Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10208 | Canola | cytosol | 68.0 | 72.65 |
| Bra015509.1-P | Field mustard | cytosol | 67.2 | 72.41 |
| CDY06650 | Canola | cytosol | 67.2 | 72.41 |
| AT2G30930.1 | Thale cress | plastid | 55.2 | 42.07 |
Protein Annotations
| MapMan:35.2 | EntrezGene:837165 | ProteinID:AAF24815.1 | ProteinID:AEE28003.1 | ArrayExpress:AT1G06540 | EnsemblPlantsGene:AT1G06540 |
| RefSeq:AT1G06540 | TAIR:AT1G06540 | RefSeq:AT1G06540-TAIR-G | EnsemblPlants:AT1G06540.1 | TAIR:AT1G06540.1 | EMBL:AY090922 |
| GO:GO:0008150 | RefSeq:NP_172141.1 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009046 | PO:PO:0025195 | PO:PO:0025281 |
| UniProt:Q9SHJ7 | UniParc:UPI00000A7ED1 | : | : | : | : |
Description
F12K11.13 [Source:UniProtKB/TrEMBL;Acc:Q9SHJ7]
Coordinates
chr1:-:2001406..2003446
Molecular Weight (calculated)
13031.4 Da
IEP (calculated)
5.147
GRAVY (calculated)
-0.190
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSLLQKAT SALGEAKQTV MASAETAKTN VVKDAVDNVV SRGIDGAKTL LHGLEEKKDE VSSKIMGAVT HFTGSADSAA TTANRDLPVS TDNQPLLAAG
101: REVETPWWKN CCGILDLLKA SSSAT
101: REVETPWWKN CCGILDLLKA SSSAT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.