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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:
  • plastid 5
  • extracellular 3
  • endoplasmic reticulum 6
  • vacuole 3
  • plasma membrane 3
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER94824 Sorghum endoplasmic reticulum, plastid 89.64 89.98
Zm00001d029241_P001 Maize endoplasmic reticulum 85.88 87.02
EER94822 Sorghum endoplasmic reticulum 67.42 66.67
EER98976 Sorghum endoplasmic reticulum 62.52 64.22
EER96795 Sorghum endoplasmic reticulum 62.52 64.09
OQU92580 Sorghum endoplasmic reticulum 58.38 63.79
EER95901 Sorghum endoplasmic reticulum 64.22 63.03
EER98975 Sorghum plastid 61.77 62.96
OQU79915 Sorghum endoplasmic reticulum, plastid 60.45 61.49
EER98974 Sorghum endoplasmic reticulum 56.5 57.47
OQU80592 Sorghum endoplasmic reticulum, golgi 55.56 56.51
KXG25275 Sorghum endoplasmic reticulum, plastid 56.87 55.93
EER95892 Sorghum plastid 50.47 50.57
EER98011 Sorghum endoplasmic reticulum, plastid 50.09 49.35
OQU79385 Sorghum endoplasmic reticulum 48.59 47.87
EES05361 Sorghum endoplasmic reticulum, extracellular 40.49 41.59
EES05356 Sorghum endoplasmic reticulum, golgi 40.11 41.2
OQU85240 Sorghum endoplasmic reticulum, golgi 36.72 40.71
EES18344 Sorghum endoplasmic reticulum, plasma membrane 40.68 40.37
KXG30541 Sorghum plastid 40.49 38.81
EES03767 Sorghum endoplasmic reticulum, extracellular 36.72 38.01
OQU92546 Sorghum endoplasmic reticulum, plasma membrane 37.1 37.38
EER94806 Sorghum endoplasmic reticulum, plasma membrane 37.1 37.03
EES18431 Sorghum endoplasmic reticulum 35.03 36.33
EES14499 Sorghum endoplasmic reticulum, golgi 35.97 36.31
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:8080798UniProt:C5WZL0InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EER94825ProteinID:EER94825ProteinID:EER94825.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016705
GO:GO:0016709GO:GO:0019748GO:GO:0020037GO:GO:0044550GO:GO:0046872GO:GO:0055114
InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298
PANTHER:PTHR24298:SF211EnsemblPlantsGene:SORBI_3001G364400SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0001A833DBRefSeq:XP_002467827.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr1:-:65332794..65339108
Molecular Weight (calculated)
58932.6 Da
IEP (calculated)
8.809
GRAVY (calculated)
-0.013
Length
531 amino acids
Sequence
(BLAST)
001: METELVVSFM GVVLATALLV VTVLRRKRCS SSSSSREYRL PPGPRPWPVI GNLNLLGSLP HRSIHALSAR HGPFMSLRFG SVPVVVGSSV DAARFFLKTN
101: DASFIDRPKM ASGKHTAYDY SDIVWSPYGA YWRQARKLWK ANLFNDRQLR SLEHVRSEEL RVLLRDLRAL SLSSSSSASA GRGGGVVALK EHLLMLSLNV
201: ISRMALGGKY VGEGGTAGSP ISPAEFRWMV DELFLLNGVF CVGDFIPWLS WLDIHGYVGR MKKLGKMFDR FLEHMVEEHS QRRRREGDKF VAADMVDLLL
301: ELADDPKLEV PIKRDGVKGF ALDLIAGGTD SSAVTIEWAM SELLRNPDVL SKATEELDGV VGRERLVTEQ DIPNLPYLEA IVKEAFRLHP VTPLLAPRLC
401: REDASTGSYD IPRGTLVFVN VWTIGRDPAV WGDDAEFFRP ERFVGSGVDV KGQDLELLPF GSGRRMCPGY VLGLKMVQVT LANLLHAFAW RLPDGVAPEK
501: LSMQEKFGLA VPRFVPLEAV AVPRLPAHLY A
Best Arabidopsis Sequence Match ( AT3G48270.1 )
(BLAST)
001: MMIMFFLLCS IIFVVTIIIF RKQKRGKKRN TLPSPPGLPL IGNLHQLGRH PHRSLCSLSH RYGPLMLLHF GRVPVLVVSS AELARDVLKT HDRVFASRPR
101: SKIFEKLLYD KHDVASAPYG EYWRQMKSVC VLHLFSNKMV RSFREVREEE ISLMMEKIRK SISLPVNLSK ILVSLTNDVI CKVALGRKYG GETDFKELME
201: RLNKLLGTFS VGSYVPWLAW IDWIRGLDCQ LEKTANDVDK FFERVVQDHV DGNRDMTDFV DVLLAIQRDK TVGFEINRVS IKAIVMNVFV GGTDTSSTLM
301: EWAMTELLRH PKCLKRLQEE VRTICKDKSS VSEEEIQNMS YLKAVIKEAL RLHPPLPLMV PHESTQDVRL GDHHIPAGTQ VLINAWAIGR EAATWGPDVE
401: EFRPERHLDS SVDYRGQAFE LIPFGSGRRI CPAISFAVVL NEVVLANLVH RFDWRLSVES TEDQTEVAES TGIAIHRMFP LYAIASNTT
Arabidopsis Description
CYP71A26Cytochrome P450 71A26 [Source:UniProtKB/Swiss-Prot;Acc:Q9STK7]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.