDDYIFQMSC PGERTLKWNF GPELIGEQST NVSADTFETL PIKISAKRIG
701: NISRFMNHSC APNVFWQPVQ FDHEDDHRPH IMFFALKHIP PMTELTYDYG DVGADPSGVR SPRAKNCLCE SSNCRGFFI
101: QNTGTGKAAT FGDQDAFGSQ NVFASDHSTG TGKAATFGDQ DAFGSQNVAT GVQDAAKGQT ATDWTDVSAN PNGPIDAIAI SAYRSTQPNV ISLDDDDDDD
201: DDEPYAANKT SASGRKIKRP SHLSGYNVSD ALVSDSSNSM KVKRPKSSHG KAAADNEHAL LPPSEDPREI VEAVLMTFEA LRRRHLQLDE AQETSKRADL
301: KASAILMSSN IRANPGKRIG VVPGVEIGDI FYFRMELCII GLHAPSMAGI DYMTAKFGDE DDSVAICIVA AGGYDNNDDD TDVLVYSGSG GNSKNSEEKH
401: DQKLERGNLA LERSLSRKNV IRVVRGYKDP GCLTGKVYIY DGLYRIHESW KEKTKSGIFC FKYKLLREPG QPDGVAIWKM SQKWVQNPLT RGSVLNPDLS
501: SGAENLPVCL VNDIDSDEVP HHFTYTTQVE HLKPLSSVKP LQGCRCLSVC LPGDANCCCA QRNGGSLPYS SSGLLVCRKT MVYECGESCR CSFNCRNRVT
601: QKGVRIHFEV FKTGNRGWGL RSWDAIRAGS FICEYVGEVI DDANINLNDI EDDYIFQMSC PGERTLKWNF GPELIGEQST NVSADTFETL PIKISAKRIG
701: NISRFMNHSC APNVFWQPVQ FDHEDDHRPH IMFFALKHIP PMTELTYDYG DVGADPSGVR SPRAKNCLCE SSNCRGFFI
001: MDKSIPIKAI PVACVRPDLV DDVTKNTSTI PTMVSPVLTN MPSATSPLLM VPPLRTIWPS NKEWYDGDAG PSSTGPIKRE ASDNTNDTAH NTFAPPPEMV
101: IPLITIRPSD DSSNYSCDAG AGPSTGPVKR GRGRPKGSKN STPTEPKKPK VYDPNSLKVT SRGNFDSEIT EAETETGNQE IVDSVMMRFD AVRRRLCQIN
201: HPEDILTTAS GNCTKMGVKT NTRRRIGAVP GIHVGDIFYY WGEMCLVGLH KSNYGGIDFF TAAESAVEGH AAMCVVTAGQ YDGETEGLDT LIYSGQGGTD
301: VYGNARDQEM KGGNLALEAS VSKGNDVRVV RGVIHPHENN QKIYIYDGMY LVSKFWTVTG KSGFKEFRFK LVRKPNQPPA YAIWKTVENL RNHDLIDSRQ
401: GFILEDLSFG AELLRVPLVN EVDEDDKTIP EDFDYIPSQC HSGMMTHEFH FDRQSLGCQN CRHQPCMHQN CTCVQRNGDL LPYHNNILVC RKPLIYECGG
501: SCPCPDHCPT RLVQTGLKLH LEVFKTRNCG WGLRSWDPIR AGTFICEFAG LRKTKEEVEE DDDYLFDTSK IYQRFRWNYE PELLLEDSWE QVSEFINLPT
601: QVLISAKEKG NVGRFMNHSC SPNVFWQPIE YENRGDVYLL IGLFAMKHIP PMTELTYDYG VSCVERSEED EVLLYKGKKT CLCGSVKCRG SFT
101: IPLITIRPSD DSSNYSCDAG AGPSTGPVKR GRGRPKGSKN STPTEPKKPK VYDPNSLKVT SRGNFDSEIT EAETETGNQE IVDSVMMRFD AVRRRLCQIN
201: HPEDILTTAS GNCTKMGVKT NTRRRIGAVP GIHVGDIFYY WGEMCLVGLH KSNYGGIDFF TAAESAVEGH AAMCVVTAGQ YDGETEGLDT LIYSGQGGTD
301: VYGNARDQEM KGGNLALEAS VSKGNDVRVV RGVIHPHENN QKIYIYDGMY LVSKFWTVTG KSGFKEFRFK LVRKPNQPPA YAIWKTVENL RNHDLIDSRQ
401: GFILEDLSFG AELLRVPLVN EVDEDDKTIP EDFDYIPSQC HSGMMTHEFH FDRQSLGCQN CRHQPCMHQN CTCVQRNGDL LPYHNNILVC RKPLIYECGG
501: SCPCPDHCPT RLVQTGLKLH LEVFKTRNCG WGLRSWDPIR AGTFICEFAG LRKTKEEVEE DDDYLFDTSK IYQRFRWNYE PELLLEDSWE QVSEFINLPT
601: QVLISAKEKG NVGRFMNHSC SPNVFWQPIE YENRGDVYLL IGLFAMKHIP PMTELTYDYG VSCVERSEED EVLLYKGKKT CLCGSVKCRG SFT
Arabidopsis Description
SUVH7Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.