Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029409_P001 | Maize | nucleus, peroxisome, plastid | 82.87 | 83.08 |
| EER92178 | Sorghum | nucleus | 78.84 | 77.67 |
| TraesCS4D01G156000.1 | Wheat | nucleus | 68.26 | 67.58 |
| HORVU4Hr1G039650.1 | Barley | nucleus | 67.25 | 67.09 |
| TraesCS4A01G160900.1 | Wheat | cytosol | 67.25 | 66.75 |
| Os03t0392400-01 | Rice | nucleus | 67.76 | 66.42 |
| TraesCS4B01G160100.1 | Wheat | cytosol | 65.74 | 65.09 |
| Zm00001d022168_P001 | Maize | cytosol, mitochondrion, peroxisome | 50.63 | 45.48 |
| GSMUA_Achr1P21390_001 | Banana | cytosol | 41.06 | 40.45 |
| GSMUA_Achr3P06790_001 | Banana | cytosol | 32.75 | 40.0 |
| GSMUA_Achr10P... | Banana | cytosol | 42.07 | 39.67 |
| Zm00001d030537_P001 | Maize | cytosol, nucleus, plastid | 16.62 | 33.5 |
| Bra009389.1-P | Field mustard | cytosol | 23.68 | 32.08 |
| CDY69792 | Canola | cytosol | 23.68 | 32.08 |
| CDY21586 | Canola | cytosol | 22.92 | 31.49 |
| AT5G09540.1 | Thale cress | nucleus | 21.91 | 31.07 |
| Bra031921.1-P | Field mustard | cytosol | 26.95 | 29.0 |
| CDY31322 | Canola | cytosol | 26.7 | 28.42 |
| Zm00001d047043_P001 | Maize | nucleus | 28.46 | 26.1 |
| Solyc07g007230.2.1 | Tomato | nucleus | 27.2 | 25.35 |
| AT5G64360.7 | Thale cress | nucleus | 28.97 | 24.78 |
| Bra024289.1-P | Field mustard | nucleus | 28.46 | 24.62 |
| KRH42098 | Soybean | nucleus | 28.21 | 24.62 |
| VIT_03s0017g00300.t01 | Wine grape | nucleus | 29.97 | 24.49 |
| CDX84519 | Canola | nucleus | 28.21 | 23.58 |
| KRH49811 | Soybean | nucleus | 27.96 | 23.57 |
| CDY58269 | Canola | nucleus | 27.96 | 22.11 |
| Zm00001d020762_P001 | Maize | nucleus | 24.43 | 22.05 |
| KRH10601 | Soybean | nucleus | 26.95 | 21.53 |
| KRH21766 | Soybean | nucleus | 26.7 | 21.24 |
| PGSC0003DMT400079004 | Potato | cytosol | 27.2 | 21.14 |
| CDY46799 | Canola | nucleus | 18.64 | 18.88 |
| Solyc11g006170.1.1 | Tomato | nucleus | 27.96 | 17.1 |
| Solyc01g105780.2.1 | Tomato | nucleus | 29.97 | 16.6 |
| PGSC0003DMT400073845 | Potato | cytosol | 27.2 | 16.56 |
| Solyc11g006140.1.1 | Tomato | nucleus | 23.93 | 15.97 |
| PGSC0003DMT400083794 | Potato | nucleus | 29.47 | 15.75 |
| CDY45473 | Canola | nucleus | 23.93 | 12.7 |
| Bra027007.1-P | Field mustard | nucleus | 23.68 | 12.6 |
| CDY45966 | Canola | nucleus | 23.43 | 12.5 |
| AT1G62970.1 | Thale cress | nucleus | 24.18 | 12.05 |
Protein Annotations
| Gene3D:1.10.287.110 | EntrezGene:100193861 | MapMan:35.2 | ProteinID:AQL05900.1 | UniProt:B4FGJ9 | EMBL:BT036237 |
| InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFscan:PS50076 | PANTHER:PTHR45496 |
| SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI00017B6E33 | EnsemblPlantsGene:Zm00001d047214 | EnsemblPlants:Zm00001d047214_P001 | EnsemblPlants:Zm00001d047214_T001 |
| SEG:seg | : | : | : | : | : |
Description
Chaperone DnaJ-domain superfamily protein
Coordinates
chr9:+:122422382..122423575
Molecular Weight (calculated)
41667.8 Da
IEP (calculated)
6.599
GRAVY (calculated)
-0.413
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFSAGGSGS GGGGGGAGDG RAQAERWLEI AEKLLAASDL VGCKRFAERA LEADPLLPGA DEILAVADVL LASQSMGPSG HQDPLAILQL PPGVNPDQAS
101: VSRAFRRLAL LLGPRNPHHG AEMALRLVND AYAFLSDPSR RPPPPANPAT GTPSSSHYAA APAPDPREFW TACPFCCYVH QYPRDLVGRA LKCPNEGCRR
201: GFVASEIPTP PTVVPGTDMY HCAWGFFPLG FPNAADLGAN WKPFYKAFPW NTAPSGQGAD GRSHGNRGGR QAQNDSARGG SSRGRIKKTT ARKKVGAGLR
301: RRSLGGGVES GIDSSMLGQE GWAGDEDGGD GRTEEVRGIN INEAAQATDG TGRVNVSGAG GVEDMGNFHI DVDATEDILG NLHNLPFLRV DNLGRMI
101: VSRAFRRLAL LLGPRNPHHG AEMALRLVND AYAFLSDPSR RPPPPANPAT GTPSSSHYAA APAPDPREFW TACPFCCYVH QYPRDLVGRA LKCPNEGCRR
201: GFVASEIPTP PTVVPGTDMY HCAWGFFPLG FPNAADLGAN WKPFYKAFPW NTAPSGQGAD GRSHGNRGGR QAQNDSARGG SSRGRIKKTT ARKKVGAGLR
301: RRSLGGGVES GIDSSMLGQE GWAGDEDGGD GRTEEVRGIN INEAAQATDG TGRVNVSGAG GVEDMGNFHI DVDATEDILG NLHNLPFLRV DNLGRMI
001: MGDNNPNRSE AERLLGIAEK LLESRDLNGS KEFAILAQET EPLLEGTDQI LAVVDVLLSS APENRIKNQP NWYKILQIED LTESSTDNDL IKKQYRRLAL
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
101: LLHPDKNRFP FADQAFRFVL DAWEVLSTPT KKSQFDGDLN LIFTKVNLNT QKSKKKTTTN EKMSTFWTAC PYCYSLHEYP RVYQEYCIRC QNCQRAFHAA
201: SIPQLPPLIP GKDEYYCCWG FFPMGFVGGK GGEAAIANGV DAAKFPNWMP PVFSSGGVAA PPSGNGVSFD GWSGGAAKRD NEAVRSNNGV GVNSDGTPKK
301: RGRGRPKKNP V
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.