Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU85329 | Sorghum | nucleus | 79.88 | 59.73 |
| TraesCS2A01G478800.1 | Wheat | nucleus | 59.57 | 50.33 |
| TraesCS2B01G503200.1 | Wheat | nucleus | 59.37 | 50.08 |
| TraesCS2D01G478100.1 | Wheat | nucleus | 58.38 | 49.5 |
| CDX92067 | Canola | nucleus | 41.42 | 44.49 |
| AT3G04380.1 | Thale cress | nucleus | 42.6 | 43.9 |
| TraesCS6A01G226600.1 | Wheat | nucleus | 58.78 | 43.76 |
| TraesCS6D01G208400.1 | Wheat | nucleus | 58.78 | 43.76 |
| TraesCS6B01G255000.1 | Wheat | nucleus | 58.58 | 43.61 |
| Os02t0621100-01 | Rice | nucleus | 62.92 | 43.05 |
| PGSC0003DMT400051920 | Potato | nucleus | 40.43 | 40.27 |
| VIT_05s0049g01800.t01 | Wine grape | nucleus | 43.59 | 39.46 |
| CDY49341 | Canola | nucleus | 41.03 | 37.34 |
| GSMUA_Achr1P20340_001 | Banana | nucleus | 51.28 | 36.62 |
| HORVU6Hr1G057990.5 | Barley | nucleus | 57.59 | 36.18 |
| KRH34133 | Soybean | nucleus | 47.34 | 34.99 |
| KRH68776 | Soybean | nucleus | 44.97 | 33.68 |
| KRG92731 | Soybean | nucleus | 46.94 | 33.38 |
| KRG97025 | Soybean | nucleus | 17.95 | 32.04 |
| Bra036004.1-P | Field mustard | nucleus | 38.86 | 31.52 |
| CDY14903 | Canola | nucleus | 39.25 | 31.09 |
| KRG95723 | Soybean | nucleus | 43.39 | 30.39 |
| Zm00001d049884_P006 | Maize | nucleus | 43.2 | 29.48 |
| PGSC0003DMT400044180 | Potato | nucleus | 44.77 | 29.44 |
| Zm00001d031851_P002 | Maize | nucleus | 43.2 | 29.4 |
| CDX94744 | Canola | nucleus | 39.65 | 29.34 |
| Solyc09g090630.1.1 | Tomato | nucleus | 45.36 | 28.97 |
| Bra001104.1-P | Field mustard | nucleus | 42.8 | 28.7 |
| AT5G43990.9 | Thale cress | nucleus | 41.81 | 28.65 |
| VIT_07s0005g04190.t01 | Wine grape | mitochondrion, nucleus | 47.53 | 28.42 |
| CDY22319 | Canola | nucleus | 38.86 | 27.94 |
| KRH32246 | Soybean | nucleus | 44.38 | 27.41 |
| KRH19618 | Soybean | nucleus | 44.38 | 27.37 |
| AT1G04050.1 | Thale cress | nucleus | 39.45 | 27.25 |
| Solyc06g083760.2.1 | Tomato | nucleus | 45.76 | 26.95 |
| Bra033710.1-P | Field mustard | nucleus | 39.45 | 26.67 |
| Solyc09g072890.1.1 | Tomato | nucleus | 43.2 | 26.55 |
| CDX96935 | Canola | nucleus | 39.25 | 25.38 |
| Zm00001d006369_P002 | Maize | nucleus | 16.96 | 25.37 |
| CDY42922 | Canola | plasma membrane, vacuole | 41.42 | 25.36 |
| Zm00001d002938_P001 | Maize | nucleus | 33.92 | 24.19 |
| Bra040197.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 41.03 | 22.08 |
| Zm00001d010646_P001 | Maize | plastid | 17.75 | 13.8 |
| Zm00001d005445_P001 | Maize | nucleus | 14.99 | 13.31 |
| Zm00001d038541_P002 | Maize | nucleus | 18.15 | 13.29 |
| Zm00001d041005_P001 | Maize | nucleus | 17.95 | 13.02 |
| Zm00001d042272_P003 | Maize | nucleus | 17.16 | 12.95 |
| Zm00001d019520_P001 | Maize | nucleus | 15.78 | 12.18 |
| Zm00001d019195_P001 | Maize | nucleus | 20.32 | 12.03 |
| Zm00001d031858_P001 | Maize | nucleus | 14.79 | 11.5 |
| Zm00001d043135_P003 | Maize | nucleus | 17.16 | 11.17 |
| Zm00001d011956_P002 | Maize | mitochondrion, nucleus, plastid | 14.4 | 10.03 |
| Zm00001d032343_P001 | Maize | plastid | 16.17 | 7.41 |
| Zm00001d005650_P001 | Maize | plastid | 17.95 | 6.99 |
| Zm00001d017798_P002 | Maize | nucleus | 19.53 | 6.63 |
| Zm00001d051590_P001 | Maize | nucleus | 13.81 | 4.65 |
| Zm00001d050267_P001 | Maize | peroxisome | 1.38 | 1.18 |
| CDY42923 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX92068 | Canola | mitochondrion | 0.0 | 0.0 |
| Zm00001d044165_P001 | Maize | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00310+2.1.1.43 | Gene3D:1.10.8.850 | EntrezGene:103653787 | MapMan:12.3.3.7 | UniProt:A0A1D6Q562 | ProteinID:AQK53679.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008168 | GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0018024 |
| GO:GO:0019538 | GO:GO:0032259 | GO:GO:0034968 | InterPro:IPR001214 | InterPro:IPR003616 | InterPro:IPR007728 |
| InterPro:IPR025776 | PFAM:PF00856 | PFAM:PF05033 | PFAM:PF10440 | PFscan:PS50280 | PFscan:PS50867 |
| PFscan:PS50868 | PFscan:PS51580 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF459 | InterPro:Post-SET_dom | InterPro:Pre-SET_dom |
| InterPro:SET_dom | SMART:SM00317 | SMART:SM00468 | SUPFAM:SSF82199 | InterPro:SUVR4/1/2 | UniParc:UPI00084531FF |
| InterPro:WIYLD_domain | EnsemblPlantsGene:Zm00001d051126 | EnsemblPlants:Zm00001d051126_P004 | EnsemblPlants:Zm00001d051126_T004 | : | : |
Description
Putative SET-domain containing protein family
Coordinates
chr4:+:144683072..144690176
Molecular Weight (calculated)
56680.1 Da
IEP (calculated)
6.360
GRAVY (calculated)
-0.520
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MELSRISTEK FDDAVKSMTD AGFLKETVEQ ALKKLIILYE ENWEHIEADN YSTLVEALLG HSDPKQAGQK KRAEKNLNVD SDHYNKKLKI KGGQTPRSSM
101: HGSAKKELTE EADSLEERTT GNQLQTSRAE TTITGENSCT LLESQDPCTS ETPTVMCPKV LGSNRHNGIK RQYHDVNDIT RGEECVSIPI VCGEDGVLPP
201: PFHYISQNTT FQDACINLSL ARIGDENCCS GCFGDCLAEP LPCACARETG GDFAYTRDGL LKEGFLDACV SMLREPLKQP HFYCKGVCPI EQIMKGVSSA
301: KPDACKGHLI KKFIKECWIK CGCTRNCGNR VVQRGITRKL QASEVFLASR KKGWGLRSAE NLPRGAFVCE YVGEILTNTE LHKRNTELYG KNNKKAGKAR
401: HTYPVNLDAD WGTEGVLNDE EALCLDGTFY GNVARFMNHR CIDGNIIAIP VEVETPDHHY YHLAFFTTRE VEAFEELTWD YGIDFDDVNH PVKAFKCHCG
501: STFCRGR
101: HGSAKKELTE EADSLEERTT GNQLQTSRAE TTITGENSCT LLESQDPCTS ETPTVMCPKV LGSNRHNGIK RQYHDVNDIT RGEECVSIPI VCGEDGVLPP
201: PFHYISQNTT FQDACINLSL ARIGDENCCS GCFGDCLAEP LPCACARETG GDFAYTRDGL LKEGFLDACV SMLREPLKQP HFYCKGVCPI EQIMKGVSSA
301: KPDACKGHLI KKFIKECWIK CGCTRNCGNR VVQRGITRKL QASEVFLASR KKGWGLRSAE NLPRGAFVCE YVGEILTNTE LHKRNTELYG KNNKKAGKAR
401: HTYPVNLDAD WGTEGVLNDE EALCLDGTFY GNVARFMNHR CIDGNIIAIP VEVETPDHHY YHLAFFTTRE VEAFEELTWD YGIDFDDVNH PVKAFKCHCG
501: STFCRGR
001: MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGNRGKNLKV
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK
Arabidopsis Description
SUVR4Histone-lysine N-methyltransferase SUVR4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W595]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.