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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d010521_P001 Maize endoplasmic reticulum 87.48 87.48
TraesCS7D01G404900.1 Wheat endoplasmic reticulum, extracellular 80.0 81.37
TraesCS7B01G310900.1 Wheat endoplasmic reticulum, extracellular 78.88 79.92
TraesCS7A01G411700.1 Wheat mitochondrion 80.0 78.68
Os10t0317900-01 Rice plasma membrane 77.57 77.57
TraesCS6D01G015200.1 Wheat endoplasmic reticulum 74.77 76.92
TraesCS6B01G018800.1 Wheat endoplasmic reticulum, extracellular 74.58 76.44
TraesCS6A01G012600.1 Wheat endoplasmic reticulum, extracellular 74.21 76.2
HORVU6Hr1G002400.2 Barley golgi, peroxisome 74.02 74.16
EES05361 Sorghum endoplasmic reticulum, extracellular 64.49 66.73
OQU85240 Sorghum endoplasmic reticulum, golgi 59.25 66.18
EES05356 Sorghum endoplasmic reticulum, golgi 63.74 65.96
KXG30541 Sorghum plastid 65.23 63.0
GSMUA_Achr3P30350_001 Banana endoplasmic reticulum 52.34 61.27
PGSC0003DMT400063351 Potato endoplasmic reticulum 51.03 60.0
VIT_17s0000g07210.t01 Wine grape extracellular, golgi 54.77 57.56
Solyc03g115220.2.1 Tomato extracellular, golgi 54.77 57.0
Bra009312.1-P Field mustard extracellular, golgi 52.15 54.6
KRH54673 Soybean extracellular, plasma membrane 52.34 54.58
CDX69984 Canola extracellular, golgi 51.96 54.4
AT5G07990.1 Thale cress endoplasmic reticulum, golgi 51.78 54.0
KRH03119 Soybean endoplasmic reticulum 43.55 51.55
VIT_17s0000g07200.t01 Wine grape cytosol, mitochondrion 42.62 50.55
KRH56827 Soybean endoplasmic reticulum, plasma membrane, plastid 48.04 50.1
KRH56828 Soybean endoplasmic reticulum, plasma membrane 47.66 49.8
KRH56830 Soybean endoplasmic reticulum 47.29 49.51
OQU92546 Sorghum endoplasmic reticulum, plasma membrane 40.75 41.37
EER94806 Sorghum endoplasmic reticulum, plasma membrane 40.93 41.17
EER94825 Sorghum endoplasmic reticulum, plastid 40.37 40.68
OQU92580 Sorghum endoplasmic reticulum 36.45 40.12
EER94824 Sorghum endoplasmic reticulum, plastid 39.25 39.7
EER98974 Sorghum endoplasmic reticulum 38.69 39.66
EER95901 Sorghum endoplasmic reticulum 40.0 39.56
OQU79915 Sorghum endoplasmic reticulum, plastid 38.5 39.46
EER98011 Sorghum endoplasmic reticulum, plastid 39.63 39.33
EER98975 Sorghum plastid 38.13 39.16
OQU79385 Sorghum endoplasmic reticulum 39.44 39.15
CDX99037 Canola endoplasmic reticulum, extracellular 52.15 38.91
KXG25275 Sorghum endoplasmic reticulum, plastid 39.25 38.89
EER98976 Sorghum endoplasmic reticulum 37.38 38.68
EER95892 Sorghum plastid 38.32 38.68
EER96795 Sorghum endoplasmic reticulum 37.38 38.61
EER94822 Sorghum endoplasmic reticulum 38.5 38.36
OQU80592 Sorghum endoplasmic reticulum, golgi 36.45 37.36
EES18431 Sorghum endoplasmic reticulum 35.33 36.91
EES03767 Sorghum endoplasmic reticulum, extracellular 34.02 35.48
EES14499 Sorghum endoplasmic reticulum, golgi 30.47 30.99
Protein Annotations
Gene3D:1.10.630.10EntrezGene:8072541MapMan:9.2.2.4.1UniProt:C5YZ90InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EES18344ProteinID:EES18344ProteinID:EES18344.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016705
GO:GO:0016709GO:GO:0019748GO:GO:0020037GO:GO:0044550GO:GO:0046872GO:GO:0055114
InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298
PANTHER:PTHR24298:SF72EnsemblPlantsGene:SORBI_3009G162500SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0001A888EFRefSeq:XP_002439914.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr9:+:51943205..51948939
Molecular Weight (calculated)
58433.9 Da
IEP (calculated)
6.363
GRAVY (calculated)
0.035
Length
535 amino acids
Sequence
(BLAST)
001: MVMELVLATP DLPTPLLLSA LTVAVSVAVC YVLFWKQQQA AARRAPLPPG PRGWPVLGNL PQLGGKTHQT LHELTKVYGP LLRLRFGSSD VVVAGSAAVA
101: EQFLRVHDAN FSCRPPNSGG ELMAYNYQDV VFAPYGPRWR AMRKVCAVNL FSARALDDIC DVREREAALM VRSLAEQAAR DRNTPVALGK AVNVCTTNAL
201: SRAAVGRRVF AAAGAGDEGA REFKEIVLEV MEVGGVLNVG DFVPALRWLD PQGVVGRMKK LHRRFDDMMN GIIADSRKAR ATPADGEESK DLLGLLLSMV
301: EDEGSDDEVR ITETDVKALI LNLFIAGTDT TSTIAEWSLA ELIRHPDILK QAQEELDTVV GRGRLVTESD LRHLTFFNAV IKETFRLHPS TPLSLPRMAA
401: EECEIAGYSI PKGCELLVNV WGIARDPALW PDPLEFRPAR FLPGGSHSDV DVKGGNFGLI PFGAGRRICA GLSWGLRMVT LTSATLVHAF DWELPVGQTP
501: DKLNMEEAFT LLLQRAVPLM AHPIPRLLPS AYEIA
Best Arabidopsis Sequence Match ( AT5G07990.1 )
(BLAST)
001: MATLFLTILL ATVLFLILRI FSHRRNRSHN NRLPPGPNPW PIIGNLPHMG TKPHRTLSAM VTTYGPILHL RLGFVDVVVA ASKSVAEQFL KIHDANFASR
101: PPNSGAKHMA YNYQDLVFAP YGHRWRLLRK ISSVHLFSAK ALEDFKHVRQ EEVGTLTREL VRVGTKPVNL GQLVNMCVVN ALGREMIGRR LFGADADHKA
201: DEFRSMVTEM MALAGVFNIG DFVPSLDWLD LQGVAGKMKR LHKRFDAFLS SILKEHEMNG QDQKHTDMLS TLISLKGTDL DGDGGSLTDT EIKALLLNMF
301: TAGTDTSAST VDWAIAELIR HPDIMVKAQE ELDIVVGRDR PVNESDIAQL PYLQAVIKEN FRLHPPTPLS LPHIASESCE INGYHIPKGS TLLTNIWAIA
401: RDPDQWSDPL AFKPERFLPG GEKSGVDVKG SDFELIPFGA GRRICAGLSL GLRTIQFLTA TLVQGFDWEL AGGVTPEKLN MEESYGLTLQ RAVPLVVHPK
501: PRLAPNVYGL GSG
Arabidopsis Description
CYP75B1TT7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNZ9]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.