Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- peroxisome 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU80395 | Sorghum | nucleus | 73.36 | 73.36 |
| Os08t0399300-00 | Rice | nucleus | 35.41 | 24.08 |
| Os08t0400000-01 | Rice | mitochondrion | 36.42 | 23.3 |
| TraesCS1D01G118300.1 | Wheat | nucleus, plastid | 37.77 | 18.3 |
| Zm00001d032343_P001 | Maize | plastid | 32.88 | 17.63 |
| Os08t0400200-00 | Rice | nucleus | 34.74 | 17.56 |
| TraesCS1B01G137100.1 | Wheat | nucleus, plastid | 37.94 | 16.94 |
| TraesCS1A01G117300.1 | Wheat | nucleus | 26.48 | 16.58 |
| HORVU1Hr1G025960.1 | Barley | nucleus, plastid | 37.94 | 16.26 |
| Zm00001d010646_P001 | Maize | plastid | 15.01 | 13.65 |
| Zm00001d038541_P002 | Maize | nucleus | 15.51 | 13.29 |
| Zm00001d031858_P001 | Maize | nucleus | 14.33 | 13.04 |
| Zm00001d005650_P001 | Maize | plastid | 28.16 | 12.84 |
| Zm00001d041005_P001 | Maize | nucleus | 15.01 | 12.73 |
| Zm00001d042272_P003 | Maize | nucleus | 14.17 | 12.5 |
| Zm00001d043135_P003 | Maize | nucleus | 15.35 | 11.68 |
| Zm00001d011956_P002 | Maize | mitochondrion, nucleus, plastid | 14.0 | 11.4 |
| Zm00001d019195_P001 | Maize | nucleus | 14.17 | 9.81 |
| Zm00001d005445_P001 | Maize | nucleus | 7.76 | 8.06 |
| Zm00001d019520_P001 | Maize | nucleus | 8.09 | 7.31 |
| Zm00001d002938_P001 | Maize | nucleus | 3.37 | 2.81 |
| Zm00001d049884_P006 | Maize | nucleus | 3.37 | 2.69 |
| Zm00001d031851_P002 | Maize | nucleus | 3.04 | 2.42 |
| Zm00001d051590_P001 | Maize | nucleus | 5.9 | 2.32 |
| Zm00001d044165_P001 | Maize | nucleus | 1.01 | 1.97 |
| Zm00001d017798_P002 | Maize | nucleus | 4.89 | 1.94 |
| Zm00001d051126_P004 | Maize | nucleus | 1.18 | 1.38 |
| Zm00001d006369_P002 | Maize | nucleus | 0.67 | 1.18 |
Protein Annotations
| Gene3D:2.30.280.10 | MapMan:35.1 | ProteinID:AQK52224.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | InterPro:IPR003105 | InterPro:IPR036987 | UniProt:K7UED0 | PFAM:PF02182 | PFscan:PS51015 |
| PANTHER:PTHR22884 | PANTHER:PTHR22884:SF471 | InterPro:PUA-like_sf | SMART:SM00466 | InterPro:SRA-YDG_sf | InterPro:SRA_YDG |
| SUPFAM:SSF88697 | UniParc:UPI000221B1BA | EnsemblPlantsGene:Zm00001d050267 | EnsemblPlants:Zm00001d050267_P001 | EnsemblPlants:Zm00001d050267_T001 | SEG:seg |
Description
Putative YDG/SRA domain containing protein
Coordinates
chr4:-:77405120..77406901
Molecular Weight (calculated)
63915.3 Da
IEP (calculated)
10.610
GRAVY (calculated)
-0.370
Length
593 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLQAARLDA ARQRVYTGAP TSSALGQPQP QHLGAGDRRR CLPPRPPTSR GKTRSGGVGK ADEVRGTRDR DTRHGSGVMT CYSVAVVTGD GAPGVARKDK
101: GVAELGGKRC LDLAEEKGVS DAGRKMGLGL AAYPLAPLPK RRLVSATRRF SLGYGREAAA TPADDDSRLV VAVASDALKK TALPLSVGKA GSSVMEVESS
201: AAVVSAPIAD SGHHGLEAEL QRSYESSCWS SVPSATGFLD TGSQRSSGFE RNVLVPGTQR LLPKPRMISA IRRFPPGCGR VRASLVARGV SKVRLPLLGK
301: VEVMPAKQQV VKAHASRKKC VRTEGDVAAT IRNSFGPKKK GNIKQKSMLP SNVEDGILKA LAAREEKYAI QNVDARSKAK MLSRRFEFMC RAIIQAMKEQ
401: PLKLHRIDLA AADLIKKMPG FTQPGPIVGN VLGIEVGDEF LYRVELNIVG LHRPYQGGID TTRDKYNVLI AISIVASGGY PDQLSRLGEL VYTGSGGKIS
501: GNKGEGDQKL ERGNLALKNC IRTKSPVRVI HTFKCLDREE GNHSMAKETT IFTYDGLYNV VDCWREGQPG SKVFKFKLQR IPGQTQVLST NRI
101: GVAELGGKRC LDLAEEKGVS DAGRKMGLGL AAYPLAPLPK RRLVSATRRF SLGYGREAAA TPADDDSRLV VAVASDALKK TALPLSVGKA GSSVMEVESS
201: AAVVSAPIAD SGHHGLEAEL QRSYESSCWS SVPSATGFLD TGSQRSSGFE RNVLVPGTQR LLPKPRMISA IRRFPPGCGR VRASLVARGV SKVRLPLLGK
301: VEVMPAKQQV VKAHASRKKC VRTEGDVAAT IRNSFGPKKK GNIKQKSMLP SNVEDGILKA LAAREEKYAI QNVDARSKAK MLSRRFEFMC RAIIQAMKEQ
401: PLKLHRIDLA AADLIKKMPG FTQPGPIVGN VLGIEVGDEF LYRVELNIVG LHRPYQGGID TTRDKYNVLI AISIVASGGY PDQLSRLGEL VYTGSGGKIS
501: GNKGEGDQKL ERGNLALKNC IRTKSPVRVI HTFKCLDREE GNHSMAKETT IFTYDGLYNV VDCWREGQPG SKVFKFKLQR IPGQTQVLST NRI
001: MGRRKSKRFK VAAESEFSPD FGSITRQLRS RRMQKEFTVE TYETRNVSDV CVLSSQADVE LIPGEIVAER DSFKSVDCND MSVGLTEGAE SLGVNMQEPM
101: KDRNMPENTS EQNMVEVHPP SISLPEEDMM GSVCRKSITG TKELHGRTIS VGRDLSPNMG SKFSKNGKTA KRSISVEEEN LVLEKSDSGD HLGPSPEVLE
201: LEKSEVWIIT DKGVVMPSPV KPSEKRNGDY GEGSMRKNSE RVALDKKRLA SKFRLSNGGL PSCSSSGDSA RYKVKETMRL FHETCKKIMQ EEEARPRKRD
301: GGNFKVVCEA SKILKSKGKN LYSGTQIIGT VPGVEVGDEF QYRMELNLLG IHRPSQSGID YMKDDGGELV ATSIVSSGGY NDVLDNSDVL IYTGQGGNVG
401: KKKNNEPPKD QQLVTGNLAL KNSINKKNPV RVIRGIKNTT LQSSVVAKNY VYDGLYLVEE YWEETGSHGK LVFKFKLRRI PGQPELPWKE VAKSKKSEFR
501: DGLCNVDITE GKETLPICAV NNLDDEKPPP FIYTAKMIYP DWCRPIPPKS CGCTNGCSKS KNCACIVKNG GKIPYYDGAI VEIKPLVYEC GPHCKCPPSC
601: NMRVSQHGIK IKLEIFKTES RGWGVRSLES IPIGSFICEY AGELLEDKQA ESLTGKDEYL FDLGDEDDPF TINAAQKGNI GRFINHSCSP NLYAQDVLYD
701: HEEIRIPHIM FFALDNIPPL QELSYDYNYK IDQVYDSNGN IKKKFCYCGS AECSGRLY
101: KDRNMPENTS EQNMVEVHPP SISLPEEDMM GSVCRKSITG TKELHGRTIS VGRDLSPNMG SKFSKNGKTA KRSISVEEEN LVLEKSDSGD HLGPSPEVLE
201: LEKSEVWIIT DKGVVMPSPV KPSEKRNGDY GEGSMRKNSE RVALDKKRLA SKFRLSNGGL PSCSSSGDSA RYKVKETMRL FHETCKKIMQ EEEARPRKRD
301: GGNFKVVCEA SKILKSKGKN LYSGTQIIGT VPGVEVGDEF QYRMELNLLG IHRPSQSGID YMKDDGGELV ATSIVSSGGY NDVLDNSDVL IYTGQGGNVG
401: KKKNNEPPKD QQLVTGNLAL KNSINKKNPV RVIRGIKNTT LQSSVVAKNY VYDGLYLVEE YWEETGSHGK LVFKFKLRRI PGQPELPWKE VAKSKKSEFR
501: DGLCNVDITE GKETLPICAV NNLDDEKPPP FIYTAKMIYP DWCRPIPPKS CGCTNGCSKS KNCACIVKNG GKIPYYDGAI VEIKPLVYEC GPHCKCPPSC
601: NMRVSQHGIK IKLEIFKTES RGWGVRSLES IPIGSFICEY AGELLEDKQA ESLTGKDEYL FDLGDEDDPF TINAAQKGNI GRFINHSCSP NLYAQDVLYD
701: HEEIRIPHIM FFALDNIPPL QELSYDYNYK IDQVYDSNGN IKKKFCYCGS AECSGRLY
Arabidopsis Description
SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.