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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69984 Canola extracellular, golgi 70.99 99.61
Bra009312.1-P Field mustard extracellular, golgi 70.71 99.22
AT5G07990.1 Thale cress endoplasmic reticulum, golgi 63.6 88.89
PGSC0003DMT400063351 Potato endoplasmic reticulum 45.33 71.43
VIT_17s0000g07210.t01 Wine grape extracellular, golgi 48.12 67.78
Solyc03g115220.2.1 Tomato extracellular, golgi 48.12 67.12
KRH54673 Soybean extracellular, plasma membrane 47.28 66.08
KRH03119 Soybean endoplasmic reticulum 40.86 64.82
KRH56827 Soybean endoplasmic reticulum, plasma membrane, plastid 43.93 61.4
KRH56828 Soybean endoplasmic reticulum, plasma membrane 43.65 61.13
KRH56830 Soybean endoplasmic reticulum 42.4 59.49
VIT_17s0000g07200.t01 Wine grape cytosol, mitochondrion 37.24 59.2
Zm00001d017077_P001 Maize endoplasmic reticulum 41.56 57.86
EES05356 Sorghum endoplasmic reticulum, golgi 41.56 57.64
EES05361 Sorghum endoplasmic reticulum, extracellular 41.56 57.64
Os10t0320100-01 Rice plasma membrane 42.12 57.41
GSMUA_Achr3P30350_001 Banana endoplasmic reticulum 36.54 57.33
OQU85240 Sorghum endoplasmic reticulum, golgi 38.08 56.99
TraesCS1B01G476400.1 Wheat endoplasmic reticulum 39.89 55.0
TraesCS1A01G442300.1 Wheat endoplasmic reticulum, extracellular 39.89 54.89
KXG30541 Sorghum plastid 41.98 54.33
HORVU1Hr1G094880.5 Barley endoplasmic reticulum, plasma membrane 40.17 53.53
TraesCS7D01G404900.1 Wheat endoplasmic reticulum, extracellular 38.91 53.04
TraesCS2B01G613200.1 Wheat endoplasmic reticulum 38.35 52.99
Zm00001d010521_P001 Maize endoplasmic reticulum 39.33 52.71
TraesCS1A01G442200.1 Wheat endoplasmic reticulum, plasma membrane 36.4 52.62
TraesCS1D01G450100.1 Wheat endoplasmic reticulum, golgi, mitochondrion 39.89 52.57
TraesCS6D01G015200.1 Wheat endoplasmic reticulum 38.08 52.5
TraesCS7B01G310900.1 Wheat endoplasmic reticulum, extracellular 38.49 52.27
EES18344 Sorghum endoplasmic reticulum, plasma membrane 38.91 52.15
Os10t0317900-01 Rice plasma membrane 38.77 51.96
TraesCS6A01G012600.1 Wheat endoplasmic reticulum, extracellular 37.66 51.82
TraesCS6B01G018800.1 Wheat endoplasmic reticulum, extracellular 37.24 51.15
TraesCS7A01G411700.1 Wheat mitochondrion 38.35 50.55
HORVU6Hr1G002400.2 Barley golgi, peroxisome 37.1 49.81
CDY15188 Canola cytosol 23.71 37.04
CDY22488 Canola cytosol, mitochondrion 18.27 37.01
CDX90022 Canola cytosol 23.71 36.48
CDY14751 Canola endoplasmic reticulum 25.52 36.02
CDY06955 Canola endoplasmic reticulum 25.38 35.83
CDY35432 Canola endoplasmic reticulum, extracellular, vacuole 25.1 35.43
CDX79965 Canola endoplasmic reticulum, extracellular, vacuole 24.97 35.31
Zm00001d050955_P002 Maize endoplasmic reticulum, extracellular 41.98 35.2
CDY23876 Canola endoplasmic reticulum, extracellular 24.69 34.91
CDY38002 Canola cytosol 19.94 34.13
CDX85843 Canola endoplasmic reticulum 22.59 32.53
CDX68176 Canola endoplasmic reticulum 22.32 32.13
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13GO:A0A078EDE4EnsemblPlants:CDX99037ProteinID:CDX99037ProteinID:CDX99037.1
InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152GO:GO:0016705GO:GO:0020037
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00107166001InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463
ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF104SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0004EE33E5
SEG:seg:::::
Description
BnaC09g47980D
Coordinates
chrLK031907:+:1255506..1262564
Molecular Weight (calculated)
79361.2 Da
IEP (calculated)
6.516
GRAVY (calculated)
-0.142
Length
717 amino acids
Sequence
(BLAST)
001: MTNLYLTILL PTFIFLIVLV LSRRRNNRLP PGPNPWPIIG NLPHMGPKPH QTLAAMVTTY GPILHLRLGF ADVVVAASKS VAEQFLKVHD ANFASRPPNS
101: GAKHMAYNYQ DLVFAPYGQR WRMLRKISSV HLFSAKALED FKHVRQEEVG TLMRELARAN TKPVNLGQLV NMCVLNALGR EMIGRRLFGA DADHKAEEFR
201: SMVTEMMALA GVFNIGDFVP ALDCLDLQGV AGKMKRLHKR FDAFLSSILE EHEAMKNGQD QKHTDMLSTL ISLKGTDFDG EGGTLTDTEI KALLLNMFTA
301: GTDTSASTVD WAIAELIRHP EIMRKAQEEL DSVVGRGRPI NESDLSQLPY LQEEVGTLMR ELARANTKPV NLGQLVNMCV LNALGREMIG RRLFGADADH
401: KAEEFRSMVT EMMALAGVFN IGDFVPALDC LDLQGVAGKM KRLHKRFDAF LSSILEEHET MKNGQDQKHT DMLSTLISLK GTDFDGEGGT LTDTEIKALL
501: LNMFTAGTDT SASTVDWAIA ELIRHPEIMR KAQEELDSVV GRGRPINESD LSQLPYLQAV IKENFRLHPP TPLSLPHIAS ESCEINGYHI PKGSTLLTNI
601: WAIARDPDQW TDPLSFRPER FLPGGEKAGV DVKGNDFELI PFGAGRRICA GLSLGLRTIQ LLTATLVHGF EWELAGGVTP EKLNMEETYG ITLQRAVPLV
701: VHPKPRLDMS AYGLGSA
Best Arabidopsis Sequence Match ( AT5G07990.1 )
(BLAST)
001: MATLFLTILL ATVLFLILRI FSHRRNRSHN NRLPPGPNPW PIIGNLPHMG TKPHRTLSAM VTTYGPILHL RLGFVDVVVA ASKSVAEQFL KIHDANFASR
101: PPNSGAKHMA YNYQDLVFAP YGHRWRLLRK ISSVHLFSAK ALEDFKHVRQ EEVGTLTREL VRVGTKPVNL GQLVNMCVVN ALGREMIGRR LFGADADHKA
201: DEFRSMVTEM MALAGVFNIG DFVPSLDWLD LQGVAGKMKR LHKRFDAFLS SILKEHEMNG QDQKHTDMLS TLISLKGTDL DGDGGSLTDT EIKALLLNMF
301: TAGTDTSAST VDWAIAELIR HPDIMVKAQE ELDIVVGRDR PVNESDIAQL PYLQAVIKEN FRLHPPTPLS LPHIASESCE INGYHIPKGS TLLTNIWAIA
401: RDPDQWSDPL AFKPERFLPG GEKSGVDVKG SDFELIPFGA GRRICAGLSL GLRTIQFLTA TLVQGFDWEL AGGVTPEKLN MEESYGLTLQ RAVPLVVHPK
501: PRLAPNVYGL GSG
Arabidopsis Description
CYP75B1TT7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNZ9]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.