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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d018839_P001 Maize endoplasmic reticulum 87.17 87.01
EER98011 Sorghum endoplasmic reticulum, plastid 79.62 78.29
TraesCS5A01G064200.1 Wheat endoplasmic reticulum 76.23 75.8
TraesCS5B01G068500.1 Wheat endoplasmic reticulum 74.34 74.62
HORVU5Hr1G017360.1 Barley endoplasmic reticulum 74.53 74.11
TraesCS5D01G075000.1 Wheat endoplasmic reticulum, peroxisome, plastid 76.04 70.7
OQU79385 Sorghum endoplasmic reticulum 70.75 69.57
EER98976 Sorghum endoplasmic reticulum 52.08 53.38
EER96795 Sorghum endoplasmic reticulum 52.08 53.28
OQU92580 Sorghum endoplasmic reticulum 48.49 52.88
EER94822 Sorghum endoplasmic reticulum 51.89 51.21
EER98975 Sorghum plastid 50.0 50.86
EER94825 Sorghum endoplasmic reticulum, plastid 50.57 50.47
KXG25275 Sorghum endoplasmic reticulum, plastid 51.13 50.19
EER94824 Sorghum endoplasmic reticulum, plastid 49.81 49.91
OQU80592 Sorghum endoplasmic reticulum, golgi 48.11 48.85
EER95901 Sorghum endoplasmic reticulum 49.25 48.24
OQU79915 Sorghum endoplasmic reticulum, plastid 47.36 48.08
EER98974 Sorghum endoplasmic reticulum 46.98 47.7
Os03t0650200-00 Rice endoplasmic reticulum 44.91 40.48
EES05361 Sorghum endoplasmic reticulum, extracellular 39.25 40.23
EES05356 Sorghum endoplasmic reticulum, golgi 39.25 40.23
OQU85240 Sorghum endoplasmic reticulum, golgi 35.85 39.67
EES18344 Sorghum endoplasmic reticulum, plasma membrane 38.68 38.32
EES03767 Sorghum endoplasmic reticulum, extracellular 36.42 37.62
KXG30541 Sorghum plastid 39.06 37.36
OQU92546 Sorghum endoplasmic reticulum, plasma membrane 36.79 37.0
EER94806 Sorghum endoplasmic reticulum, plasma membrane 36.79 36.65
EES18431 Sorghum endoplasmic reticulum 34.53 35.74
EES14499 Sorghum endoplasmic reticulum, golgi 35.47 35.74
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:C5XA76InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfEnsemblPlants:EER95892ProteinID:EER95892ProteinID:EER95892.2GO:GO:0003674GO:GO:0003824
GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114InterPro:IPR036396PFAM:PF00067
PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF139EnsemblPlantsGene:SORBI_3002G040400
SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI00081ADD8DSEG:seg::
Description
hypothetical protein
Coordinates
chr2:-:3900660..3902719
Molecular Weight (calculated)
57761.7 Da
IEP (calculated)
7.759
GRAVY (calculated)
-0.036
Length
530 amino acids
Sequence
(BLAST)
001: MELTSTMTMA MALAAILAVF ALSSVASTRG RRRKALKLPP GPWGWPVLGN LDALAGALPP HRALAALAAR HGPLMHLRLG SYHTVVASSA DTARLVLKTH
101: DFAFADRPAT AAGAITSYGY LGIVHTPCGA YWRMARKLCA TELFSARRVD SFRRVRTQEM RALVRGLFEC RGAVAVREHV AGATMRNILR MAVGEKWSGC
201: YGSPEGEEFR RTLDEAFAAT GAMSNIGEWV PLLGRLDVLG FKRKMKRLRD LHDHFYEKIL VEHEERRRLA QAGGEFVASD LVDVLLERAD AEEGTQTQES
301: AEARLPRDGV KAFIQDIIAG GTESSAVTIE WAMSELLRHP EAMAAATAEL DRVVGSGRWV EERDLPELPY IDAVVKETLR LHPVGPLLVP HHAREDTVVA
401: GYDVPAGARV LVNAWAIARD PASWPDAPEA FRPERFLGGA AAAVDVRGAH FELLPFGSGR RICPAYDLAM KLVAAGVANL VHGFAWRLPD GVAPEDVSME
501: EHVGLSTRRK VPLVAVAEPR LPTHLYAATD
Best Arabidopsis Sequence Match ( AT2G45550.1 )
(BLAST)
001: MDIISGQALF LLFCFISSCF LISTTARSRR SSGRAATLPP GPPRLPIIGN IHQVGKNPHS SFADLAKIYG PIMSLKFGCL NSVVITSPEA AREVLRTHDQ
101: ILSGRKSNDS IRCFGHEEVS VIWLPPSSAR WRMLRKLSVT LMFSPQRTEA TKALRMKKVQ ELVSFMNESS ERKEAVDISR ASYTTVLNII SNILFSVDLG
201: SYDSKKSNEF QDTVIGAMEA AGKPDAANYF PFMGFLDLQG NRKAMRGLTE RLFRVFRGFM DAKIAEKSLG NYSKDVSNRD FLDSLLILNE GDEAELDNND
301: IEHLLLDMFT AGTDTSSSTL EWAMAELLRN PKTMVKAQAE MDRVLGQNSV VQESDISGLP YLQAVVKETF RLHPAAPLLV PRKAESDVEV LGFMVPKDTQ
401: VLVNVWAIGR DPSVWENPSQ FEPERFMGKD IDVKGRDYEL TPFGGGRRIC PGLPLAVKTV SLMLASLLYS FDWKLPNGVV SEDLDMDETF GITLHRTNTL
501: YAIPVKKQTI N
Arabidopsis Description
CYP76C4Cytochrome P450 76C4 [Source:UniProtKB/Swiss-Prot;Acc:O64635]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.