Factsheet for Zm00001d047043_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14021	Sorghum	nucleus	68.59	67.19
Zm00001d020762_P001	Maize	nucleus	40.88	40.23
GSMUA_Achr3P06790_001	Banana	cytosol	27.02	36.0
AT5G09540.1	Thale cress	nucleus	20.09	31.07
CDY21586	Canola	cytosol	19.86	29.76
Bra009389.1-P	Field mustard	cytosol	20.09	29.69
CDY69792	Canola	cytosol	20.09	29.69
GSMUA_Achr10P...	Banana	cytosol	27.94	28.74
Zm00001d029409_P001	Maize	nucleus, peroxisome, plastid	26.1	28.54
Zm00001d047214_P001	Maize	extracellular	26.1	28.46
GSMUA_Achr1P21390_001	Banana	cytosol	25.17	27.05
CDY31322	Canola	cytosol	22.4	26.01
Bra031921.1-P	Field mustard	cytosol	21.94	25.75
Zm00001d022168_P001	Maize	cytosol, mitochondrion, peroxisome	25.87	25.34
KRH42098	Soybean	nucleus	24.94	23.74
Zm00001d030537_P001	Maize	cytosol, nucleus, plastid	10.62	23.35
Solyc07g007230.2.1	Tomato	nucleus	21.94	22.3
KRH49811	Soybean	nucleus	24.25	22.29
VIT_03s0017g00300.t01	Wine grape	nucleus	24.71	22.02
AT5G64360.7	Thale cress	nucleus	23.09	21.55
Bra024289.1-P	Field mustard	nucleus	21.94	20.7
CDX84519	Canola	nucleus	22.63	20.63
KRH10601	Soybean	nucleus	22.63	19.72
CDY58269	Canola	nucleus	22.4	19.32
KRH21766	Soybean	nucleus	21.25	18.44
PGSC0003DMT400079004	Potato	cytosol	21.25	18.0
CDY46799	Canola	nucleus	14.55	16.07
Solyc11g006140.1.1	Tomato	nucleus	21.94	15.97
Solyc11g006170.1.1	Tomato	nucleus	22.4	14.95
PGSC0003DMT400073845	Potato	cytosol	22.17	14.72
Solyc01g105780.2.1	Tomato	nucleus	22.17	13.39
CDY45966	Canola	nucleus	22.63	13.17
Bra027007.1-P	Field mustard	nucleus	22.63	13.14
CDY45473	Canola	nucleus	22.63	13.1
PGSC0003DMT400083794	Potato	nucleus	22.17	12.92
AT1G62970.1	Thale cress	nucleus	22.4	12.17

Protein Annotations

EnsemblPlants:Zm00001d047043_P001	EnsemblPlants:Zm00001d047043_T001	EnsemblPlantsGene:Zm00001d047043	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45496	PFscan:PS50076	ProteinID:AQL05463.1	SEG:seg
SUPFAM:SSF46565	UniParc:UPI0008459B38	UniProt:A0A1D6P6H4	MapMan:35.2	:	:

Description

Chaperone DnaJ-domain superfamily protein

Coordinates

chr9:+:116433020..116436068

Molecular Weight (calculated)

45510.1 Da

IEP (calculated)

9.064

GRAVY (calculated)

-0.322

Length

433 amino acids

Sequence
(BLAST)

001: MDPSVARRQE AERFMNIAEK LLMARDLEGC KQFVAQALSF DPRTPGADDL LAAADALLAA QRRRLPSGPL DPYAVLGLDS AVPASRDPDV VHSHYRRLSL
101: LLNRSHPDRP CSLAFAEAAR LVADAWAFLS DPLRKASLDS DLDAAAAATN AAAAAAAAAA ARVPIDPHPE KQNQLQSQPP PPPPLAPQPM QTVSGTPPPK
201: RGRPPRAAKT PATPPAPQTV SGTSPTKRGR PPRAAKQSPE VERNQEGEAQ QAPVFWTACP SCCHLHQYDH SYESQTLLCP SCRRPFVATA MSTQPPIVPG
301: TDMYYCSWGF FPMGFPGGPA FAEPLNSPQQ QAPAALGFYP MGPYLPLPSL SGIVEGEGNK AVDAGTGIPV IPTVAAPASA SSPAPTAATP VEFLHVKVGA
401: KKRGRPKGSK NKKAVVEGKG RAFSAGGDVA AVV

Best Arabidopsis Sequence Match ( AT5G64360.1 )
(BLAST)

001: MVGGRGGVGG GGGNRVEADQ WLVTSEKLLA SSDLQGAKTF AIRACEADPT RAEAADYILA ICDILLAGET RLGDSNLPDW YAVLRLGRLA QNPEHVATQY
101: RRLALLLNPS VNRLPFADRA LKIVSDAWFV LSDPFKKSFY DRELQLSQLG QSGFHPQTQS HQNFQWEPSS STAVYPPPRS QSQAGTSADP MATSFWTACP
201: YCFVLFEYPK AYEECTLKCQ ECRRAFQAVT IPKPPVDKKD DEDVYFCSWA LFPLGFSGEF QAPSWSPISP LFACPLQKLD GEPKKRKEPG KETYVRSNKK
301: HGVEEVQNVE SISSASNHAV SIASNAAAVG SSTGVMSKPG SYITRKRMGT GAKNLGRLDL NVEFSNEVEE PGVAGGGNAG NGIGSNREVD NMEGIGFFEG
401: LDEFLNSLPI LSVVGDDKIK AT

Arabidopsis Description

AT5G64360 protein [Source:UniProtKB/TrEMBL;Acc:Q9FMF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.