CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 3
endoplasmic reticulum 5
vacuole 3
plasma membrane 3
golgi 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98976	Sorghum	endoplasmic reticulum	73.32	73.89
EER96795	Sorghum	endoplasmic reticulum	72.94	73.36
Os09t0441700-00	Rice	plasma membrane	65.45	64.22
EER94824	Sorghum	endoplasmic reticulum, plastid	62.96	62.0
EER94825	Sorghum	endoplasmic reticulum, plastid	62.96	61.77
EER94822	Sorghum	endoplasmic reticulum	61.8	59.96
OQU80592	Sorghum	endoplasmic reticulum, golgi	59.69	59.58
KXG25275	Sorghum	endoplasmic reticulum, plastid	61.61	59.44
EER98974	Sorghum	endoplasmic reticulum	59.31	59.2
EER95901	Sorghum	endoplasmic reticulum	61.23	58.96
OQU92580	Sorghum	endoplasmic reticulum	53.55	57.41
OQU79915	Sorghum	endoplasmic reticulum, plastid	56.05	55.94
EER98011	Sorghum	endoplasmic reticulum, plastid	52.4	50.65
EER95892	Sorghum	plastid	50.86	50.0
OQU79385	Sorghum	endoplasmic reticulum	50.48	48.79
EES05356	Sorghum	endoplasmic reticulum, golgi	39.92	40.23
OQU85240	Sorghum	endoplasmic reticulum, golgi	36.85	40.08
EES05361	Sorghum	endoplasmic reticulum, extracellular	39.54	39.85
EES18344	Sorghum	endoplasmic reticulum, plasma membrane	39.16	38.13
KXG30541	Sorghum	plastid	39.73	37.36
OQU92546	Sorghum	endoplasmic reticulum, plasma membrane	36.66	36.24
EER94806	Sorghum	endoplasmic reticulum, plasma membrane	36.66	35.9
EES03767	Sorghum	endoplasmic reticulum, extracellular	34.55	35.09
EES18431	Sorghum	endoplasmic reticulum	33.97	34.57
EES14499	Sorghum	endoplasmic reticulum, golgi	33.21	32.89

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	EntrezGene:8062746	UniProt:C5XDQ3	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	EnsemblPlants:EER98975	ProteinID:EER98975	ProteinID:EER98975.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016705
GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298
PANTHER:PTHR24298:SF211	EnsemblPlantsGene:SORBI_3002G216200	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI0001A84111	RefSeq:XP_002462454.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:60829928..60832070

Molecular Weight (calculated)

59093.7 Da

IEP (calculated)

8.731

GRAVY (calculated)

-0.152

Length

521 amino acids

Sequence
(BLAST)

001: MELSAWASLS AVVLSTVLFL IGAIHARRRR RPSISNSLPG PKPWPVIGNF NLLGALPHRS LDALSKLHGP LMRVQFGSFP VVIASSVDMA RFFLKTHDSA
101: FIDRPKMAAG KYTTYNYSNI AWSPYGAYWR QARKICADEL FSARRLESLE HVRREEVHAL LRDLHGTAPG QVVQLKERLS TMSLNIIARM VLGRKCVENE
201: VVTSGGGSVT TWREFRWMLD ELFLLNGVLN VGDWIPWVSW LDLQGYVRRM KRVGRMFDRF MENVVEEHNE RRLREGDEFV PQDMVDRLLQ LADDPSLDVK
301: LTRDSVKAFT QDLVAGGTES AAVIVEWGIS ELMKNPDVFA KATEELDGVI GRDRWVTEKD MPRLPYMDAI VKETMRLHMV VPLLSPRLSR EDTSVGGRYD
401: IPAGTRVLIN AWTISRDPAL WDAPEEFWPE RFVGSKIDVK GQDFELLPFG SGRRMCPGYS LGLKVIQVTL VNLLHGFAWR LPDGMTKEEL SMEEVFGLST
501: PRKFPLQAVV EPKLPARLYT A

Best Arabidopsis Sequence Match ( AT4G31940.1 )
(BLAST)

001: MDTSLFSLFV PILVFVFIAL FKKSKKPKYV KAPAPSGAWP IIGHLHLLGG KEQLLYRTLG KMADHYGPAM SLQLGSNEAF VVSSFEVAKD CFTVNDKALA
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV

Arabidopsis Description

CYP82C4Cytochrome P450 82C4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ46]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.