CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68176	Canola	endoplasmic reticulum	98.19	98.19
Bra003795.1-P	Field mustard	mitochondrion	94.78	98.13
AT1G74540.1	Thale cress	endoplasmic reticulum	80.32	80.48
AT1G74550.1	Thale cress	endoplasmic reticulum	64.06	65.5
CDY14751	Canola	endoplasmic reticulum	48.59	47.64
CDY06955	Canola	endoplasmic reticulum	48.39	47.44
CDY35432	Canola	endoplasmic reticulum, extracellular, vacuole	48.19	47.24
CDX79965	Canola	endoplasmic reticulum, extracellular, vacuole	47.79	46.94
CDY22488	Canola	cytosol, mitochondrion	33.33	46.89
CDY23876	Canola	endoplasmic reticulum, extracellular	46.59	45.76
CDX69984	Canola	extracellular, golgi	32.33	31.51
CDX90022	Canola	cytosol	27.71	29.61
CDY15188	Canola	cytosol	26.91	29.19
CDY38002	Canola	cytosol	23.69	28.16
CDX99037	Canola	endoplasmic reticulum, extracellular	32.53	22.59

Protein Annotations

Gene3D:1.10.630.10	MapMan:21.6.1.2	GO:A0A078DEV8	EnsemblPlants:CDX85843	ProteinID:CDX85843	ProteinID:CDX85843.1
InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705	GO:GO:0020037
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00143627001	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF0	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI0004EC5749
SEG:seg	:	:	:	:	:

Description

BnaC06g22910D

Coordinates

chrLK031843:+:214342..215838

Molecular Weight (calculated)

56861.1 Da

IEP (calculated)

7.225

GRAVY (calculated)

-0.133

Length

498 amino acids

Sequence
(BLAST)

001: MVLYLIISVI TIIITTNMLY QRWWASNIPP GPKPRFLLGN IHQLKPHWTH SFSEWSETYG PIISVWFGTN LSVVVSSSDL AKQVLKDNDH HLCNRERVAK
101: MTQSGHDLVW SDYSPHYVKL RKLCTLELFS LKSIESFRSL REMETRSMVE SVYKDVMIDS TDDQTRKPVV VRKYLAAVVL NTISKLMIGK EFSTEEGKEF
201: KEIVHKEHYL SGSGSLLDVI WWLKWVSKWL VSDKDFLAHM DRRTKWFRGA IMVEEDVAVE DHEGFVRKLL VLKENKELSE ETVHGLIWNM FTAGSDTTAV
301: VLEWAMAEMI RCPNVQRKAQ QELDAVVGSE RLMTEADIPK LPYLQCVVKE ALRLHPSTPT MLPHKASETV WLGGYTVPKG TTVYVHVKEI GRDPVNWINP
401: EEFRPERFLL EDTDVKGRDF RVLPFGSGRR VCPAAQLSMN LMALVMGNLL QCFSWSSPIP PETIDMSEIP GLLCVMKTPV EALASPRAAT RAISLNMG

Best Arabidopsis Sequence Match ( AT1G74540.1 )
(BLAST)

001: MIIYLISLLP IIVATLMLYQ RWWRSNIPPG PKPKFLLGNL HQMKPLWTHS FSEWSETYGP IISVWIGSQL TVVVSSSDLA RQVLRDKDHQ LSNRHRIARM
101: TQTGTDLVWS DYSPHYVKLR KLCTLELFSL KSIENFRSLR EMEARSMVVS ILKDLMSNSG DDQERKPVIV RKYLAAVVLN TISRLMIGKE FGSEEGKEFK
201: AIVEKEHLLS GSGTILDHVW WLKWVSSWFF SDKEFLAHKD RRTKWFRGAI MVEEDIEIED HRGFVRKLLV LKEQKELSEE TVGGLVWNML TAGADTTAVV
301: IEWAMAEMIK CPTVQEKAQQ ELDSVVGSER LMTESDIPIL PYLQCVVKEA LRLHPSTPLM LPHKASETVW VGGYKVPKGA TVYVNVQAIG RDPANWINPY
401: EFRPERFLQE ETDVKGRDFR VLPFGSGRRM CPAAQLSMNL MTLVMGNLLH CFSWSSPVPG ERIDMSENPG LLCNMRTPLQ ALALPRAAAR AIPLPLD

Arabidopsis Description

CYP98A8Cytochrome P450 98A8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA61]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.