Factsheet for AT1G74540.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
plastid 2
endoplasmic reticulum 4
extracellular 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003795.1-P	Field mustard	mitochondrion	78.87	81.5
CDX68176	Canola	endoplasmic reticulum	80.89	80.72
CDX85843	Canola	endoplasmic reticulum	80.48	80.32
AT1G74550.1	Thale cress	endoplasmic reticulum	68.41	69.82
AT2G40890.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	50.3	49.21
AT5G07990.1	Thale cress	endoplasmic reticulum, golgi	34.0	32.94
AT1G01280.1	Thale cress	endoplasmic reticulum, extracellular	30.99	30.2

Protein Annotations

Gene3D:1.10.630.10	MapMan:21.6.1.2	EntrezGene:843795	UniProt:A0A178WNC9	ProteinID:AAG52369.1	ProteinID:AEE35607.1
ArrayExpress:AT1G74540	EnsemblPlantsGene:AT1G74540	RefSeq:AT1G74540	TAIR:AT1G74540	RefSeq:AT1G74540-TAIR-G	EnsemblPlants:AT1G74540.1
TAIR:AT1G74540.1	EMBL:AY088555	Unigene:At.34871	Symbol:CYP98A8	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	EMBL:DQ446429	EMBL:DQ652933	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0008216	GO:GO:0009058	GO:GO:0009809	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0016705	GO:GO:0019748	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
GO:GO:0072532	GO:GO:0072547	GO:GO:0072548	GO:GO:0072549	GO:GO:0072550	GO:GO:0072551
GO:GO:0072552	InterPro:IPR036396	RefSeq:NP_177594.1	ProteinID:OAP19075.1	PFAM:PF00067	PO:PO:0007611
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0025022	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF0	UniProt:Q9CA61	SUPFAM:SSF48264	TMHMM:TMhelix
UniParc:UPI00000A159D	SEG:seg	:	:	:	:

Description

CYP98A8Cytochrome P450 98A8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA61]

Coordinates

chr1:+:28013180..28015049

Molecular Weight (calculated)

56744.3 Da

IEP (calculated)

8.360

GRAVY (calculated)

-0.137

Length

497 amino acids

Sequence
(BLAST)

001: MIIYLISLLP IIVATLMLYQ RWWRSNIPPG PKPKFLLGNL HQMKPLWTHS FSEWSETYGP IISVWIGSQL TVVVSSSDLA RQVLRDKDHQ LSNRHRIARM
101: TQTGTDLVWS DYSPHYVKLR KLCTLELFSL KSIENFRSLR EMEARSMVVS ILKDLMSNSG DDQERKPVIV RKYLAAVVLN TISRLMIGKE FGSEEGKEFK
201: AIVEKEHLLS GSGTILDHVW WLKWVSSWFF SDKEFLAHKD RRTKWFRGAI MVEEDIEIED HRGFVRKLLV LKEQKELSEE TVGGLVWNML TAGADTTAVV
301: IEWAMAEMIK CPTVQEKAQQ ELDSVVGSER LMTESDIPIL PYLQCVVKEA LRLHPSTPLM LPHKASETVW VGGYKVPKGA TVYVNVQAIG RDPANWINPY
401: EFRPERFLQE ETDVKGRDFR VLPFGSGRRM CPAAQLSMNL MTLVMGNLLH CFSWSSPVPG ERIDMSENPG LLCNMRTPLQ ALALPRAAAR AIPLPLD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.