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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 7
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d007918_P001 Maize endoplasmic reticulum 88.31 85.92
EER95892 Sorghum plastid 78.29 79.62
TraesCS5A01G064200.1 Wheat endoplasmic reticulum 74.21 75.05
TraesCS5B01G068500.1 Wheat endoplasmic reticulum 72.54 74.05
HORVU5Hr1G017360.1 Barley endoplasmic reticulum 72.54 73.36
TraesCS5D01G075000.1 Wheat endoplasmic reticulum, peroxisome, plastid 74.4 70.35
OQU79385 Sorghum endoplasmic reticulum 69.02 69.02
EER98976 Sorghum endoplasmic reticulum 52.13 54.35
EER96795 Sorghum endoplasmic reticulum 52.13 54.25
EER98975 Sorghum plastid 50.65 52.4
EER94824 Sorghum endoplasmic reticulum, plastid 50.28 51.23
OQU92580 Sorghum endoplasmic reticulum 45.83 50.82
EER94825 Sorghum endoplasmic reticulum, plastid 49.35 50.09
EER94822 Sorghum endoplasmic reticulum 49.72 49.91
OQU79915 Sorghum endoplasmic reticulum, plastid 48.05 49.62
KXG25275 Sorghum endoplasmic reticulum, plastid 49.54 49.44
OQU80592 Sorghum endoplasmic reticulum, golgi 47.31 48.85
EER95901 Sorghum endoplasmic reticulum 48.98 48.8
EER98974 Sorghum endoplasmic reticulum 47.12 48.66
Os03t0650200-00 Rice endoplasmic reticulum 45.64 41.84
EES05361 Sorghum endoplasmic reticulum, extracellular 38.96 40.62
EES05356 Sorghum endoplasmic reticulum, golgi 38.4 40.04
EES18344 Sorghum endoplasmic reticulum, plasma membrane 39.33 39.63
OQU85240 Sorghum endoplasmic reticulum, golgi 34.88 39.25
OQU92546 Sorghum endoplasmic reticulum, plasma membrane 36.73 37.57
KXG30541 Sorghum plastid 38.59 37.55
EER94806 Sorghum endoplasmic reticulum, plasma membrane 36.55 37.03
EES03767 Sorghum endoplasmic reticulum, extracellular 35.06 36.84
EES14499 Sorghum endoplasmic reticulum, golgi 34.51 35.36
EES18431 Sorghum endoplasmic reticulum 33.21 34.96
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13EntrezGene:8081145UniProt:C5XA79InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EER98011ProteinID:EER98011ProteinID:EER98011.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0016020GO:GO:0016491GO:GO:0016705GO:GO:0016709
GO:GO:0019748GO:GO:0020037GO:GO:0044550GO:GO:0046872GO:GO:0055114InterPro:IPR036396
PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF139
EnsemblPlantsGene:SORBI_3002G040500SUPFAM:SSF48264SignalP:SignalP-noTMUniParc:UPI0001A8415FRefSeq:XP_002461490.1SEG:seg
Description
hypothetical protein
Coordinates
chr2:-:3910722..3912341
Molecular Weight (calculated)
57883.6 Da
IEP (calculated)
8.381
GRAVY (calculated)
-0.052
Length
539 amino acids
Sequence
(BLAST)
001: MSVAMALAAI LAAVYVLRYL LSPTPSGTGR PKSSSSLNLP PGPRGWPVIG SLGALAGALP PHRALAALAA RHGPLMHLRL GSYHTVVASS ADTARLVLKT
101: HDFAFADRPA TAAGEVASYG YLGIVHTPYG AYWRMARKLC ATELFSARRV DSFERVRAQE MRALARGLLA ECAGGAVAVR EHVAGATLRN ILRMAVGEKW
201: SGCYGSPEGE AFRRTLDEAF AVTGAVSNVG EWVPWLGWLD LQGCVRRMKR LRAQYDRFFE QILADHEKTR RRRGRPGAGG DDSAAGDDLV DVLLQLAEEH
301: ENRPEPGAGS GRLTRDGVKA FVQDIVAGGT ESSAVTIEWA MSELLRHPET MAAATAELDR VIGHGRWVNE SDLPSLPYVD AVVKETMRLH PVGPLLVPHH
401: AREDTVVAGY DVPSGARVLV NVWAIGRDPA SWPDAPGAFR PERFLSGGSG HGVDVRGAHF ELLPFGAGRR MCPACGLAMK LVAAGVANLV HGFAWRLPDG
501: MAPEDVSMEE QFGLSTRRKV PLVAVAEPRL PAHLYAAID
Best Arabidopsis Sequence Match ( AT3G26300.1 )
(BLAST)
001: MTNIWLLSLI FVICILVAVF NHKNRRNYQR TPPSPPGCPI IGNLHQLGEL PHQSLWKLSK KYGPVMLLKL GRVPTVIVSS SETAKQALKI HDLHCCSRPG
101: FAGARELSYN YLDIAFSPYD DYWKEVRKLA VQELFSSKQV HSIQPIKDEE VKKLIDSISE SAAQKTPINL NKTLLALTVS VVCRTAFSVN FEGTVLNSER
201: FNNIVREALE MLGSFSASDF IPYVGRIIDL LTGLQGRRER SMRDLDAFYE QMFDLHKQKK EEGSEDFVDL LLRLEKEEAV LGNDKLTRNH IKAILMDVLL
301: AGMDTSAITM TWAMAELAKN PRVMKKVQSE IRSQIKNKER ISFDDTDKLE YLKMVIKETW RLHPTTPLLI PREAMSEFEI NGYTIPVKTR LHVNVWAIGR
401: DPDTWKDPEV FLPERFTDNN IDAKGQHFEL LPFGGGRRMC PAVYMGTTMV EFGLANLLYH FDWKLPEGMK VDDIDMEEAP GLTVNKKNEL ILVPTKFLDP
Arabidopsis Description
CYP71B34Cytochrome P450 71B34 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIP6]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.